RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 PPP1R12CQ9BZL4 782 aa22.11■■□□□ 1.13
LMNA-225ENST00000515824 KCNH7Q9NS40 1196 aa22.11■■□□□ 1.13
LMNA-225ENST00000515824 STK36Q9NRP7 1315 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 MYH7BA7E2Y1 1941 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 CYP3A4P08684 503 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 XBP1P17861 261 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 RBM25P49756 843 aaKnown RBP22.1■■□□□ 1.13
LMNA-225ENST00000515824 FPGSQ05932 587 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 KIAA0753Q2KHM9 967 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 GALNT17Q6IS24 598 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 SESTD1Q86VW0 696 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 TMEM199Q8N511 208 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 NECAB1Q8N987 351 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 CYP2W1Q8TAV3 490 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 GTF3C6Q969F1 213 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 GPR20Q99678 358 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 HIPK3Q9H422 1215 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 PKD2L1Q9P0L9 805 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 PCDHA4Q9UN74 947 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 SCN10AQ9Y5Y9 1956 aa22.1■■□□□ 1.13
LMNA-225ENST00000515824 HAS3O00219 553 aa22.09■■□□□ 1.13
LMNA-225ENST00000515824 MEIS1O00470 390 aa22.09■■□□□ 1.13
LMNA-225ENST00000515824 ADAMTS3O15072 1205 aa22.09■■□□□ 1.13
LMNA-225ENST00000515824 SP4Q02446 784 aa22.09■■□□□ 1.13
LMNA-225ENST00000515824 NIPA1Q7RTP0 329 aa22.09■■□□□ 1.13
LMNA-225ENST00000515824 RASGRP4Q8TDF6 673 aa22.09■■□□□ 1.13
LMNA-225ENST00000515824 PPP1R13LQ8WUF5 828 aa22.09■■□□□ 1.13
LMNA-225ENST00000515824 WASF1Q92558 559 aa22.09■■□□□ 1.13
LMNA-225ENST00000515824 AIFM3Q96NN9 605 aa22.09■■□□□ 1.13
LMNA-225ENST00000515824 C16orf70Q9BSU1 422 aa22.09■■□□□ 1.13
LMNA-225ENST00000515824 LIMCH1Q9UPQ0 1083 aa22.09■■□□□ 1.13
LMNA-225ENST00000515824 NOD1Q9Y239 953 aa22.09■■□□□ 1.13
LMNA-225ENST00000515824 TRIOBPQ9H2D6 2365 aa22.09■■□□□ 1.13
LMNA-225ENST00000515824 H3BRB1 525 aa22.08■■□□□ 1.13
LMNA-225ENST00000515824 CTDNEP1O95476 244 aa22.08■■□□□ 1.13
LMNA-225ENST00000515824 LGALS2P05162 132 aa22.08■■□□□ 1.13
LMNA-225ENST00000515824 CYP2C9P11712 490 aa22.08■■□□□ 1.13
LMNA-225ENST00000515824 BLIDQ8IZY5 108 aa22.08■■□□□ 1.13
LMNA-225ENST00000515824 CRYGNQ8WXF5 182 aa22.08■■□□□ 1.13
LMNA-225ENST00000515824 SEPT1Q8WYJ6 367 aa22.08■■□□□ 1.13
LMNA-225ENST00000515824 KIF2CQ99661 725 aa22.08■■□□□ 1.13
LMNA-225ENST00000515824 SDF4Q9BRK5 362 aa22.08■■□□□ 1.13
LMNA-225ENST00000515824 TUT1Q9H6E5 874 aaKnown RBP22.08■■□□□ 1.13
LMNA-225ENST00000515824 ORC3Q9UBD5 711 aaPredicted RBP22.08■■□□□ 1.13
LMNA-225ENST00000515824 HDAC6Q9UBN7 1215 aa22.08■■□□□ 1.13
LMNA-225ENST00000515824 LARGE1O95461 756 aa22.07■■□□□ 1.12
LMNA-225ENST00000515824 ARP10275 920 aa22.07■■□□□ 1.12
LMNA-225ENST00000515824 CYP2C18P33260 490 aa22.07■■□□□ 1.12
LMNA-225ENST00000515824 PPIGQ13427 754 aaKnown RBP eCLIP22.07■■□□□ 1.123e-17■■□□□ 12
LMNA-225ENST00000515824 PTGISQ16647 500 aa22.07■■□□□ 1.12
LMNA-225ENST00000515824 PLA2G4DQ86XP0 818 aa22.07■■□□□ 1.12
LMNA-225ENST00000515824 NOC4LQ9BVI4 516 aaKnown RBP22.07■■□□□ 1.12
LMNA-225ENST00000515824 AGO4Q9HCK5 861 aaKnown RBP22.07■■□□□ 1.12
LMNA-225ENST00000515824 GTF2IRD1Q9UHL9 959 aa22.07■■□□□ 1.12
LMNA-225ENST00000515824 ZNF215Q9UL58 517 aaPredicted RBP22.07■■□□□ 1.12
LMNA-225ENST00000515824 FAM86B1E9PN63 330 aa22.06■■□□□ 1.12
LMNA-225ENST00000515824 FAM86B2P0C5J1 330 aa22.06■■□□□ 1.12
LMNA-225ENST00000515824 FXR1P51114 621 aaKnown RBP eCLIP22.06■■□□□ 1.125e-7■■■■□ 19.8
LMNA-225ENST00000515824 UTP14CQ5TAP6 766 aaKnown RBP22.06■■□□□ 1.12
LMNA-225ENST00000515824 GDF6Q6KF10 455 aaPredicted RBP22.06■■□□□ 1.12
LMNA-225ENST00000515824 DAGLBQ8NCG7 672 aa22.06■■□□□ 1.12
LMNA-225ENST00000515824 JPH1Q9HDC5 661 aaPredicted RBP22.06■■□□□ 1.12
LMNA-225ENST00000515824 SLC9A2Q9UBY0 812 aa22.06■■□□□ 1.12
LMNA-225ENST00000515824 LTBP2Q14767 1821 aa22.06■■□□□ 1.12
LMNA-225ENST00000515824 NFASCO94856 1347 aa22.06■■□□□ 1.12
LMNA-225ENST00000515824 TCF7P36402 384 aaPredicted RBP22.05■■□□□ 1.12
LMNA-225ENST00000515824 USP11P51784 963 aa22.05■■□□□ 1.12
LMNA-225ENST00000515824 BFSP2Q13515 415 aa22.05■■□□□ 1.12
LMNA-225ENST00000515824 SHHQ15465 462 aa22.05■■□□□ 1.12
LMNA-225ENST00000515824 LRIT3Q3SXY7 679 aa22.05■■□□□ 1.12
LMNA-225ENST00000515824 ZSCAN31Q96LW9 406 aaPredicted RBP22.05■■□□□ 1.12
LMNA-225ENST00000515824 KCNJ14Q9UNX9 436 aa22.05■■□□□ 1.12
LMNA-225ENST00000515824 TELO2Q9Y4R8 837 aa22.05■■□□□ 1.12
LMNA-225ENST00000515824 GSTTP1A0A1W2PQM5 241 aa22.04■■□□□ 1.12
LMNA-225ENST00000515824 CSF2RAP15509 400 aa22.04■■□□□ 1.12
LMNA-225ENST00000515824 CIITAP33076 1130 aa22.04■■□□□ 1.12
LMNA-225ENST00000515824 CCL23P55773 120 aa22.04■■□□□ 1.12
LMNA-225ENST00000515824 SETQ01105 290 aaPredicted RBP22.04■■□□□ 1.12
LMNA-225ENST00000515824 RABEP1Q15276 862 aa22.04■■□□□ 1.12
LMNA-225ENST00000515824 RETREG2Q8NC44 543 aa22.04■■□□□ 1.12
LMNA-225ENST00000515824 NSUN7Q8NE18 718 aaKnown RBP22.04■■□□□ 1.12
LMNA-225ENST00000515824 IL27Q8NEV9 243 aa22.04■■□□□ 1.12
LMNA-225ENST00000515824 PHF20Q9BVI0 1012 aa22.04■■□□□ 1.12
LMNA-225ENST00000515824 GTF3C3Q9Y5Q9 886 aa22.04■■□□□ 1.12
LMNA-225ENST00000515824 UMODL1Q5DID0 1318 aa22.04■■□□□ 1.12
LMNA-225ENST00000515824 IGLV3-22A0A075B6J6 115 aa22.03■■□□□ 1.12
LMNA-225ENST00000515824 DTNBO60941 627 aa22.03■■□□□ 1.12
LMNA-225ENST00000515824 FDPSP14324 419 aaKnown RBP22.03■■□□□ 1.12
LMNA-225ENST00000515824 EPHB4P54760 987 aa22.03■■□□□ 1.12
LMNA-225ENST00000515824 C9orf50Q5SZB4 431 aa22.03■■□□□ 1.12
LMNA-225ENST00000515824 CCDC155Q8N6L0 562 aa22.03■■□□□ 1.12
LMNA-225ENST00000515824 CAGE1Q8TC20 777 aa22.03■■□□□ 1.12
LMNA-225ENST00000515824 TBCKQ8TEA7 893 aa22.03■■□□□ 1.12
LMNA-225ENST00000515824 C17orf102A2RUQ5 167 aa22.02■■□□□ 1.12
LMNA-225ENST00000515824 M0R2N6 131 aa22.02■■□□□ 1.12
LMNA-225ENST00000515824 IPO5O00410 1097 aaKnown RBP22.02■■□□□ 1.12
LMNA-225ENST00000515824 PITPNM1O00562 1244 aa22.02■■□□□ 1.12
LMNA-225ENST00000515824 GNAT1P11488 350 aa22.02■■□□□ 1.12
LMNA-225ENST00000515824 ITGB3BPQ13352 177 aaPredicted RBP22.02■■□□□ 1.12
LMNA-225ENST00000515824 NPY5RQ15761 445 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms