RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-215ENST00000515008 CDH23Q9H251 3354 aa20.28■□□□□ 0.84
SIL1-215ENST00000515008 NID2Q14112 1375 aa20.27■□□□□ 0.84
SIL1-215ENST00000515008 CCDC196A0A1B0GTZ2 297 aa20.27■□□□□ 0.84
SIL1-215ENST00000515008 H3BRB1 525 aa20.27■□□□□ 0.84
SIL1-215ENST00000515008 BAIAP3O94812 1187 aa20.27■□□□□ 0.84
SIL1-215ENST00000515008 ATP2A2P16615 1042 aaKnown RBP20.27■□□□□ 0.84
SIL1-215ENST00000515008 NAPAP54920 295 aa20.27■□□□□ 0.84
SIL1-215ENST00000515008 UBE2SQ16763 222 aa20.27■□□□□ 0.84
SIL1-215ENST00000515008 BLOC1S2Q6QNY1 142 aa20.27■□□□□ 0.84
SIL1-215ENST00000515008 FBXL16Q8N461 479 aa20.27■□□□□ 0.84
SIL1-215ENST00000515008 MAFAQ8NHW3 353 aaPredicted RBP20.27■□□□□ 0.84
SIL1-215ENST00000515008 SLC9A7Q96T83 725 aa20.27■□□□□ 0.84
SIL1-215ENST00000515008 GPR20Q99678 358 aa20.27■□□□□ 0.84
SIL1-215ENST00000515008 TUT1Q9H6E5 874 aaKnown RBP20.27■□□□□ 0.84
SIL1-215ENST00000515008 PCDHA11Q9Y5I1 949 aa20.27■□□□□ 0.84
SIL1-215ENST00000515008 SNX14Q9Y5W7 946 aa20.27■□□□□ 0.84
SIL1-215ENST00000515008 CKBP12277 381 aa20.26■□□□□ 0.83
SIL1-215ENST00000515008 PSMA5P28066 241 aa20.26■□□□□ 0.83
SIL1-215ENST00000515008 HOXC8P31273 242 aa20.26■□□□□ 0.83
SIL1-215ENST00000515008 METAP2P50579 478 aaKnown RBP eCLIP20.26■□□□□ 0.83
SIL1-215ENST00000515008 GRIN2CQ14957 1233 aa20.26■□□□□ 0.83
SIL1-215ENST00000515008 PHOSPHO2Q8TCD6 241 aa20.26■□□□□ 0.83
SIL1-215ENST00000515008 FTOQ9C0B1 505 aaKnown RBP eCLIP20.26■□□□□ 0.83
SIL1-215ENST00000515008 RIC8AQ9NPQ8 531 aa20.26■□□□□ 0.83
SIL1-215ENST00000515008 FAM217BQ9NTX9 383 aaPredicted RBP20.26■□□□□ 0.83
SIL1-215ENST00000515008 ZNF215Q9UL58 517 aaPredicted RBP20.26■□□□□ 0.83
SIL1-215ENST00000515008 PCDHA6Q9UN73 950 aa20.26■□□□□ 0.83
SIL1-215ENST00000515008 PCDHA8Q9Y5H6 950 aa20.26■□□□□ 0.83
SIL1-215ENST00000515008 UBIAD1Q9Y5Z9 338 aa20.26■□□□□ 0.83
SIL1-215ENST00000515008 MAFGO15525 162 aa20.25■□□□□ 0.83
SIL1-215ENST00000515008 FOSP01100 380 aaPredicted RBP20.25■□□□□ 0.83
SIL1-215ENST00000515008 ADCY7P51828 1080 aa20.25■□□□□ 0.83
SIL1-215ENST00000515008 TRIM71Q2Q1W2 868 aaKnown RBP20.25■□□□□ 0.83
SIL1-215ENST00000515008 SERINC5Q86VE9 423 aa20.25■□□□□ 0.83
SIL1-215ENST00000515008 BCAS3Q9H6U6 928 aa20.25■□□□□ 0.83
SIL1-215ENST00000515008 BARHL2Q9NY43 387 aa20.25■□□□□ 0.83
SIL1-215ENST00000515008 V9GY48 417 aaPredicted RBP20.25■□□□□ 0.83
SIL1-215ENST00000515008 C17orf102A2RUQ5 167 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 STXBP3O00186 592 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 CXCL10P02778 98 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 SMIM10L2AP0DMW4 78 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 SMIM10L2BP0DMW5 78 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 KCNA2P16389 499 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 ITGB5P18084 799 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 RPS6KB1P23443 525 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 CDC27P30260 824 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 MTMR1Q13613 665 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 TYW1BQ6NUM6 668 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 Q6ZUG5 572 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 BRF1Q92994 677 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 AGXT2Q9BYV1 514 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 NKX2-4Q9H2Z4 354 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 SLC28A3Q9HAS3 691 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 JADE2Q9NQC1 790 aa20.24■□□□□ 0.83
SIL1-215ENST00000515008 NAP1L2Q9ULW6 460 aaPredicted RBP20.24■□□□□ 0.83
SIL1-215ENST00000515008 YBX2Q9Y2T7 364 aaKnown RBP20.24■□□□□ 0.83
SIL1-215ENST00000515008 CAND2O75155 1236 aa20.23■□□□□ 0.83
SIL1-215ENST00000515008 GNAT1P11488 350 aa20.23■□□□□ 0.83
SIL1-215ENST00000515008 APOBRQ0VD83 1088 aa20.23■□□□□ 0.83
SIL1-215ENST00000515008 AP3B2Q13367 1082 aa20.23■□□□□ 0.83
SIL1-215ENST00000515008 CNKSR3Q6P9H4 555 aa20.23■□□□□ 0.83
SIL1-215ENST00000515008 ATP6V0A1Q93050 837 aa20.23■□□□□ 0.83
SIL1-215ENST00000515008 GAS2L1Q99501 681 aaPredicted RBP20.23■□□□□ 0.83
SIL1-215ENST00000515008 EMSYQ7Z589 1322 aa20.23■□□□□ 0.83
SIL1-215ENST00000515008 EFCAB14O75071 495 aa20.22■□□□□ 0.83
SIL1-215ENST00000515008 CPA1P15085 419 aa20.22■□□□□ 0.83
SIL1-215ENST00000515008 KCNJ6P48051 423 aa20.22■□□□□ 0.83
SIL1-215ENST00000515008 ZNF200P98182 395 aaPredicted RBP20.22■□□□□ 0.83
SIL1-215ENST00000515008 HIC1Q14526 733 aa20.22■□□□□ 0.83
SIL1-215ENST00000515008 GPNMBQ14956 572 aa20.22■□□□□ 0.83
SIL1-215ENST00000515008 PFKFB3Q16875 520 aaPredicted RBP20.22■□□□□ 0.83
SIL1-215ENST00000515008 TRAF7Q6Q0C0 670 aa20.22■□□□□ 0.83
SIL1-215ENST00000515008 KAT6AQ92794 2004 aa20.22■□□□□ 0.83
SIL1-215ENST00000515008 SMCO2A6NFE2 343 aa20.21■□□□□ 0.83
SIL1-215ENST00000515008 NBNO60934 754 aa20.21■□□□□ 0.83
SIL1-215ENST00000515008 RABGGTBP53611 331 aa20.21■□□□□ 0.83
SIL1-215ENST00000515008 SP4Q02446 784 aa20.21■□□□□ 0.83
SIL1-215ENST00000515008 ZNF618Q5T7W0 954 aa20.21■□□□□ 0.83
SIL1-215ENST00000515008 ERICH6BQ5W0A0 696 aa20.21■□□□□ 0.83
SIL1-215ENST00000515008 PPP2R2DQ66LE6 453 aa20.21■□□□□ 0.83
SIL1-215ENST00000515008 TRIM50Q86XT4 487 aa20.21■□□□□ 0.83
SIL1-215ENST00000515008 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.21■□□□□ 0.83
SIL1-215ENST00000515008 SEPT1Q8WYJ6 367 aa20.21■□□□□ 0.83
SIL1-215ENST00000515008 WNT8BQ93098 351 aa20.21■□□□□ 0.83
SIL1-215ENST00000515008 ANO3Q9BYT9 981 aa20.21■□□□□ 0.83
SIL1-215ENST00000515008 ABHD14A-ACY1A0A1B0GW23 586 aa20.2■□□□□ 0.82
SIL1-215ENST00000515008 ESYT2A0FGR8 921 aa20.2■□□□□ 0.82
SIL1-215ENST00000515008 KIF28PB7ZC32 967 aa20.2■□□□□ 0.82
SIL1-215ENST00000515008 ATP9AO75110 1047 aa20.2■□□□□ 0.82
SIL1-215ENST00000515008 SCG2P13521 617 aa20.2■□□□□ 0.82
SIL1-215ENST00000515008 ADD1P35611 737 aaKnown RBP20.2■□□□□ 0.82
SIL1-215ENST00000515008 TCF7P36402 384 aaPredicted RBP20.2■□□□□ 0.82
SIL1-215ENST00000515008 SREBF1P36956 1147 aa20.2■□□□□ 0.82
SIL1-215ENST00000515008 CLK2P49760 499 aaKnown RBP20.2■□□□□ 0.82
SIL1-215ENST00000515008 UTP14CQ5TAP6 766 aaKnown RBP20.2■□□□□ 0.82
SIL1-215ENST00000515008 HERC6Q8IVU3 1022 aa20.2■□□□□ 0.82
SIL1-215ENST00000515008 CCDC12Q8WUD4 166 aaPredicted RBP20.2■□□□□ 0.82
SIL1-215ENST00000515008 MXRA8Q9BRK3 442 aa20.2■□□□□ 0.82
SIL1-215ENST00000515008 RNPEPQ9H4A4 650 aa20.2■□□□□ 0.82
SIL1-215ENST00000515008 THPOP40225 353 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms