RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 TC2NQ8N9U0 490 aa17.21■□□□□ 0.35
THUMPD3-210ENST00000515662 WNK4Q96J92 1243 aa17.21■□□□□ 0.35
THUMPD3-210ENST00000515662 ZFP91Q96JP5 570 aaPredicted RBP17.21■□□□□ 0.35
THUMPD3-210ENST00000515662 EIF2AK1Q9BQI3 630 aaKnown RBP17.21■□□□□ 0.35
THUMPD3-210ENST00000515662 PANK4Q9NVE7 773 aa17.21■□□□□ 0.35
THUMPD3-210ENST00000515662 DNM3Q9UQ16 869 aa17.21■□□□□ 0.35
THUMPD3-210ENST00000515662 USP27XA6NNY8 438 aa17.21■□□□□ 0.34
THUMPD3-210ENST00000515662 ARP10275 920 aa17.21■□□□□ 0.34
THUMPD3-210ENST00000515662 YBX3P16989 372 aaKnown RBP eCLIP17.21■□□□□ 0.349e-6■□□□□ 10.4
THUMPD3-210ENST00000515662 ARSHQ5FYA8 562 aa17.21■□□□□ 0.34
THUMPD3-210ENST00000515662 CREBRFQ8IUR6 639 aa17.21■□□□□ 0.34
THUMPD3-210ENST00000515662 SAMD3Q8N6K7 520 aa17.21■□□□□ 0.34
THUMPD3-210ENST00000515662 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.21■□□□□ 0.34
THUMPD3-210ENST00000515662 MXRA8Q9BRK3 442 aa17.21■□□□□ 0.34
THUMPD3-210ENST00000515662 MAP3K20Q9NYL2 800 aaKnown RBP17.21■□□□□ 0.34
THUMPD3-210ENST00000515662 NPHP3-ACAD11A0A0J9YXS1 232 aa17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 USP2O75604 605 aaPredicted RBP17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 SLC30A10Q6XR72 485 aa17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 CCAR2Q8N163 923 aaKnown RBP17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 SYTL5Q8TDW5 730 aaPredicted RBP17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 HSD17B14Q9BPX1 270 aa17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 MAGEC2Q9UBF1 373 aaPredicted RBP17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 ITIH6Q6UXX5 1313 aa17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 GAS7O60861 476 aa17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 ITGB5P18084 799 aa17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 CYP4A11Q02928 519 aa17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 PRKG1Q13976 671 aa17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 TMEM139Q8IV31 216 aa17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 CCDC65Q8IXS2 484 aa17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 SYT2Q8N9I0 419 aaPredicted RBP17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 IL31RAQ8NI17 732 aa17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 TRERF1Q96PN7 1200 aa17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 ZNF577Q9BSK1 485 aa17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 RGL1Q9NZL6 768 aa17.2■□□□□ 0.34
THUMPD3-210ENST00000515662 RBBP6Q7Z6E9 1792 aaKnown RBP17.19■□□□□ 0.34
THUMPD3-210ENST00000515662 FRMPD4Q14CM0 1322 aa17.19■□□□□ 0.34
THUMPD3-210ENST00000515662 ADKP55263 362 aaKnown RBP17.19■□□□□ 0.34
THUMPD3-210ENST00000515662 PABPC4Q13310 644 aaKnown RBP eCLIP17.19■□□□□ 0.34
THUMPD3-210ENST00000515662 E4F1Q66K89 784 aaPredicted RBP17.19■□□□□ 0.34
THUMPD3-210ENST00000515662 KCTD17Q8N5Z5 321 aa17.19■□□□□ 0.34
THUMPD3-210ENST00000515662 GLIS3Q8NEA6 775 aa17.19■□□□□ 0.34
THUMPD3-210ENST00000515662 REPS2Q8NFH8 660 aa17.19■□□□□ 0.34
THUMPD3-210ENST00000515662 ADAMTS5Q9UNA0 930 aa17.19■□□□□ 0.34
THUMPD3-210ENST00000515662 AFG3L2Q9Y4W6 797 aa17.19■□□□□ 0.34
THUMPD3-210ENST00000515662 RLFQ13129 1914 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 FRMD3A2A2Y4 597 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 BCRP11274 1271 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 DSG3P32926 999 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 RPS6P62753 249 aaKnown RBP17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 FAM26FQ5R3K3 315 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 DLK2Q6UY11 383 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 KRT26Q7Z3Y9 468 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 PPFIBP1Q86W92 1011 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 C16orf45Q96MC5 204 aaPredicted RBP17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 WDR11Q9BZH6 1224 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 TUFT1Q9NNX1 390 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 PCDHA2Q9Y5H9 948 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 LGALS16A8MUM7 142 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 AKR1B15C9JRZ8 316 aaPredicted RBP17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 IPO5O00410 1097 aaKnown RBP17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 CHMP2AO43633 222 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 RBL2Q08999 1139 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 LRRC41Q15345 812 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 GLIPR1L2Q4G1C9 344 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 C9orf131Q5VYM1 1079 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 PCNX4Q63HM2 1172 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 NIPA1Q7RTP0 329 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 FAM114A1Q8IWE2 563 aa17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 TRMT1Q9NXH9 659 aaKnown RBP17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 POLR2AP24928 1970 aaKnown RBP17.18■□□□□ 0.34
THUMPD3-210ENST00000515662 SLITRK3O94933 977 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 KRT18P05783 430 aaKnown RBP17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 CACNB1Q02641 598 aaPredicted RBP17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 COG2Q14746 738 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 CEP135Q66GS9 1140 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 B3GNT9Q6UX72 402 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 CATSPERGQ6ZRH7 1159 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 MYOCDQ8IZQ8 938 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 DCPSQ96C86 337 aaKnown RBP17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 EEF2KMTQ96G04 330 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 TAAR1Q96RJ0 339 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 BAG1Q99933 345 aaPredicted RBP17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 UNC45AQ9H3U1 944 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 TMOD4Q9NZQ9 345 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 RIPK3Q9Y572 518 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 ADM5C9JUS6 153 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 DYNC1I1O14576 645 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 EYA4O95677 639 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 OAZ1P54368 228 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 UBXN1Q04323 297 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 LRRC63Q05C16 580 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 RAD51AP2Q09MP3 1159 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 GIT2Q14161 759 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 CTTNQ14247 550 aaKnown RBP17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 HERC4Q5GLZ8 1057 aaPredicted RBP17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 FOXR2Q6PJQ5 311 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 RNF207Q6ZRF8 634 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 DYDC2Q96IM9 177 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 CNOT6LQ96LI5 555 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms