RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 ABCB6Q9NP58 842 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 LGALS16A8MUM7 142 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 KIAA0754O94854 1291 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 NR1I3Q14994 352 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 PEX26Q7Z412 305 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 DAAM2Q86T65 1068 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 CHURC1Q8WUH1 139 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 AK8Q96MA6 479 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 JMJD4Q9H9V9 463 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 PICK1Q9NRD5 415 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 EHD2Q9NZN4 543 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 USTQ9Y2C2 406 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 DDTLA6NHG4 134 aaPredicted RBP13.12□□□□□ -0.31
PRDM16-207ENST00000512462 SPOPO43791 374 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 CDR1P51861 262 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 DDR1Q08345 913 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 COASYQ13057 564 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 MAN2A1Q16706 1144 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 SBK1Q52WX2 424 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 COL23A1Q86Y22 540 aaPredicted RBP13.12□□□□□ -0.31
PRDM16-207ENST00000512462 CCDC51Q96ER9 411 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 COL4A3BPQ9Y5P4 624 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 ABCB11O95342 1321 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 GOLGB1Q14789 3259 aaKnown RBP13.11□□□□□ -0.31
PRDM16-207ENST00000512462 A0A1B0GTH6 734 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 PLCB3Q01970 1234 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 ZNF543Q08ER8 600 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 CALUO43852 315 aaPredicted RBP13.11□□□□□ -0.31
PRDM16-207ENST00000512462 NDUFB10O96000 172 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 ATP1A1P05023 1023 aaKnown RBP13.11□□□□□ -0.31
PRDM16-207ENST00000512462 ACTN1P12814 892 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 CFAP58Q5T655 872 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 DEFB132Q7Z7B7 95 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 GLIS3Q8NEA6 775 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 HOOK2Q96ED9 719 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 RAVER2Q9HCJ3 691 aaKnown RBP13.11□□□□□ -0.31
PRDM16-207ENST00000512462 SWAP70Q9UH65 585 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 ANAPC4Q9UJX5 808 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 CNTNAP4Q9C0A0 1308 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 TRIM49P0CI25 452 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 TRIM49CP0CI26 452 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 CTNNA2P26232 953 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 RXRBP28702 533 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 GUCY2DQ02846 1103 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 VWA3BQ502W6 1294 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
PRDM16-207ENST00000512462 PPP4R3AQ6IN85 833 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 NFRKBQ6P4R8 1299 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 C16orf86Q6ZW13 317 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 TICAM2Q86XR7 235 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 PANX2Q96RD6 677 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 TMEM39BQ9GZU3 492 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 PHLPP2Q6ZVD8 1323 aa13.11□□□□□ -0.31
PRDM16-207ENST00000512462 GPR75-ASB3A0A0A6YYF3 556 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 POLD1P28340 1107 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 RPS6KA1Q15418 735 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 ADSSL1Q8N142 457 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 CYP2W1Q8TAV3 490 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 ACER1Q8TDN7 264 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 KRT12Q99456 494 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 CHORDC1Q9UHD1 332 aaPredicted RBP13.1□□□□□ -0.31
PRDM16-207ENST00000512462 FAN1Q9Y2M0 1017 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 ZBED6P86452 979 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 ARHGEF16Q5VV41 709 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 SELENOOQ9BVL4 669 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 FZD1Q9UP38 647 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.1□□□□□ -0.31
PRDM16-207ENST00000512462 ATP6V0A2Q9Y487 856 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 KDM3AQ9Y4C1 1321 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 ANKRD62A6NC57 917 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 LAD1O00515 517 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 MCM3P25205 808 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 NMT1P30419 496 aaKnown RBP13.1□□□□□ -0.31
PRDM16-207ENST00000512462 STAT1P42224 750 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 PRMT6Q96LA8 375 aaPredicted RBP13.1□□□□□ -0.31
PRDM16-207ENST00000512462 AP1M1Q9BXS5 423 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 PRM3Q9NNZ6 103 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 GCNT4Q9P109 453 aa13.1□□□□□ -0.31
PRDM16-207ENST00000512462 SHTN1A0MZ66 631 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 GOLGA6BA6NDN3 693 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 ABL1P00519 1130 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 TNNI1P19237 187 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 SSTR3P32745 418 aaPredicted RBP13.09□□□□□ -0.31
PRDM16-207ENST00000512462 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
PRDM16-207ENST00000512462 ZNF746Q6NUN9 644 aaPredicted RBP13.09□□□□□ -0.31
PRDM16-207ENST00000512462 NYAP1Q6ZVC0 841 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 REXO1L1PQ8IX06 675 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 SP8Q8IXZ3 490 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 DYDC2Q96IM9 177 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 FNBP1Q96RU3 617 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 PAIP2Q9BPZ3 127 aaKnown RBP13.09□□□□□ -0.31
PRDM16-207ENST00000512462 INTS13Q9NVM9 706 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 UNC13DQ70J99 1090 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 PODNQ7Z5L7 613 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 RAD54LQ92698 747 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 ERVK-24P63145 666 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 SLC10A5Q5PT55 438 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 TRIM58Q8NG06 486 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 RIN2Q8WYP3 895 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms