RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 LINC00271P0C7V0 271 aa12.73□□□□□ -0.37
NFKB1-211ENST00000513803 TOP1P11387 765 aaKnown RBP12.73□□□□□ -0.37
NFKB1-211ENST00000513803 HOXD8P13378 290 aaPredicted RBP12.73□□□□□ -0.37
NFKB1-211ENST00000513803 ATF7P17544 494 aaPredicted RBP12.73□□□□□ -0.37
NFKB1-211ENST00000513803 NOVP48745 357 aa12.73□□□□□ -0.37
NFKB1-211ENST00000513803 CAMK1Q14012 370 aa12.73□□□□□ -0.37
NFKB1-211ENST00000513803 BTG3Q14201 252 aaPredicted RBP12.73□□□□□ -0.37
NFKB1-211ENST00000513803 NAALADL2Q58DX5 795 aa12.73□□□□□ -0.37
NFKB1-211ENST00000513803 MCTP2Q6DN12 878 aa12.73□□□□□ -0.37
NFKB1-211ENST00000513803 ZBTB33Q86T24 672 aa12.73□□□□□ -0.37
NFKB1-211ENST00000513803 ADSSL1Q8N142 457 aa12.73□□□□□ -0.37
NFKB1-211ENST00000513803 P2RX5Q93086 422 aa12.73□□□□□ -0.37
NFKB1-211ENST00000513803 TAAR1Q96RJ0 339 aa12.73□□□□□ -0.37
NFKB1-211ENST00000513803 RMDN3Q96TC7 470 aa12.73□□□□□ -0.37
NFKB1-211ENST00000513803 ECHDC1Q9NTX5 307 aa12.73□□□□□ -0.37
NFKB1-211ENST00000513803 KMT2EQ8IZD2 1858 aa12.73□□□□□ -0.37
NFKB1-211ENST00000513803 NCOR2Q9Y618 2525 aa12.72□□□□□ -0.37
NFKB1-211ENST00000513803 M0R2C6 588 aa12.72□□□□□ -0.37
NFKB1-211ENST00000513803 CTSHP09668 335 aa12.72□□□□□ -0.37
NFKB1-211ENST00000513803 NRIP1P48552 1158 aa12.72□□□□□ -0.37
NFKB1-211ENST00000513803 USH1GQ495M9 461 aa12.72□□□□□ -0.37
NFKB1-211ENST00000513803 ARHGEF16Q5VV41 709 aa12.72□□□□□ -0.37
NFKB1-211ENST00000513803 KCNV1Q6PIU1 500 aa12.72□□□□□ -0.37
NFKB1-211ENST00000513803 MCF2L2Q86YR7 1114 aa12.72□□□□□ -0.37
NFKB1-211ENST00000513803 SYTL5Q8TDW5 730 aaPredicted RBP12.72□□□□□ -0.37
NFKB1-211ENST00000513803 SPATA33Q96N06 139 aa12.72□□□□□ -0.37
NFKB1-211ENST00000513803 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.72□□□□□ -0.37
NFKB1-211ENST00000513803 RALGAPA2Q2PPJ7 1873 aa12.72□□□□□ -0.37
NFKB1-211ENST00000513803 NLRC5Q86WI3 1866 aa12.72□□□□□ -0.37
NFKB1-211ENST00000513803 TREHO43280 583 aa12.71□□□□□ -0.37
NFKB1-211ENST00000513803 GNAT1P11488 350 aa12.71□□□□□ -0.37
NFKB1-211ENST00000513803 MYSM1Q5VVJ2 828 aa12.71□□□□□ -0.37
NFKB1-211ENST00000513803 FRMD5Q7Z6J6 570 aa12.71□□□□□ -0.37
NFKB1-211ENST00000513803 RBM23Q86U06 439 aaKnown RBP12.71□□□□□ -0.37
NFKB1-211ENST00000513803 SIRT2Q8IXJ6 389 aa12.71□□□□□ -0.37
NFKB1-211ENST00000513803 SPPL3Q8TCT6 385 aa12.71□□□□□ -0.37
NFKB1-211ENST00000513803 TMEM47Q9BQJ4 181 aa12.71□□□□□ -0.37
NFKB1-211ENST00000513803 C16orf70Q9BSU1 422 aa12.71□□□□□ -0.37
NFKB1-211ENST00000513803 LRRCC1Q9C099 1032 aa12.71□□□□□ -0.37
NFKB1-211ENST00000513803 TLE6Q9H808 572 aa12.71□□□□□ -0.37
NFKB1-211ENST00000513803 BARX2Q9UMQ3 279 aaPredicted RBP12.71□□□□□ -0.37
NFKB1-211ENST00000513803 PLXNA3P51805 1871 aa12.71□□□□□ -0.37
NFKB1-211ENST00000513803 FSD2A1L4K1 749 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 H3BRB1 525 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 PDGFBP01127 241 aaPredicted RBP12.7□□□□□ -0.38
NFKB1-211ENST00000513803 NR3C2P08235 984 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 SMIM10L2AP0DMW4 78 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 SMIM10L2BP0DMW5 78 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 PDHBP11177 359 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 HOXC8P31273 242 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 CTDSPL2Q05D32 466 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 ZNF543Q08ER8 600 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 CELF3Q5SZQ8 465 aaKnown RBP12.7□□□□□ -0.38
NFKB1-211ENST00000513803 ADGRD2Q7Z7M1 963 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 UBALD2Q8IYN6 164 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 SUSD6Q92537 303 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 TBC1D5Q92609 795 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 ZNF689Q96CS4 500 aaPredicted RBP12.7□□□□□ -0.38
NFKB1-211ENST00000513803 GPATCH3Q96I76 525 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 OSBPL7Q9BZF2 842 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 RNPEPQ9H4A4 650 aa12.7□□□□□ -0.38
NFKB1-211ENST00000513803 TUT1Q9H6E5 874 aaKnown RBP12.7□□□□□ -0.38
NFKB1-211ENST00000513803 ENPP3O14638 875 aa12.69□□□□□ -0.38
NFKB1-211ENST00000513803 ORC4O43929 436 aa12.69□□□□□ -0.38
NFKB1-211ENST00000513803 DGKIO75912 1065 aa12.69□□□□□ -0.38
NFKB1-211ENST00000513803 ITGB1P05556 798 aa12.69□□□□□ -0.38
NFKB1-211ENST00000513803 DNAJB1P25685 340 aa12.69□□□□□ -0.38
NFKB1-211ENST00000513803 HSDL1Q3SXM5 330 aa12.69□□□□□ -0.38
NFKB1-211ENST00000513803 FAM26DQ5JW98 314 aa12.69□□□□□ -0.38
NFKB1-211ENST00000513803 MICAL1Q8TDZ2 1067 aa12.69□□□□□ -0.38
NFKB1-211ENST00000513803 PANK1Q8TE04 598 aa12.69□□□□□ -0.38
NFKB1-211ENST00000513803 RC3H2Q9HBD1 1191 aaKnown RBP12.69□□□□□ -0.38
NFKB1-211ENST00000513803 TCP11L1Q9NUJ3 509 aa12.69□□□□□ -0.38
NFKB1-211ENST00000513803 COL20A1Q9P218 1284 aa12.69□□□□□ -0.38
NFKB1-211ENST00000513803 ACACBO00763 2458 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 ABCB11O95342 1321 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 GGPS1O95749 300 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 GLP2RO95838 553 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 TGFB3P10600 412 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 HSPD1P10809 573 aaKnown RBP12.68□□□□□ -0.38
NFKB1-211ENST00000513803 MS4A1P11836 297 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 EIF2AK2P19525 551 aaKnown RBP12.68□□□□□ -0.38
NFKB1-211ENST00000513803 GPATCH4Q5T3I0 446 aaKnown RBP12.68□□□□□ -0.38
NFKB1-211ENST00000513803 ASTLQ6HA08 431 aaPredicted RBP12.68□□□□□ -0.38
NFKB1-211ENST00000513803 DGLUCYQ7Z3D6 616 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 TMEM105Q8N8V8 129 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 KLHL23Q8NBE8 558 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 POF1BQ8WVV4 589 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 TTC14Q96N46 770 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 NEK1Q96PY6 1258 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 USP26Q9BXU7 913 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 MLXIPQ9HAP2 919 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 TOMM22Q9NS69 142 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 ANAPC4Q9UJX5 808 aa12.68□□□□□ -0.38
NFKB1-211ENST00000513803 SRGAP2BP0DMP2 458 aa12.67□□□□□ -0.38
NFKB1-211ENST00000513803 MTMR3Q13615 1198 aa12.67□□□□□ -0.38
NFKB1-211ENST00000513803 CMTR2Q8IYT2 770 aaKnown RBP12.67□□□□□ -0.38
NFKB1-211ENST00000513803 KREMEN2Q8NCW0 462 aa12.67□□□□□ -0.38
NFKB1-211ENST00000513803 ATP8B4Q8TF62 1192 aa12.67□□□□□ -0.38
NFKB1-211ENST00000513803 SEC62Q99442 399 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms