RNA–Protein interactions for RNA: ENST00000513757.5

LPCAT1-205, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 4

Gene LPCAT1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-205ENST00000513757 KRT23Q9C075 422 aa11.34□□□□□ -0.59
LPCAT1-205ENST00000513757 KCNH6Q9H252 994 aa11.34□□□□□ -0.59
LPCAT1-205ENST00000513757 TUT1Q9H6E5 874 aaKnown RBP11.34□□□□□ -0.59
LPCAT1-205ENST00000513757 CNNM2Q9H8M5 875 aa11.34□□□□□ -0.59
LPCAT1-205ENST00000513757 MLXIPQ9HAP2 919 aa11.34□□□□□ -0.59
LPCAT1-205ENST00000513757 ZSWIM5Q9P217 1185 aa11.34□□□□□ -0.59
LPCAT1-205ENST00000513757 PCDHA1Q9Y5I3 950 aa11.34□□□□□ -0.59
LPCAT1-205ENST00000513757 KAT6AQ92794 2004 aa11.34□□□□□ -0.59
LPCAT1-205ENST00000513757 POTEB3A0JP26 581 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 HIP1O00291 1037 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 DCXO43602 365 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 NCK2O43639 380 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 PPP1R11O60927 126 aaPredicted RBP11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 SMIM10L2AP0DMW4 78 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 SMIM10L2BP0DMW5 78 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 GNAT1P11488 350 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 SP2Q02086 613 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 IMMTQ16891 758 aaKnown RBP11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 CSPP1Q1MSJ5 1256 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 IFIT1BQ5T764 474 aaKnown RBP11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 POTEBQ6S5H4 581 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 TMEM192Q8IY95 271 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 STAG2Q8N3U4 1231 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 IL31RAQ8NI17 732 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 APBB2Q92870 758 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 USP26Q9BXU7 913 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 RNPEPQ9H4A4 650 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 NSUN3Q9H649 340 aaKnown RBP11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 DIAPH3Q9NSV4 1193 aa11.33□□□□□ -0.6
LPCAT1-205ENST00000513757 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 H3BQ06 376 aaPredicted RBP11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 GCOM1H8Y6P7 765 aaPredicted RBP11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 TREHO43280 583 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 STAM2O75886 525 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 LGALS2P05162 132 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 RB1P06400 928 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 POLR2MP0CAP2 368 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 HOXA13P31271 388 aaPredicted RBP11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 ICAM3P32942 547 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 RRP1P56182 461 aaKnown RBP11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 NEDD9Q14511 834 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 GNPTABQ3T906 1256 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 TCEAL5Q5H9L2 206 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 FAM26DQ5JW98 314 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 IFIH1Q9BYX4 1025 aaKnown RBP11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 LNPKQ9C0E8 428 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 LMAN2LQ9H0V9 348 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 OSBPL3Q9H4L5 887 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 MAD2L2Q9UI95 211 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 RWDD3Q9Y3V2 267 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 CACNA1HO95180 2353 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 ZDBF2Q9HCK1 2354 aa11.32□□□□□ -0.6
LPCAT1-205ENST00000513757 PALM3A6NDB9 673 aaPredicted RBP11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 C19orf67A6NJJ6 358 aa11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 C5orf67F2Z3F1 127 aa11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 NOP56O00567 594 aaKnown RBP11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 SORBS3O60504 671 aa11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 ZP2Q05996 745 aa11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 AAMPQ13685 434 aa11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 SEC23AQ15436 765 aa11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 CWC27Q6UX04 472 aaKnown RBP11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 METTL7BQ6UX53 244 aa11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 ALYREFQ86V81 257 aaKnown RBP11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 ADHFE1Q8IWW8 467 aa11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 SMC5Q8IY18 1101 aa11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 GPKOWQ92917 476 aaPredicted RBP eCLIP11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 IL17RAQ96F46 866 aa11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 INPP4AQ96PE3 977 aaPredicted RBP11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 UIMC1Q96RL1 719 aa11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 UPF3BQ9BZI7 483 aaKnown RBP11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 RIOX1Q9H6W3 641 aa11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 ZNF215Q9UL58 517 aaPredicted RBP11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 TTC3P53804 2025 aa11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 FRMPD4Q14CM0 1322 aa11.31□□□□□ -0.6
LPCAT1-205ENST00000513757 TECTAO75443 2155 aa11.3□□□□□ -0.6
LPCAT1-205ENST00000513757 SPATA31C2B4DYI2 1134 aa11.3□□□□□ -0.6
LPCAT1-205ENST00000513757 FIBPO43427 364 aa11.3□□□□□ -0.6
LPCAT1-205ENST00000513757 UPP2O95045 317 aa11.3□□□□□ -0.6
LPCAT1-205ENST00000513757 CTSHP09668 335 aa11.3□□□□□ -0.6
LPCAT1-205ENST00000513757 ADAM17P78536 824 aa11.3□□□□□ -0.6
LPCAT1-205ENST00000513757 RPAINQ86UA6 219 aa11.3□□□□□ -0.6
LPCAT1-205ENST00000513757 FCHSD1Q86WN1 690 aa11.3□□□□□ -0.6
LPCAT1-205ENST00000513757 PLEKHM2Q8IWE5 1019 aa11.3□□□□□ -0.6
LPCAT1-205ENST00000513757 FIBCD1Q8N539 461 aa11.3□□□□□ -0.6
LPCAT1-205ENST00000513757 POP1Q99575 1024 aaKnown RBP11.3□□□□□ -0.6
LPCAT1-205ENST00000513757 GPR20Q99678 358 aa11.3□□□□□ -0.6
LPCAT1-205ENST00000513757 C11orf84Q9BUA3 381 aaPredicted RBP11.3□□□□□ -0.6
LPCAT1-205ENST00000513757 SETD4Q9NVD3 440 aa11.3□□□□□ -0.6
LPCAT1-205ENST00000513757 CLDND1Q9NY35 253 aa11.3□□□□□ -0.6
LPCAT1-205ENST00000513757 ATG2AQ2TAZ0 1938 aa11.29□□□□□ -0.6
LPCAT1-205ENST00000513757 PNMA6FA0A0J9YX94 578 aa11.29□□□□□ -0.6
LPCAT1-205ENST00000513757 CTNNB1P35222 781 aa11.29□□□□□ -0.6
LPCAT1-205ENST00000513757 BMPR1AP36894 532 aa11.29□□□□□ -0.6
LPCAT1-205ENST00000513757 MRPS9P82933 396 aaKnown RBP11.29□□□□□ -0.6
LPCAT1-205ENST00000513757 GRM4Q14833 912 aa11.29□□□□□ -0.6
LPCAT1-205ENST00000513757 SLC35G1Q2M3R5 365 aa11.29□□□□□ -0.6
LPCAT1-205ENST00000513757 CTC1Q2NKJ3 1217 aa11.29□□□□□ -0.6
LPCAT1-205ENST00000513757 XRRA1Q6P2D8 792 aa11.29□□□□□ -0.6
LPCAT1-205ENST00000513757 EP400NLQ6ZTU2 488 aa11.29□□□□□ -0.6
LPCAT1-205ENST00000513757 CYFIP1Q7L576 1253 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms