RNA–Protein interactions for RNA: ENST00000511871.1

SIM1-204, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 1 (best)

Gene SIM1, Length 1,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-204ENST00000511871 SH3RF1Q7Z6J0 888 aa18.32■□□□□ 0.52
SIM1-204ENST00000511871 FAM126BQ8IXS8 530 aa18.32■□□□□ 0.52
SIM1-204ENST00000511871 KAT2BQ92831 832 aa18.32■□□□□ 0.52
SIM1-204ENST00000511871 LLPHQ9BRT6 129 aaKnown RBP18.32■□□□□ 0.52
SIM1-204ENST00000511871 KCNH7Q9NS40 1196 aa18.32■□□□□ 0.52
SIM1-204ENST00000511871 DCDC2CA8MYV0 355 aa18.31■□□□□ 0.52
SIM1-204ENST00000511871 EDIL3O43854 480 aa18.31■□□□□ 0.52
SIM1-204ENST00000511871 CLTBP09497 229 aa18.31■□□□□ 0.52
SIM1-204ENST00000511871 ARP10275 920 aa18.31■□□□□ 0.52
SIM1-204ENST00000511871 ZNF76P36508 570 aa18.31■□□□□ 0.52
SIM1-204ENST00000511871 PCDH10Q9P2E7 1040 aa18.31■□□□□ 0.52
SIM1-204ENST00000511871 IGLV3-22A0A075B6J6 115 aa18.31■□□□□ 0.52
SIM1-204ENST00000511871 FAM86B1E9PN63 330 aa18.31■□□□□ 0.52
SIM1-204ENST00000511871 CD2BP2O95400 341 aaKnown RBP18.31■□□□□ 0.52
SIM1-204ENST00000511871 CD4P01730 458 aa18.31■□□□□ 0.52
SIM1-204ENST00000511871 FAM86B2P0C5J1 330 aa18.31■□□□□ 0.52
SIM1-204ENST00000511871 CIITAP33076 1130 aa18.31■□□□□ 0.52
SIM1-204ENST00000511871 NBPF20Q3BBV1 942 aa18.31■□□□□ 0.52
SIM1-204ENST00000511871 GPR20Q99678 358 aa18.31■□□□□ 0.52
SIM1-204ENST00000511871 PRDM5Q9NQX1 630 aaPredicted RBP18.31■□□□□ 0.52
SIM1-204ENST00000511871 PKD2L1Q9P0L9 805 aa18.31■□□□□ 0.52
SIM1-204ENST00000511871 TELO2Q9Y4R8 837 aa18.31■□□□□ 0.52
SIM1-204ENST00000511871 TRIM43BA6NCK2 446 aa18.3■□□□□ 0.52
SIM1-204ENST00000511871 KIAA0355O15063 1070 aa18.3■□□□□ 0.52
SIM1-204ENST00000511871 ZNF286BP0CG31 522 aa18.3■□□□□ 0.52
SIM1-204ENST00000511871 PLA2G4DQ86XP0 818 aa18.3■□□□□ 0.52
SIM1-204ENST00000511871 TRIM43Q96BQ3 446 aaPredicted RBP18.3■□□□□ 0.52
SIM1-204ENST00000511871 AGO4Q9HCK5 861 aaKnown RBP18.3■□□□□ 0.52
SIM1-204ENST00000511871 PRKAG2Q9UGJ0 569 aa18.3■□□□□ 0.52
SIM1-204ENST00000511871 MYH9P35579 1960 aaKnown RBP18.3■□□□□ 0.52
SIM1-204ENST00000511871 HAS3O00219 553 aa18.29■□□□□ 0.52
SIM1-204ENST00000511871 NOP56O00567 594 aaKnown RBP18.29■□□□□ 0.52
SIM1-204ENST00000511871 TLR3O15455 904 aaKnown RBP18.29■□□□□ 0.52
SIM1-204ENST00000511871 F2P00734 622 aa18.29■□□□□ 0.52
SIM1-204ENST00000511871 USP11P51784 963 aa18.29■□□□□ 0.52
SIM1-204ENST00000511871 NFRKBQ6P4R8 1299 aa18.29■□□□□ 0.52
SIM1-204ENST00000511871 PPP1R13LQ8WUF5 828 aa18.29■□□□□ 0.52
SIM1-204ENST00000511871 GDF15Q99988 308 aa18.29■□□□□ 0.52
SIM1-204ENST00000511871 C16orf70Q9BSU1 422 aa18.29■□□□□ 0.52
SIM1-204ENST00000511871 TMEM39AQ9NV64 488 aa18.29■□□□□ 0.52
SIM1-204ENST00000511871 NFASCO94856 1347 aa18.29■□□□□ 0.52
SIM1-204ENST00000511871 LGALS2P05162 132 aa18.28■□□□□ 0.52
SIM1-204ENST00000511871 PSEN2P49810 448 aa18.28■□□□□ 0.52
SIM1-204ENST00000511871 PTPN11Q06124 597 aaPredicted RBP18.28■□□□□ 0.52
SIM1-204ENST00000511871 KRT25Q7Z3Z0 450 aa18.28■□□□□ 0.52
SIM1-204ENST00000511871 OXER1Q8TDS5 423 aa18.28■□□□□ 0.52
SIM1-204ENST00000511871 TBCKQ8TEA7 893 aa18.28■□□□□ 0.52
SIM1-204ENST00000511871 PRO3102Q9H379 93 aa18.28■□□□□ 0.52
SIM1-204ENST00000511871 TBX21Q9UL17 535 aa18.28■□□□□ 0.52
SIM1-204ENST00000511871 B4GALT4O60513 344 aa18.27■□□□□ 0.52
SIM1-204ENST00000511871 MAGEA10P43363 369 aaPredicted RBP18.27■□□□□ 0.52
SIM1-204ENST00000511871 MCM2P49736 904 aa18.27■□□□□ 0.52
SIM1-204ENST00000511871 SP4Q02446 784 aa18.27■□□□□ 0.52
SIM1-204ENST00000511871 ITGB3BPQ13352 177 aaPredicted RBP18.27■□□□□ 0.52
SIM1-204ENST00000511871 MFSD10Q14728 455 aa18.27■□□□□ 0.52
SIM1-204ENST00000511871 CHRDL2Q6WN34 429 aa18.27■□□□□ 0.52
SIM1-204ENST00000511871 TMX3Q96JJ7 454 aa18.27■□□□□ 0.52
SIM1-204ENST00000511871 KATNAL1Q9BW62 490 aa18.27■□□□□ 0.52
SIM1-204ENST00000511871 TRPV6Q9H1D0 765 aa18.27■□□□□ 0.52
SIM1-204ENST00000511871 GSTTP1A0A1W2PQM5 241 aa18.27■□□□□ 0.51
SIM1-204ENST00000511871 ITGB8P26012 769 aa18.27■□□□□ 0.51
SIM1-204ENST00000511871 CHMP4BP1P59074 171 aa18.27■□□□□ 0.51
SIM1-204ENST00000511871 HMGN5P82970 282 aaKnown RBP18.27■□□□□ 0.51
SIM1-204ENST00000511871 SETQ01105 290 aaPredicted RBP18.27■□□□□ 0.51
SIM1-204ENST00000511871 NONOQ15233 471 aaKnown RBP eCLIP18.27■□□□□ 0.51
SIM1-204ENST00000511871 KIAA0753Q2KHM9 967 aa18.27■□□□□ 0.51
SIM1-204ENST00000511871 FAM47CQ5HY64 1035 aa18.27■□□□□ 0.51
SIM1-204ENST00000511871 KRT40Q6A162 431 aa18.27■□□□□ 0.51
SIM1-204ENST00000511871 SESTD1Q86VW0 696 aa18.27■□□□□ 0.51
SIM1-204ENST00000511871 LENG9Q96B70 501 aa18.27■□□□□ 0.51
SIM1-204ENST00000511871 SDF4Q9BRK5 362 aa18.27■□□□□ 0.51
SIM1-204ENST00000511871 JPH1Q9HDC5 661 aaPredicted RBP18.27■□□□□ 0.51
SIM1-204ENST00000511871 SLC9A2Q9UBY0 812 aa18.27■□□□□ 0.51
SIM1-204ENST00000511871 COLQQ9Y215 455 aaPredicted RBP18.27■□□□□ 0.51
SIM1-204ENST00000511871 MMP1P03956 469 aa18.26■□□□□ 0.51
SIM1-204ENST00000511871 KRT2P35908 639 aa18.26■□□□□ 0.51
SIM1-204ENST00000511871 TCF7P36402 384 aaPredicted RBP18.26■□□□□ 0.51
SIM1-204ENST00000511871 FOSBP53539 338 aa18.26■□□□□ 0.51
SIM1-204ENST00000511871 MDM2Q00987 491 aaPredicted RBP18.26■□□□□ 0.51
SIM1-204ENST00000511871 PRR16Q569H4 304 aa18.26■□□□□ 0.51
SIM1-204ENST00000511871 SEPT1Q8WYJ6 367 aa18.26■□□□□ 0.51
SIM1-204ENST00000511871 TNFRSF25Q93038 417 aa18.26■□□□□ 0.51
SIM1-204ENST00000511871 TRMT13Q9NUP7 481 aaKnown RBP18.26■□□□□ 0.51
SIM1-204ENST00000511871 TRIOBPQ9H2D6 2365 aa18.25■□□□□ 0.51
SIM1-204ENST00000511871 CYP3A7-CYP3A51PA0A087WV96 503 aa18.25■□□□□ 0.51
SIM1-204ENST00000511871 CCDC194A0A1B0GVG4 234 aa18.25■□□□□ 0.51
SIM1-204ENST00000511871 H3BRB1 525 aa18.25■□□□□ 0.51
SIM1-204ENST00000511871 DHX15O43143 795 aaKnown RBP18.25■□□□□ 0.51
SIM1-204ENST00000511871 CYP3A7P24462 503 aa18.25■□□□□ 0.51
SIM1-204ENST00000511871 BMP8BP34820 402 aa18.25■□□□□ 0.51
SIM1-204ENST00000511871 TRIM29Q14134 588 aa18.25■□□□□ 0.51
SIM1-204ENST00000511871 INF2Q27J81 1249 aa18.25■□□□□ 0.51
SIM1-204ENST00000511871 UTP14CQ5TAP6 766 aaKnown RBP18.25■□□□□ 0.51
SIM1-204ENST00000511871 LBHD1Q9BQE6 289 aaPredicted RBP18.25■□□□□ 0.51
SIM1-204ENST00000511871 TUT1Q9H6E5 874 aaKnown RBP18.25■□□□□ 0.51
SIM1-204ENST00000511871 HDAC6Q9UBN7 1215 aa18.25■□□□□ 0.51
SIM1-204ENST00000511871 IPO5O00410 1097 aaKnown RBP18.24■□□□□ 0.51
SIM1-204ENST00000511871 RAG1P15918 1043 aa18.24■□□□□ 0.51
SIM1-204ENST00000511871 NR5A1Q13285 461 aa18.24■□□□□ 0.51
SIM1-204ENST00000511871 EARS2Q5JPH6 523 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms