RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 NLRX1Q86UT6 975 aa12.66□□□□□ -0.38
SKP2-207ENST00000513263 SMARCC2Q8TAQ2 1214 aa12.66□□□□□ -0.38
SKP2-207ENST00000513263 SEPT8Q92599 483 aa12.66□□□□□ -0.38
SKP2-207ENST00000513263 ATP6V0A1Q93050 837 aa12.66□□□□□ -0.38
SKP2-207ENST00000513263 YTHDC1Q96MU7 727 aaKnown RBP12.66□□□□□ -0.38
SKP2-207ENST00000513263 EHMT1Q9H9B1 1298 aa12.66□□□□□ -0.38
SKP2-207ENST00000513263 MYH9P35579 1960 aaKnown RBP12.66□□□□□ -0.38
SKP2-207ENST00000513263 E7EWF7 191 aa12.65□□□□□ -0.38
SKP2-207ENST00000513263 SGSM2O43147 1006 aa12.65□□□□□ -0.38
SKP2-207ENST00000513263 PPP1R11O60927 126 aaPredicted RBP12.65□□□□□ -0.38
SKP2-207ENST00000513263 RGS20O76081 388 aa12.65□□□□□ -0.38
SKP2-207ENST00000513263 CHMLP26374 656 aa12.65□□□□□ -0.38
SKP2-207ENST00000513263 ERVK-21P61565 698 aa12.65□□□□□ -0.38
SKP2-207ENST00000513263 DEFB103AP81534 67 aa12.65□□□□□ -0.38
SKP2-207ENST00000513263 GRB10Q13322 594 aa12.65□□□□□ -0.38
SKP2-207ENST00000513263 PTPROQ16827 1216 aa12.65□□□□□ -0.38
SKP2-207ENST00000513263 TRIM71Q2Q1W2 868 aaKnown RBP12.65□□□□□ -0.38
SKP2-207ENST00000513263 ZNF618Q5T7W0 954 aa12.65□□□□□ -0.38
SKP2-207ENST00000513263 FCHSD1Q86WN1 690 aa12.65□□□□□ -0.38
SKP2-207ENST00000513263 TNPO1Q92973 898 aaKnown RBP12.65□□□□□ -0.38
SKP2-207ENST00000513263 TMEM87BQ96K49 555 aa12.65□□□□□ -0.38
SKP2-207ENST00000513263 C16orf70Q9BSU1 422 aa12.65□□□□□ -0.38
SKP2-207ENST00000513263 CERS4Q9HA82 394 aa12.65□□□□□ -0.38
SKP2-207ENST00000513263 TTC3P53804 2025 aa12.64□□□□□ -0.39
SKP2-207ENST00000513263 CYTH3O43739 400 aa12.64□□□□□ -0.39
SKP2-207ENST00000513263 SMIM10L2AP0DMW4 78 aa12.64□□□□□ -0.39
SKP2-207ENST00000513263 SMIM10L2BP0DMW5 78 aa12.64□□□□□ -0.39
SKP2-207ENST00000513263 BMP1P13497 986 aa12.64□□□□□ -0.39
SKP2-207ENST00000513263 MCM5P33992 734 aa12.64□□□□□ -0.39
SKP2-207ENST00000513263 TIGD5Q53EQ6 642 aa12.64□□□□□ -0.39
SKP2-207ENST00000513263 PLEKHG4Q58EX7 1191 aa12.64□□□□□ -0.39
SKP2-207ENST00000513263 TAF2Q6P1X5 1199 aa12.64□□□□□ -0.39
SKP2-207ENST00000513263 FAM43BQ6ZT52 329 aaPredicted RBP12.64□□□□□ -0.39
SKP2-207ENST00000513263 RSPH3Q86UC2 560 aa12.64□□□□□ -0.39
SKP2-207ENST00000513263 ZNF654Q8IZM8 581 aa12.64□□□□□ -0.39
SKP2-207ENST00000513263 GPRASP2Q96D09 838 aa12.64□□□□□ -0.39
SKP2-207ENST00000513263 RWDD3Q9Y3V2 267 aa12.64□□□□□ -0.39
SKP2-207ENST00000513263 NRCAMQ92823 1304 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 LINC01553A4QN01 128 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 CCDC69A6NI79 296 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 SPATA31C2B4DYI2 1134 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 MAFGO15525 162 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 LPXNO60711 386 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 COL9A1P20849 921 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 HTRA4P83105 476 aaPredicted RBP12.63□□□□□ -0.39
SKP2-207ENST00000513263 GPNMBQ14956 572 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 PUS10Q3MIT2 529 aaKnown RBP12.63□□□□□ -0.39
SKP2-207ENST00000513263 TRAF7Q6Q0C0 670 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 MB21D2Q8IYB1 491 aaPredicted RBP12.63□□□□□ -0.39
SKP2-207ENST00000513263 MYOCDQ8IZQ8 938 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 FBXO22Q8NEZ5 403 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 IL31RAQ8NI17 732 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 GDPD5Q8WTR4 605 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 PPP1R13LQ8WUF5 828 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 MAP4K1Q92918 833 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 IL25Q9H293 177 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 FAM50BQ9Y247 325 aa12.63□□□□□ -0.39
SKP2-207ENST00000513263 ATG2AQ2TAZ0 1938 aa12.62□□□□□ -0.39
SKP2-207ENST00000513263 EPOPA6NHQ4 379 aa12.62□□□□□ -0.39
SKP2-207ENST00000513263 SPDYE3A6NKU9 549 aa12.62□□□□□ -0.39
SKP2-207ENST00000513263 LIFRP42702 1097 aa12.62□□□□□ -0.39
SKP2-207ENST00000513263 MRPS9P82933 396 aaKnown RBP12.62□□□□□ -0.39
SKP2-207ENST00000513263 TFF2Q03403 129 aa12.62□□□□□ -0.39
SKP2-207ENST00000513263 MBTPS1Q14703 1052 aa12.62□□□□□ -0.39
SKP2-207ENST00000513263 NFXL1Q6ZNB6 911 aa12.62□□□□□ -0.39
SKP2-207ENST00000513263 CYFIP1Q7L576 1253 aa12.62□□□□□ -0.39
SKP2-207ENST00000513263 RPAINQ86UA6 219 aa12.62□□□□□ -0.39
SKP2-207ENST00000513263 SP7Q8TDD2 431 aaPredicted RBP12.62□□□□□ -0.39
SKP2-207ENST00000513263 YME1L1Q96TA2 773 aa12.62□□□□□ -0.39
SKP2-207ENST00000513263 GPR20Q99678 358 aa12.62□□□□□ -0.39
SKP2-207ENST00000513263 LY9Q9HBG7 655 aa12.62□□□□□ -0.39
SKP2-207ENST00000513263 ERAP1Q9NZ08 941 aa12.62□□□□□ -0.39
SKP2-207ENST00000513263 ARIH1Q9Y4X5 557 aaPredicted RBP12.62□□□□□ -0.39
SKP2-207ENST00000513263 RBM8AQ9Y5S9 174 aaKnown RBP12.62□□□□□ -0.39
SKP2-207ENST00000513263 WDR81Q562E7 1941 aa12.62□□□□□ -0.39
SKP2-207ENST00000513263 PIEZO1Q92508 2521 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 KIAA1671Q9BY89 1806 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 LCHNA4D1U4 455 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 hCG_1984214I3L0E3 225 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 RFXAPO00287 272 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 NCK2O43639 380 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 PDE4AP27815 886 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 KCNQ1P51787 676 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 SP2Q02086 613 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 PTH1RQ03431 593 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 MKRN4PQ13434 485 aaPredicted RBP12.61□□□□□ -0.39
SKP2-207ENST00000513263 RNF20Q5VTR2 975 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 ZNF713Q8N859 430 aaPredicted RBP12.61□□□□□ -0.39
SKP2-207ENST00000513263 DBF4BQ8NFT6 615 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 IGDCC4Q8TDY8 1250 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 IFIH1Q9BYX4 1025 aaKnown RBP12.61□□□□□ -0.39
SKP2-207ENST00000513263 GLT8D2Q9H1C3 349 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 RNPEPQ9H4A4 650 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 SUGCTQ9HAC7 445 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 HCN4Q9Y3Q4 1203 aa12.61□□□□□ -0.39
SKP2-207ENST00000513263 MYO7AQ13402 2215 aa12.6□□□□□ -0.39
SKP2-207ENST00000513263 TREHO43280 583 aa12.6□□□□□ -0.39
SKP2-207ENST00000513263 PRC1O43663 620 aa12.6□□□□□ -0.39
SKP2-207ENST00000513263 ARHGAP4P98171 946 aa12.6□□□□□ -0.39
SKP2-207ENST00000513263 MTMR1Q13613 665 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms