RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	ZFYVE27	Q5T4F4	411 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	STEAP3	Q658P3	488 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	MBLAC2	Q68D91	279 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	BORA	Q6PGQ7	559 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	RPUSD2	Q8IZ73	545 aa	Known RBP	4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	KY	Q8NBH2	561 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	TMEM145	Q8NBT3	493 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	KREMEN2	Q8NCW0	462 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	DPF3	Q92784	378 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	CHAMP1	Q96JM3	812 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	XYLT2	Q9H1B5	865 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	BTG4	Q9NY30	223 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	HSPBP1	Q9NZL4	362 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PALD1	Q9ULE6	856 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PCDHB4	Q9Y5E5	795 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	CD2AP	Q9Y5K6	639 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267		A0A1W2PQU0	124 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PRRG2	O14669	202 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PLD2	O14939	933 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	MARCH6	O60337	910 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	RPL13	P26373	211 aa	Known RBP	4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	BCL6	P41182	706 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	SPIRE1	Q08AE8	756 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	FNDC3B	Q53EP0	1204 aa	Known RBP	4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	MILR1	Q7Z6M3	343 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PLEKHH3	Q7Z736	793 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	SCUBE1	Q8IWY4	988 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	NIM1K	Q8IY84	436 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	CARF	Q8N187	725 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	RCBTB1	Q8NDN9	531 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	TTLL11	Q8NHH1	800 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	KISS1R	Q969F8	398 aa	Predicted RBP	4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	ZBTB8A	Q96BR9	441 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	TOE1	Q96GM8	510 aa	Known RBP	4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	C1orf159	Q96HA4	380 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	IER2	Q9BTL4	223 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	DHRS4	Q9BTZ2	278 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	SMOC1	Q9H4F8	434 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	CLDND1	Q9NY35	253 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	DDX56	Q9NY93	547 aa	Known RBP	4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	FBLN5	Q9UBX5	448 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PCDHA2	Q9Y5H9	948 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	HCFC2	Q9Y5Z7	792 aa		4.75	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	AQP7	O14520	342 aa		4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	SGSM2	O43147	1006 aa		4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PPP1R11	O60927	126 aa	Predicted RBP	4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PLA2G1B	P04054	148 aa	Known RBP	4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	CAPNS1	P04632	268 aa		4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	SURF1	Q15526	300 aa		4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	CCDC181	Q5TID7	509 aa		4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	CD300LD	Q6UXZ3	194 aa		4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	CCDC103	Q8IW40	242 aa		4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	CHAC2	Q8WUX2	184 aa		4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	CLIC6	Q96NY7	704 aa		4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	ALG1	Q9BT22	464 aa		4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	MRPL4	Q9BYD3	311 aa	Known RBP	4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	INTS7	Q9NVH2	962 aa	Known RBP	4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	DTL	Q9NZJ0	730 aa		4.74	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	C9orf118	A6NHY6	69 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	TBX1	O43435	398 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	KCNQ2	O43526	872 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	CHGB	P05060	677 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	C8B	P07358	591 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	CELA3B	P08861	270 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PABPC1	P11940	636 aa	Known RBP	4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	FPR2	P25090	351 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	THBS2	P35442	1172 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	SOX5	P35711	763 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	STAT3	P40763	770 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	MC3R	P41968	323 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	GPR85	P60893	370 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	CYP4F3	Q08477	520 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PLEKHG6	Q3KR16	790 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	STYK1	Q6J9G0	422 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	NSMF	Q6X4W1	530 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	NLRP10	Q86W26	655 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	IFNL3	Q8IZI9	196 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	TP53I13	Q8NBR0	393 aa	Predicted RBP	4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	CDC6	Q99741	560 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	CAAP1	Q9H8G2	361 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	NCOA5	Q9HCD5	579 aa	Known RBP	4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	SLC6A20	Q9NP91	592 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	ARHGEF4	Q9NR80	690 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	MYOT	Q9UBF9	498 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	MAPRE3	Q9UPY8	281 aa		4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	MRPS23	Q9Y3D9	190 aa	Known RBP	4.73	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	TRBV23-1	A0A0A0MS06	115 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267		A0A0G2JLL6	359 aa	Predicted RBP	4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	OTOL1	A6NHN0	477 aa	Predicted RBP	4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	FAM47E-STBD1	D6RA91	191 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	GSTA4	O15217	222 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	FOXD2	O60548	495 aa	Predicted RBP	4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	TADA3	O75528	432 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	GRK2	P25098	689 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	GRK3	P35626	688 aa		4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms