RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 CCL23P55773 120 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 MRPS9P82933 396 aaKnown RBP6.73□□□□□ -1.33
RNF4-217ENST00000511892 EXOSC10Q01780 885 aaKnown RBP6.73□□□□□ -1.33
RNF4-217ENST00000511892 ADCK5Q3MIX3 580 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 TSGA10IPQ3SY00 556 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 MYSM1Q5VVJ2 828 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 ZNF365Q70YC5 407 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 SGMS1Q86VZ5 419 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 FCHSD1Q86WN1 690 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 RAB11FIP4Q86YS3 637 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 TMTC2Q8N394 836 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 TMEM199Q8N511 208 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 CTCFLQ8NI51 663 aaPredicted RBP6.73□□□□□ -1.33
RNF4-217ENST00000511892 SCLYQ96I15 445 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 TCEANC2Q96MN5 208 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 CTAGE1Q96RT6 745 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 BCAS3Q9H6U6 928 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 IL23AQ9NPF7 189 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 CXXC1Q9P0U4 656 aaPredicted RBP6.73□□□□□ -1.33
RNF4-217ENST00000511892 STXBP5LQ9Y2K9 1186 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 MRVI1Q9Y6F6 885 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 EVPLQ92817 2033 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.72□□□□□ -1.33
RNF4-217ENST00000511892 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.72□□□□□ -1.33
RNF4-217ENST00000511892 hCG_1642624A0A1W2PR95 340 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 CCDC69A6NI79 296 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 RBAK-RBAKDNI3L0D1 243 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 PIK3CDO00329 1044 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 MEIS2O14770 477 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 SORBS3O60504 671 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 SUPT20HL2P0C7V6 817 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 HOXD8P13378 290 aaPredicted RBP6.72□□□□□ -1.33
RNF4-217ENST00000511892 CASTP20810 708 aaKnown RBP6.72□□□□□ -1.33
RNF4-217ENST00000511892 UBA1P22314 1058 aaKnown RBP6.72□□□□□ -1.33
RNF4-217ENST00000511892 CCND2P30279 289 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 GNAQP50148 359 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 PTPN11Q06124 597 aaPredicted RBP6.72□□□□□ -1.33
RNF4-217ENST00000511892 TRAF1Q13077 416 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 SEMA3FQ13275 785 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 LAMC2Q13753 1193 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 HSDL1Q3SXM5 330 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 C8orf34Q49A92 452 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 BRDTQ58F21 947 aaPredicted RBP6.72□□□□□ -1.33
RNF4-217ENST00000511892 FAM47CQ5HY64 1035 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 CELF3Q5SZQ8 465 aaKnown RBP6.72□□□□□ -1.33
RNF4-217ENST00000511892 ZNF697Q5TEC3 545 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 GDF6Q6KF10 455 aaPredicted RBP6.72□□□□□ -1.33
RNF4-217ENST00000511892 PSRC1Q6PGN9 363 aaPredicted RBP6.72□□□□□ -1.33
RNF4-217ENST00000511892 USP17L6PQ6QN14 398 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 NFXL1Q6ZNB6 911 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 TMTC3Q6ZXV5 915 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 DHX37Q8IY37 1157 aaKnown RBP6.72□□□□□ -1.33
RNF4-217ENST00000511892 FANCBQ8NB91 859 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 PPTC7Q8NI37 304 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 HERVK_113Q902F9 699 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 KCNB2Q92953 911 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 RRP36Q96EU6 259 aaKnown RBP6.72□□□□□ -1.33
RNF4-217ENST00000511892 NEK1Q96PY6 1258 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 LZTS2Q9BRK4 669 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 BRPF3Q9ULD4 1205 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 TELO2Q9Y4R8 837 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 SLC12A7Q9Y666 1083 aa6.72□□□□□ -1.33
RNF4-217ENST00000511892 SPATA31C2B4DYI2 1134 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 HAS3O00219 553 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 GGPS1O95749 300 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 FGBP02675 491 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 IQCF3P0C7M6 154 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 ZNF286BP0CG31 522 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 CALM1P0DP23 149 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 CALM2P0DP24 149 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 CALM3P0DP25 149 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 TGFB3P10600 412 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 CPA1P15085 419 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 COL9A1P20849 921 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 DNAJB2P25686 324 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 ICAM3P32942 547 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 CHMP4BP1P59074 171 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 FUT2Q10981 343 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 HIC1Q14526 733 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 DGKDQ16760 1214 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 KIAA0753Q2KHM9 967 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 RNF20Q5VTR2 975 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 KCNV1Q6PIU1 500 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 DHX32Q7L7V1 743 aaKnown RBP6.71□□□□□ -1.34
RNF4-217ENST00000511892 OTOP2Q7RTS6 562 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 SESTD1Q86VW0 696 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 MICU3Q86XE3 530 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 CCDC82Q8N4S0 544 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 SMARCC2Q8TAQ2 1214 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 DHX38Q92620 1227 aaKnown RBP6.71□□□□□ -1.34
RNF4-217ENST00000511892 IPO9Q96P70 1041 aaKnown RBP6.71□□□□□ -1.34
RNF4-217ENST00000511892 INPP4AQ96PE3 977 aaPredicted RBP6.71□□□□□ -1.34
RNF4-217ENST00000511892 CDX2Q99626 313 aaPredicted RBP6.71□□□□□ -1.34
RNF4-217ENST00000511892 PBX4Q9BYU1 374 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 UPF2Q9HAU5 1272 aaKnown RBP6.71□□□□□ -1.34
RNF4-217ENST00000511892 FAM217BQ9NTX9 383 aaPredicted RBP6.71□□□□□ -1.34
RNF4-217ENST00000511892 HDAC6Q9UBN7 1215 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 SEC63Q9UGP8 760 aaKnown RBP6.71□□□□□ -1.34
RNF4-217ENST00000511892 CNTNAP5Q8WYK1 1306 aa6.71□□□□□ -1.34
RNF4-217ENST00000511892 NLRC5Q86WI3 1866 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms