RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 GLI4P10075 376 aa5.45□□□□□ -1.54
CALCOCO2-220ENST00000511816 ERVFRD-1P60508 538 aa5.45□□□□□ -1.54
CALCOCO2-220ENST00000511816 ZNF174Q15697 407 aa5.45□□□□□ -1.54
CALCOCO2-220ENST00000511816 ADGRF1Q5T601 910 aa5.45□□□□□ -1.54
CALCOCO2-220ENST00000511816 POU5F2Q8N7G0 328 aa5.45□□□□□ -1.54
CALCOCO2-220ENST00000511816 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.45□□□□□ -1.54
CALCOCO2-220ENST00000511816 INTS4Q96HW7 963 aaKnown RBP5.45□□□□□ -1.54
CALCOCO2-220ENST00000511816 PPARGC1AQ9UBK2 798 aaKnown RBP5.45□□□□□ -1.54
CALCOCO2-220ENST00000511816 B4GALT6Q9UBX8 382 aa5.45□□□□□ -1.54
CALCOCO2-220ENST00000511816 FBXL7Q9UJT9 491 aa5.45□□□□□ -1.54
CALCOCO2-220ENST00000511816 ATP8A1Q9Y2Q0 1164 aa5.45□□□□□ -1.54
CALCOCO2-220ENST00000511816 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.45□□□□□ -1.54
CALCOCO2-220ENST00000511816 NOTOA8MTQ0 251 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 ALG1L2C9J202 215 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 F8W031 263 aaPredicted RBP5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 H7C1D1 291 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 GLRX3O76003 335 aaKnown RBP5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 DBHP09172 617 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 MSL3P1P0C860 447 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 PDE6AP16499 860 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 KCNA6P17658 529 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 IL2P60568 153 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 FAPQ12884 760 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 RAB3GAP1Q15042 981 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 PCBP1Q15365 356 aaKnown RBP eCLIP5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 RGL3Q3MIN7 710 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 EMC4Q5J8M3 183 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 PKN3Q6P5Z2 889 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 ARHGAP36Q6ZRI8 547 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 OVCH1Q7RTY7 1134 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 CISD2Q8N5K1 135 aaKnown RBP5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 UBR7Q8N806 425 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 BOCQ9BWV1 1114 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 CDIP1Q9H305 208 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 IFT22Q9H7X7 185 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 SP110Q9HB58 689 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 TNFRSF12AQ9NP84 129 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 ZNF652Q9Y2D9 606 aa5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 ARID1BQ8NFD5 2236 aaPredicted RBP5.44□□□□□ -1.54
CALCOCO2-220ENST00000511816 PTPDC1A2A3K4 754 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 NFIBO00712 420 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 F2P00734 622 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 COL6A2P12110 1019 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 YBX3P16989 372 aaKnown RBP eCLIP5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 KRT15P19012 456 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 PMLP29590 882 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 GJA4P35212 333 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 KPNA1P52294 538 aaPredicted RBP5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 AMPD3Q01432 767 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 STRN3Q13033 797 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 TIGD5Q53EQ6 642 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 RNF219Q5W0B1 726 aaPredicted RBP5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 ZC3H14Q6PJT7 736 aaKnown RBP5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 PRR23BQ6ZRT6 265 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 MILR1Q7Z6M3 343 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 OSTM1Q86WC4 334 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 BHLHE22Q8NFJ8 381 aaPredicted RBP5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 UHMK1Q8TAS1 419 aaKnown RBP5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 PIP4K2CQ8TBX8 421 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 SHISA4Q96DD7 197 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 DDX11Q96FC9 970 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 YIPF4Q9BSR8 244 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 MTFR1LQ9H019 292 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 NGRNQ9NPE2 291 aaKnown RBP5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 MYOTQ9UBF9 498 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 CBLCQ9ULV8 474 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 APOBEC2Q9Y235 224 aaKnown RBP5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 PCDHB4Q9Y5E5 795 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 ATP23Q9Y6H3 246 aa5.43□□□□□ -1.54
CALCOCO2-220ENST00000511816 NUDT19A8MXV4 375 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 ULK1O75385 1050 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 TMEM253P0C7T8 217 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 MAPKAPK2P49137 400 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 FIGNQ5HY92 759 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 HABP4Q5JVS0 413 aaKnown RBP5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 ABHD17CQ6PCB6 329 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 HHIPL2Q6UWX4 724 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 KCTD1Q719H9 257 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 OTOP1Q7RTM1 612 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 ZNF605Q86T29 641 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 AFAP1L2Q8N4X5 818 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 WDR66Q8TBY9 1149 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 GPATCH3Q96I76 525 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 CEP89Q96ST8 783 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 PCIF1Q9H4Z3 704 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 HOMER2Q9NSB8 354 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 SRPK3Q9UPE1 567 aa5.42□□□□□ -1.54
CALCOCO2-220ENST00000511816 ZC3H12DA2A288 527 aaKnown RBP5.41□□□□□ -1.54
CALCOCO2-220ENST00000511816 ZNF561-AS1K7EIQ3 104 aa5.41□□□□□ -1.54
CALCOCO2-220ENST00000511816 HRKO00198 91 aa5.41□□□□□ -1.54
CALCOCO2-220ENST00000511816 TRAF5O00463 557 aa5.41□□□□□ -1.54
CALCOCO2-220ENST00000511816 NKRFO15226 690 aaKnown RBP eCLIP5.41□□□□□ -1.54
CALCOCO2-220ENST00000511816 CLASP2O75122 1294 aaKnown RBP5.41□□□□□ -1.54
CALCOCO2-220ENST00000511816 TADA3O75528 432 aa5.41□□□□□ -1.54
CALCOCO2-220ENST00000511816 MECP2P51608 486 aaKnown RBP5.41□□□□□ -1.54
CALCOCO2-220ENST00000511816 JAM2P57087 298 aa5.41□□□□□ -1.54
CALCOCO2-220ENST00000511816 IRF9Q00978 393 aa5.41□□□□□ -1.54
CALCOCO2-220ENST00000511816 KIR3DS1Q14943 382 aa5.41□□□□□ -1.54
CALCOCO2-220ENST00000511816 ZNF648Q5T619 568 aaPredicted RBP5.41□□□□□ -1.54
CALCOCO2-220ENST00000511816 SYDE1Q6ZW31 735 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms