RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 AFG1LQ8WV93 481 aa12.84□□□□□ -0.35
HTT-213ENST00000513806 HAS1Q92839 578 aa12.84□□□□□ -0.35
HTT-213ENST00000513806 IPO9Q96P70 1041 aaKnown RBP12.84□□□□□ -0.35
HTT-213ENST00000513806 TFIP11Q9UBB9 837 aaKnown RBP12.84□□□□□ -0.35
HTT-213ENST00000513806 NOL7Q9UMY1 257 aaKnown RBP12.84□□□□□ -0.35
HTT-213ENST00000513806 ALPK3Q96L96 1907 aa12.84□□□□□ -0.35
HTT-213ENST00000513806 DNAH12Q6ZR08 3092 aa12.83□□□□□ -0.36
HTT-213ENST00000513806 RBAK-RBAKDNI3L0D1 243 aa12.83□□□□□ -0.36
HTT-213ENST00000513806 IPO5O00410 1097 aaKnown RBP12.83□□□□□ -0.36
HTT-213ENST00000513806 NEMFO60524 1076 aa12.83□□□□□ -0.36
HTT-213ENST00000513806 DUSP11O75319 330 aaKnown RBP12.83□□□□□ -0.36
HTT-213ENST00000513806 FARP2O94887 1054 aaPredicted RBP12.83□□□□□ -0.36
HTT-213ENST00000513806 SGPL1O95470 568 aa12.83□□□□□ -0.36
HTT-213ENST00000513806 CCNE2O96020 404 aa12.83□□□□□ -0.36
HTT-213ENST00000513806 TFRCP02786 760 aaKnown RBP12.83□□□□□ -0.36
HTT-213ENST00000513806 LRRC41Q15345 812 aa12.83□□□□□ -0.36
HTT-213ENST00000513806 NIPA1Q7RTP0 329 aa12.83□□□□□ -0.36
HTT-213ENST00000513806 BRAPQ7Z569 592 aa12.83□□□□□ -0.36
HTT-213ENST00000513806 C4orf32Q8N8J7 132 aa12.83□□□□□ -0.36
HTT-213ENST00000513806 DIS3LQ8TF46 1054 aaKnown RBP12.83□□□□□ -0.36
HTT-213ENST00000513806 SLC5A5Q92911 643 aa12.83□□□□□ -0.36
HTT-213ENST00000513806 SPATA33Q96N06 139 aa12.83□□□□□ -0.36
HTT-213ENST00000513806 USP28Q96RU2 1077 aa12.83□□□□□ -0.36
HTT-213ENST00000513806 AP5M1Q9H0R1 490 aa12.83□□□□□ -0.36
HTT-213ENST00000513806 MLXIPQ9HAP2 919 aa12.83□□□□□ -0.36
HTT-213ENST00000513806 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.83□□□□□ -0.36
HTT-213ENST00000513806 KAT6AQ92794 2004 aa12.83□□□□□ -0.36
HTT-213ENST00000513806 GJB1P08034 283 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 MMP3P08254 477 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 MYL3P08590 195 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 ZNF286BP0CG31 522 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 TXKP42681 527 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 MNX1P50219 401 aaPredicted RBP12.82□□□□□ -0.36
HTT-213ENST00000513806 GJA9P57773 515 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 CHMP4BP1P59074 171 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 SETQ01105 290 aaPredicted RBP12.82□□□□□ -0.36
HTT-213ENST00000513806 PTGDRQ13258 359 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 SF3A1Q15459 793 aaKnown RBP12.82□□□□□ -0.36
HTT-213ENST00000513806 IL17AQ16552 155 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 CALCRLQ16602 461 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 FSCN1Q16658 493 aaKnown RBP12.82□□□□□ -0.36
HTT-213ENST00000513806 UTP14CQ5TAP6 766 aaKnown RBP12.82□□□□□ -0.36
HTT-213ENST00000513806 LRCH2Q5VUJ6 765 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 MOXD1Q6UVY6 613 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 FERMT2Q96AC1 680 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 TMEM106CQ9BVX2 250 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 UPF3AQ9H1J1 476 aaKnown RBP12.82□□□□□ -0.36
HTT-213ENST00000513806 UNC45AQ9H3U1 944 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 KCNMB3Q9NPA1 279 aa12.82□□□□□ -0.36
HTT-213ENST00000513806 GSTTP1A0A1W2PQM5 241 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 EML1O00423 815 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 MARCH6O60337 910 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 GAS7O60861 476 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 PSMD10O75832 226 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 TGFB3P10600 412 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 GCFC2P16383 781 aaKnown RBP12.81□□□□□ -0.36
HTT-213ENST00000513806 GJA8P48165 433 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 DNM1Q05193 864 aaKnown RBP12.81□□□□□ -0.36
HTT-213ENST00000513806 GRIN1Q05586 938 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 NEDD9Q14511 834 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 KCNA10Q16322 511 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 RILPL1Q5EBL4 403 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 KCNV1Q6PIU1 500 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 TRIM50Q86XT4 487 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 KLHDC9Q8NEP7 349 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 CDHR1Q96JP9 859 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 MTMR9Q96QG7 549 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 GPR20Q99678 358 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 SDF4Q9BRK5 362 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 CRISPLD2Q9H0B8 497 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 ZSCAN16Q9H4T2 348 aaPredicted RBP12.81□□□□□ -0.36
HTT-213ENST00000513806 JPH1Q9HDC5 661 aaPredicted RBP12.81□□□□□ -0.36
HTT-213ENST00000513806 PCDH10Q9P2E7 1040 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 SLC9A2Q9UBY0 812 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 VAV3Q9UKW4 847 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 OGDHLQ9ULD0 1010 aa12.81□□□□□ -0.36
HTT-213ENST00000513806 SCN10AQ9Y5Y9 1956 aa12.8□□□□□ -0.36
HTT-213ENST00000513806 POTEMA6NI47 508 aa12.8□□□□□ -0.36
HTT-213ENST00000513806 NKRFO15226 690 aaKnown RBP eCLIP12.8□□□□□ -0.36
HTT-213ENST00000513806 OR52Z1P0C646 297 aa12.8□□□□□ -0.36
HTT-213ENST00000513806 TECP42680 631 aa12.8□□□□□ -0.36
HTT-213ENST00000513806 TRAPPC10P48553 1259 aa12.8□□□□□ -0.36
HTT-213ENST00000513806 ACTR2P61160 394 aa12.8□□□□□ -0.36
HTT-213ENST00000513806 PSMC6P62333 389 aa12.8□□□□□ -0.36
HTT-213ENST00000513806 LAMC2Q13753 1193 aa12.8□□□□□ -0.36
HTT-213ENST00000513806 GNASQ5JWF2 1037 aa12.8□□□□□ -0.36
HTT-213ENST00000513806 NCAPH2Q6IBW4 605 aa12.8□□□□□ -0.36
HTT-213ENST00000513806 CCSAPQ6IQ19 270 aaPredicted RBP12.8□□□□□ -0.36
HTT-213ENST00000513806 METTL7BQ6UX53 244 aa12.8□□□□□ -0.36
HTT-213ENST00000513806 CXCL17Q6UXB2 119 aa12.8□□□□□ -0.36
HTT-213ENST00000513806 NAP1L4Q99733 375 aaKnown RBP12.8□□□□□ -0.36
HTT-213ENST00000513806 SENP7Q9BQF6 1050 aa12.8□□□□□ -0.36
HTT-213ENST00000513806 TEKT3Q9BXF9 490 aa12.8□□□□□ -0.36
HTT-213ENST00000513806 NFASCO94856 1347 aa12.8□□□□□ -0.36
HTT-213ENST00000513806 EVPLQ92817 2033 aa12.79□□□□□ -0.36
HTT-213ENST00000513806 ARID2Q68CP9 1835 aa12.79□□□□□ -0.36
HTT-213ENST00000513806 PP2D1A8MPX8 630 aa12.79□□□□□ -0.36
HTT-213ENST00000513806 NOP56O00567 594 aaKnown RBP12.79□□□□□ -0.36
HTT-213ENST00000513806 MAFGO15525 162 aa12.79□□□□□ -0.36
HTT-213ENST00000513806 MSCO60682 206 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms