RNA–Protein interactions for RNA: ENST00000516381.1

SCARNA17.3-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 125 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.3-201ENST00000516381 NELL1Q92832 810 aa0.66□□□□□ -2.3
SCARNA17.3-201ENST00000516381 LENG9Q96B70 501 aa0.66□□□□□ -2.3
SCARNA17.3-201ENST00000516381 TOE1Q96GM8 510 aaKnown RBP0.66□□□□□ -2.3
SCARNA17.3-201ENST00000516381 NBPF4Q96M43 638 aa0.66□□□□□ -2.3
SCARNA17.3-201ENST00000516381 SETDB2Q96T68 719 aa0.66□□□□□ -2.3
SCARNA17.3-201ENST00000516381 WACQ9BTA9 647 aa0.66□□□□□ -2.3
SCARNA17.3-201ENST00000516381 VPS33BQ9H267 617 aa0.66□□□□□ -2.3
SCARNA17.3-201ENST00000516381 MTMR4Q9NYA4 1195 aa0.66□□□□□ -2.3
SCARNA17.3-201ENST00000516381 ZNF70Q9UC06 446 aaPredicted RBP0.66□□□□□ -2.3
SCARNA17.3-201ENST00000516381 EGFL7Q9UHF1 273 aa0.66□□□□□ -2.3
SCARNA17.3-201ENST00000516381 NR2E1Q9Y466 385 aa0.66□□□□□ -2.3
SCARNA17.3-201ENST00000516381 INSL6Q9Y581 213 aa0.66□□□□□ -2.3
SCARNA17.3-201ENST00000516381 TCF20Q9UGU0 1960 aaKnown RBP0.66□□□□□ -2.3
SCARNA17.3-201ENST00000516381 WDR91A4D1P6 747 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 C7orf72A4D263 438 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 ANKRD33BA6NCL7 494 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 H3BNC9 293 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 SUPT5HO00267 1087 aaKnown RBP0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 TRAF5O00463 557 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 CYP27B1O15528 508 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 ABHD16AO95870 558 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 LRG1P02750 347 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 CHGBP05060 677 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 ITGB1P05556 798 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 IGKV2-30P06310 120 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 TYRP1P17643 537 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 NR4A1P22736 598 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 TKTP29401 623 aaKnown RBP0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 SLC6A11P48066 632 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 RRADP55042 308 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 ELLP55199 621 aaPredicted RBP0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 ZNF445P59923 1031 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 FHL3Q13643 280 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 DSC3Q14574 896 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 SMAD2Q15796 467 aaKnown RBP0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 TBR1Q16650 682 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 LCE3AQ5TA76 89 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 EEF1DP3Q658K8 133 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 RCSD1Q6JBY9 416 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 Q6YL49 198 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 ADGRE4PQ86SQ3 457 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 TEX2Q8IWB9 1127 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 GPR135Q8IZ08 494 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 C7orf61Q8IZ16 206 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 ZNF276Q8N554 614 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 ARRDC4Q8NCT1 418 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 SIMC1Q8NDZ2 872 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 ADAMTS15Q8TE58 950 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 THAP3Q8WTV1 239 aaPredicted RBP0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 FRS2Q8WU20 508 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 GATAD2BQ8WXI9 593 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 CFHR4Q92496 578 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 DPF3Q92784 378 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 BRF1Q92994 677 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 RGMAQ96B86 450 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 WBP1Q96G27 269 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 TMEM176AQ96HP8 235 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 SLC6A18Q96N87 628 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 MCMBPQ9BTE3 642 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 CARD11Q9BXL7 1154 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 C12orf49Q9H741 205 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 DTLQ9NZJ0 730 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 MARCH2Q9P0N8 246 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 GMIPQ9P107 970 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 MDFICQ9P1T7 246 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 FAM8A1Q9UBU6 413 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 HS3ST4Q9Y661 456 aa0.65□□□□□ -2.31
SCARNA17.3-201ENST00000516381 CCDC187A0A096LP49 1063 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 NPHP3-ACAD11A0A0J9YXS1 232 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 TCRBV5S2A0A599 114 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 TMEM88BA6NKF7 163 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 C9IYK1 514 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 C22orf46C9J442 243 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 STXBP3O00186 592 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 GIPC1O14908 333 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 NPHS1O60500 1241 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 FBXO21O94952 628 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 MATN4O95460 622 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 NTN1O95631 604 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 BMP15O95972 392 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 F13A1P00488 732 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 CKMP06732 381 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 THBDP07204 575 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 CCNFP41002 786 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 GLRBP48167 497 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 SERPINB4P48594 390 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 FOXG1P55316 489 aaPredicted RBP0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 NHLH1Q02575 133 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 SRSF4Q08170 494 aaKnown RBP0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 HYAL1Q12794 435 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 NFYCQ13952 458 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 CNGB1Q14028 1251 aaPredicted RBP0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 MLECQ14165 292 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 KRT71Q3SY84 523 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 ZMAT1Q5H9K5 638 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 NOL9Q5SY16 702 aaKnown RBP0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 MBLAC2Q68D91 279 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 HEATR6Q6AI08 1181 aaKnown RBP0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 OVOS1Q6IE37 1185 aa0.64□□□□□ -2.31
SCARNA17.3-201ENST00000516381 KCNV1Q6PIU1 500 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms