RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 ATP11BQ9Y2G3 1177 aa16.49■□□□□ 0.23
SNF8-212ENST00000514089 NR2E3Q9Y5X4 410 aa16.49■□□□□ 0.23
SNF8-212ENST00000514089 ELP1O95163 1332 aa16.48■□□□□ 0.23
SNF8-212ENST00000514089 DDX39AO00148 427 aaKnown RBP16.48■□□□□ 0.23
SNF8-212ENST00000514089 IPO5O00410 1097 aaKnown RBP16.48■□□□□ 0.23
SNF8-212ENST00000514089 MMP3P08254 477 aa16.48■□□□□ 0.23
SNF8-212ENST00000514089 CIITAP33076 1130 aa16.48■□□□□ 0.23
SNF8-212ENST00000514089 SEMA3FQ13275 785 aa16.48■□□□□ 0.23
SNF8-212ENST00000514089 CUL4AQ13619 759 aa16.48■□□□□ 0.23
SNF8-212ENST00000514089 HSDL1Q3SXM5 330 aa16.48■□□□□ 0.23
SNF8-212ENST00000514089 UTP14CQ5TAP6 766 aaKnown RBP16.48■□□□□ 0.23
SNF8-212ENST00000514089 CCSAPQ6IQ19 270 aaPredicted RBP16.48■□□□□ 0.23
SNF8-212ENST00000514089 UBE2Q1Q7Z7E8 422 aa16.48■□□□□ 0.23
SNF8-212ENST00000514089 SEPT1Q8WYJ6 367 aa16.48■□□□□ 0.23
SNF8-212ENST00000514089 FOXP1Q9H334 677 aaPredicted RBP16.48■□□□□ 0.23
SNF8-212ENST00000514089 JPH1Q9HDC5 661 aaPredicted RBP16.48■□□□□ 0.23
SNF8-212ENST00000514089 TBC1D22BQ9NU19 505 aa16.48■□□□□ 0.23
SNF8-212ENST00000514089 PRKAG2Q9UGJ0 569 aa16.48■□□□□ 0.23
SNF8-212ENST00000514089 NOL7Q9UMY1 257 aaKnown RBP16.48■□□□□ 0.23
SNF8-212ENST00000514089 CENPFP49454 3210 aa16.47■□□□□ 0.23
SNF8-212ENST00000514089 A0A0U1RQG5 324 aaPredicted RBP16.47■□□□□ 0.23
SNF8-212ENST00000514089 CTAGE5O15320 804 aa16.47■□□□□ 0.23
SNF8-212ENST00000514089 BAG4O95429 457 aaKnown RBP16.47■□□□□ 0.23
SNF8-212ENST00000514089 GCFC2P16383 781 aaKnown RBP16.47■□□□□ 0.23
SNF8-212ENST00000514089 KCNA2P16389 499 aa16.47■□□□□ 0.23
SNF8-212ENST00000514089 ITGA7Q13683 1181 aa16.47■□□□□ 0.23
SNF8-212ENST00000514089 INTS4Q96HW7 963 aaKnown RBP16.47■□□□□ 0.23
SNF8-212ENST00000514089 KATNAL1Q9BW62 490 aa16.47■□□□□ 0.23
SNF8-212ENST00000514089 SLC9A2Q9UBY0 812 aa16.47■□□□□ 0.23
SNF8-212ENST00000514089 SAMM50Q9Y512 469 aa16.47■□□□□ 0.23
SNF8-212ENST00000514089 DCDC2CA8MYV0 355 aa16.46■□□□□ 0.23
SNF8-212ENST00000514089 PQBP1O60828 265 aaKnown RBP16.46■□□□□ 0.23
SNF8-212ENST00000514089 TDP2O95551 362 aa16.46■□□□□ 0.23
SNF8-212ENST00000514089 RTP1P59025 263 aa16.46■□□□□ 0.23
SNF8-212ENST00000514089 PSMC6P62333 389 aa16.46■□□□□ 0.23
SNF8-212ENST00000514089 PURAQ00577 322 aaKnown RBP16.46■□□□□ 0.23
SNF8-212ENST00000514089 BECN1Q14457 450 aa16.46■□□□□ 0.23
SNF8-212ENST00000514089 LRRC26Q2I0M4 334 aa16.46■□□□□ 0.23
SNF8-212ENST00000514089 C7orf61Q8IZ16 206 aa16.46■□□□□ 0.23
SNF8-212ENST00000514089 C7orf31Q8N865 590 aa16.46■□□□□ 0.23
SNF8-212ENST00000514089 CRYGNQ8WXF5 182 aa16.46■□□□□ 0.23
SNF8-212ENST00000514089 GLG1Q92896 1179 aa16.46■□□□□ 0.23
SNF8-212ENST00000514089 GPR20Q99678 358 aa16.46■□□□□ 0.23
SNF8-212ENST00000514089 AZI2Q9H6S1 392 aa16.46■□□□□ 0.23
SNF8-212ENST00000514089 BCAS3Q9H6U6 928 aa16.46■□□□□ 0.23
SNF8-212ENST00000514089 IGLV3-22A0A075B6J6 115 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 CYP3A7-CYP3A51PA0A087WV96 503 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 VPS37CA5D8V6 355 aaPredicted RBP16.45■□□□□ 0.22
SNF8-212ENST00000514089 ARVCFO00192 962 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 BACH1O14867 736 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 TLR3O15455 904 aaKnown RBP16.45■□□□□ 0.22
SNF8-212ENST00000514089 GAS7O60861 476 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 CYP3A7P24462 503 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 TCF7P36402 384 aaPredicted RBP16.45■□□□□ 0.22
SNF8-212ENST00000514089 TRIM60Q495X7 471 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 Q4G0T1 1027 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 PPP4R3AQ6IN85 833 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 MOXD1Q6UVY6 613 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 NOSTRINQ8IVI9 506 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 SPRYD3Q8NCJ5 442 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 SEZ6LQ9BYH1 1024 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 PRDM5Q9NQX1 630 aaPredicted RBP16.45■□□□□ 0.22
SNF8-212ENST00000514089 ZNF215Q9UL58 517 aaPredicted RBP16.45■□□□□ 0.22
SNF8-212ENST00000514089 NOD1Q9Y239 953 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 SMCHD1A6NHR9 2005 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 NFASCO94856 1347 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 MROH7Q68CQ1 1323 aa16.45■□□□□ 0.22
SNF8-212ENST00000514089 ZNF286BP0CG31 522 aa16.44■□□□□ 0.22
SNF8-212ENST00000514089 TLE2Q04725 743 aa16.44■□□□□ 0.22
SNF8-212ENST00000514089 ITGB3BPQ13352 177 aaPredicted RBP16.44■□□□□ 0.22
SNF8-212ENST00000514089 NBPF20Q3BBV1 942 aa16.44■□□□□ 0.22
SNF8-212ENST00000514089 EARS2Q5JPH6 523 aaKnown RBP16.44■□□□□ 0.22
SNF8-212ENST00000514089 LRCH2Q5VUJ6 765 aa16.44■□□□□ 0.22
SNF8-212ENST00000514089 MIS18BP1Q6P0N0 1132 aa16.44■□□□□ 0.22
SNF8-212ENST00000514089 TEKT3Q9BXF9 490 aa16.44■□□□□ 0.22
SNF8-212ENST00000514089 ZNFX1Q9P2E3 1918 aaKnown RBP16.44■□□□□ 0.22
SNF8-212ENST00000514089 FAM205CA6NFA0 338 aa16.43■□□□□ 0.22
SNF8-212ENST00000514089 H3BRB1 525 aa16.43■□□□□ 0.22
SNF8-212ENST00000514089 MSH4O15457 936 aa16.43■□□□□ 0.22
SNF8-212ENST00000514089 CHMP2AO43633 222 aa16.43■□□□□ 0.22
SNF8-212ENST00000514089 MCM7P33993 719 aa16.43■□□□□ 0.22
SNF8-212ENST00000514089 PSEN2P49810 448 aa16.43■□□□□ 0.22
SNF8-212ENST00000514089 ACTR2P61160 394 aa16.43■□□□□ 0.22
SNF8-212ENST00000514089 KRT76Q01546 638 aa16.43■□□□□ 0.22
SNF8-212ENST00000514089 MFSD10Q14728 455 aa16.43■□□□□ 0.22
SNF8-212ENST00000514089 KIAA0753Q2KHM9 967 aa16.43■□□□□ 0.22
SNF8-212ENST00000514089 TNPO1Q92973 898 aaKnown RBP16.43■□□□□ 0.22
SNF8-212ENST00000514089 TNFRSF25Q93038 417 aa16.43■□□□□ 0.22
SNF8-212ENST00000514089 RIT2Q99578 217 aa16.43■□□□□ 0.22
SNF8-212ENST00000514089 SMARCAD1Q9H4L7 1026 aa16.43■□□□□ 0.22
SNF8-212ENST00000514089 TUT1Q9H6E5 874 aaKnown RBP16.43■□□□□ 0.22
SNF8-212ENST00000514089 TMEM39AQ9NV64 488 aa16.43■□□□□ 0.22
SNF8-212ENST00000514089 NEMFO60524 1076 aa16.42■□□□□ 0.22
SNF8-212ENST00000514089 LGALS2P05162 132 aa16.42■□□□□ 0.22
SNF8-212ENST00000514089 PSAPP07602 524 aa16.42■□□□□ 0.22
SNF8-212ENST00000514089 SUPT20HL2P0C7V6 817 aa16.42■□□□□ 0.22
SNF8-212ENST00000514089 ZNF174Q15697 407 aa16.42■□□□□ 0.22
SNF8-212ENST00000514089 CALCRLQ16602 461 aa16.42■□□□□ 0.22
SNF8-212ENST00000514089 C1orf53Q5VUE5 145 aa16.42■□□□□ 0.22
SNF8-212ENST00000514089 FAM160B1Q5W0V3 765 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms