RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 CPT1AP50416 773 aa23.84■■□□□ 1.41
NEIL3-202ENST00000513321 ITGB3BPQ13352 177 aaPredicted RBP23.84■■□□□ 1.41
NEIL3-202ENST00000513321 CCSAPQ6IQ19 270 aaPredicted RBP23.84■■□□□ 1.41
NEIL3-202ENST00000513321 METTL7BQ6UX53 244 aa23.84■■□□□ 1.41
NEIL3-202ENST00000513321 MTMR6Q9Y217 621 aa23.84■■□□□ 1.41
NEIL3-202ENST00000513321 MSH4O15457 936 aa23.83■■□□□ 1.41
NEIL3-202ENST00000513321 SLC37A4O43826 429 aa23.83■■□□□ 1.41
NEIL3-202ENST00000513321 HSDL1Q3SXM5 330 aa23.83■■□□□ 1.41
NEIL3-202ENST00000513321 BRDTQ58F21 947 aaPredicted RBP23.83■■□□□ 1.41
NEIL3-202ENST00000513321 FERMT3Q86UX7 667 aa23.83■■□□□ 1.41
NEIL3-202ENST00000513321 PCSK9Q8NBP7 692 aaKnown RBP23.83■■□□□ 1.41
NEIL3-202ENST00000513321 SDF4Q9BRK5 362 aa23.83■■□□□ 1.41
NEIL3-202ENST00000513321 TSEN34Q9BSV6 310 aaKnown RBP23.83■■□□□ 1.41
NEIL3-202ENST00000513321 NOL7Q9UMY1 257 aaKnown RBP23.83■■□□□ 1.41
NEIL3-202ENST00000513321 NFASCO94856 1347 aa23.82■■□□□ 1.4
NEIL3-202ENST00000513321 ANP32AP39687 249 aaKnown RBP23.82■■□□□ 1.4
NEIL3-202ENST00000513321 PPTC7Q8NI37 304 aa23.82■■□□□ 1.4
NEIL3-202ENST00000513321 DIS3LQ8TF46 1054 aaKnown RBP23.82■■□□□ 1.4
NEIL3-202ENST00000513321 PAWRQ96IZ0 340 aaKnown RBP23.82■■□□□ 1.4
NEIL3-202ENST00000513321 DHX15O43143 795 aaKnown RBP23.81■■□□□ 1.4
NEIL3-202ENST00000513321 ZEB2O60315 1214 aa23.81■■□□□ 1.4
NEIL3-202ENST00000513321 ASGR1P07306 291 aa23.81■■□□□ 1.4
NEIL3-202ENST00000513321 TRAPPC10P48553 1259 aa23.81■■□□□ 1.4
NEIL3-202ENST00000513321 TOB1P50616 345 aaPredicted RBP23.81■■□□□ 1.4
NEIL3-202ENST00000513321 ACLYP53396 1101 aa23.81■■□□□ 1.4
NEIL3-202ENST00000513321 SP4Q02446 784 aa23.81■■□□□ 1.4
NEIL3-202ENST00000513321 TBC1D22BQ9NU19 505 aa23.81■■□□□ 1.4
NEIL3-202ENST00000513321 TELO2Q9Y4R8 837 aa23.81■■□□□ 1.4
NEIL3-202ENST00000513321 FRMPD3Q5JV73 1810 aa23.81■■□□□ 1.4
NEIL3-202ENST00000513321 MMP3P08254 477 aa23.8■■□□□ 1.4
NEIL3-202ENST00000513321 PDIA4P13667 645 aaKnown RBP23.8■■□□□ 1.4
NEIL3-202ENST00000513321 ZNF174Q15697 407 aa23.8■■□□□ 1.4
NEIL3-202ENST00000513321 TTC38Q5R3I4 469 aa23.8■■□□□ 1.4
NEIL3-202ENST00000513321 ETNPPLQ8TBG4 499 aa23.8■■□□□ 1.4
NEIL3-202ENST00000513321 SLC5A5Q92911 643 aa23.8■■□□□ 1.4
NEIL3-202ENST00000513321 GJA10Q969M2 543 aa23.8■■□□□ 1.4
NEIL3-202ENST00000513321 JPH1Q9HDC5 661 aaPredicted RBP23.8■■□□□ 1.4
NEIL3-202ENST00000513321 PHF24Q9UPV7 400 aa23.8■■□□□ 1.4
NEIL3-202ENST00000513321 MOXD2PA6NHM9 499 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 DDX39AO00148 427 aaKnown RBP23.79■■□□□ 1.4
NEIL3-202ENST00000513321 NOP56O00567 594 aaKnown RBP23.79■■□□□ 1.4
NEIL3-202ENST00000513321 CAPN15O75808 1086 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 MYL3P08590 195 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 MCM7P33993 719 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 CXCL17Q6UXB2 119 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 BRAPQ7Z569 592 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 POTEDQ86YR6 584 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 FERMT2Q96AC1 680 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 GPR20Q99678 358 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 KCNMB3Q9NPA1 279 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 SLC9A2Q9UBY0 812 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 KPNA6O60684 536 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 PPFIA4O75335 1185 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 NBR1Q14596 966 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 DGKDQ16760 1214 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 RILPL1Q5EBL4 403 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 NECAB2Q7Z6G3 386 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 UBE2Q1Q7Z7E8 422 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 FAM20AQ96MK3 541 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 RIT2Q99578 217 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 SENP6Q9GZR1 1112 aaPredicted RBP23.79■■□□□ 1.4
NEIL3-202ENST00000513321 TSHZ2Q9NRE2 1034 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 POLR3EQ9NVU0 708 aa23.79■■□□□ 1.4
NEIL3-202ENST00000513321 MARCH6O60337 910 aa23.78■■□□□ 1.4
NEIL3-202ENST00000513321 NEMFO60524 1076 aa23.78■■□□□ 1.4
NEIL3-202ENST00000513321 COL6A1P12109 1028 aa23.78■■□□□ 1.4
NEIL3-202ENST00000513321 RESTQ13127 1097 aa23.78■■□□□ 1.4
NEIL3-202ENST00000513321 LRCH2Q5VUJ6 765 aa23.78■■□□□ 1.4
NEIL3-202ENST00000513321 HAS1Q92839 578 aa23.78■■□□□ 1.4
NEIL3-202ENST00000513321 C11orf49Q9H6J7 331 aa23.78■■□□□ 1.4
NEIL3-202ENST00000513321 GSTTP1A0A1W2PQM5 241 aa23.77■■□□□ 1.4
NEIL3-202ENST00000513321 TBX3O15119 743 aa23.77■■□□□ 1.4
NEIL3-202ENST00000513321 GAS7O60861 476 aa23.77■■□□□ 1.4
NEIL3-202ENST00000513321 PSMD10O75832 226 aa23.77■■□□□ 1.4
NEIL3-202ENST00000513321 HOXD8P13378 290 aaPredicted RBP23.77■■□□□ 1.4
NEIL3-202ENST00000513321 PURAQ00577 322 aaKnown RBP23.77■■□□□ 1.4
NEIL3-202ENST00000513321 SEPT1Q8WYJ6 367 aa23.77■■□□□ 1.4
NEIL3-202ENST00000513321 PCDHB6Q9Y5E3 794 aa23.77■■□□□ 1.4
NEIL3-202ENST00000513321 A0A1W2PQ45 241 aaPredicted RBP23.76■■□□□ 1.39
NEIL3-202ENST00000513321 A0A1W2PQY0 241 aa23.76■■□□□ 1.39
NEIL3-202ENST00000513321 BAG4O95429 457 aaKnown RBP23.76■■□□□ 1.39
NEIL3-202ENST00000513321 CCNE2O96020 404 aa23.76■■□□□ 1.39
NEIL3-202ENST00000513321 ACTR2P61160 394 aa23.76■■□□□ 1.39
NEIL3-202ENST00000513321 ORC2Q13416 577 aaPredicted RBP23.76■■□□□ 1.39
NEIL3-202ENST00000513321 CALCRLQ16602 461 aa23.76■■□□□ 1.39
NEIL3-202ENST00000513321 FOXD4L5Q5VV16 416 aaPredicted RBP23.76■■□□□ 1.39
NEIL3-202ENST00000513321 FOXD4L4Q8WXT5 416 aaPredicted RBP23.76■■□□□ 1.39
NEIL3-202ENST00000513321 VTI1AQ96AJ9 217 aa23.76■■□□□ 1.39
NEIL3-202ENST00000513321 GLT1D1Q96MS3 346 aa23.76■■□□□ 1.39
NEIL3-202ENST00000513321 TEKT3Q9BXF9 490 aa23.76■■□□□ 1.39
NEIL3-202ENST00000513321 ZSCAN22P10073 491 aaPredicted RBP23.75■■□□□ 1.39
NEIL3-202ENST00000513321 PKP1Q13835 747 aa23.75■■□□□ 1.39
NEIL3-202ENST00000513321 MTG1Q9BT17 334 aaPredicted RBP23.75■■□□□ 1.39
NEIL3-202ENST00000513321 TMEM60Q9H2L4 133 aa23.75■■□□□ 1.39
NEIL3-202ENST00000513321 ZSCAN16Q9H4T2 348 aaPredicted RBP23.75■■□□□ 1.39
NEIL3-202ENST00000513321 DAXXQ9UER7 740 aaPredicted RBP23.75■■□□□ 1.39
NEIL3-202ENST00000513321 TCEAL9Q9UHQ7 104 aa23.75■■□□□ 1.39
NEIL3-202ENST00000513321 RBM19Q9Y4C8 960 aaKnown RBP23.75■■□□□ 1.39
NEIL3-202ENST00000513321 CABYRO75952 493 aa23.74■■□□□ 1.39
NEIL3-202ENST00000513321 TCF7P36402 384 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms