RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 LRCH3Q96II8 777 aa18.45■□□□□ 0.54
PDLIM5-216ENST00000511767 CTAGE1Q96RT6 745 aa18.45■□□□□ 0.54
PDLIM5-216ENST00000511767 HIPK3Q9H422 1215 aa18.45■□□□□ 0.54
PDLIM5-216ENST00000511767 HDAC6Q9UBN7 1215 aa18.45■□□□□ 0.54
PDLIM5-216ENST00000511767 UMODL1Q5DID0 1318 aa18.45■□□□□ 0.54
PDLIM5-216ENST00000511767 H3BRB1 525 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 CPLX1O14810 134 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 EDIL3O43854 480 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 CYP3A4P08684 503 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 ARP10275 920 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 SREBF1P36956 1147 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 NEK4P51957 841 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 MFSD10Q14728 455 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 ANKRD1Q15327 319 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 CEP55Q53EZ4 464 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 MCTP2Q6DN12 878 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 GDF6Q6KF10 455 aaPredicted RBP18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 TRIM22Q8IYM9 498 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 VWCEQ96DN2 955 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 ALG1Q9BT22 464 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 SLKQ9H2G2 1235 aaPredicted RBP18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 TUT1Q9H6E5 874 aaKnown RBP18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 KCNH7Q9NS40 1196 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 VPS54Q9P1Q0 977 aa18.44■□□□□ 0.54
PDLIM5-216ENST00000511767 GSTTP1A0A1W2PQM5 241 aa18.43■□□□□ 0.54
PDLIM5-216ENST00000511767 DEXIO95424 95 aa18.43■□□□□ 0.54
PDLIM5-216ENST00000511767 ZNF286BP0CG31 522 aa18.43■□□□□ 0.54
PDLIM5-216ENST00000511767 ARHGAP4P98171 946 aa18.43■□□□□ 0.54
PDLIM5-216ENST00000511767 PPIGQ13427 754 aaKnown RBP eCLIP18.43■□□□□ 0.54
PDLIM5-216ENST00000511767 MTMR1Q13613 665 aa18.43■□□□□ 0.54
PDLIM5-216ENST00000511767 HIC1Q14526 733 aa18.43■□□□□ 0.54
PDLIM5-216ENST00000511767 PTGISQ16647 500 aa18.43■□□□□ 0.54
PDLIM5-216ENST00000511767 CPLX2Q6PUV4 134 aaKnown RBP18.43■□□□□ 0.54
PDLIM5-216ENST00000511767 KATNAL1Q9BW62 490 aa18.43■□□□□ 0.54
PDLIM5-216ENST00000511767 WNT8AQ9H1J5 351 aa18.43■□□□□ 0.54
PDLIM5-216ENST00000511767 GTF2IRD1Q9UHL9 959 aa18.43■□□□□ 0.54
PDLIM5-216ENST00000511767 LAMA3Q16787 3333 aa18.43■□□□□ 0.54
PDLIM5-216ENST00000511767 SZT2Q5T011 3432 aa18.43■□□□□ 0.54
PDLIM5-216ENST00000511767 NOP56O00567 594 aaKnown RBP18.42■□□□□ 0.54
PDLIM5-216ENST00000511767 CTDNEP1O95476 244 aa18.42■□□□□ 0.54
PDLIM5-216ENST00000511767 LGALS2P05162 132 aa18.42■□□□□ 0.54
PDLIM5-216ENST00000511767 CCL23P55773 120 aa18.42■□□□□ 0.54
PDLIM5-216ENST00000511767 ME3Q16798 604 aa18.42■□□□□ 0.54
PDLIM5-216ENST00000511767 TMEM240Q5SV17 173 aa18.42■□□□□ 0.54
PDLIM5-216ENST00000511767 REXO1Q8N1G1 1221 aaKnown RBP18.42■□□□□ 0.54
PDLIM5-216ENST00000511767 C7orf31Q8N865 590 aa18.42■□□□□ 0.54
PDLIM5-216ENST00000511767 BICD2Q8TD16 824 aa18.42■□□□□ 0.54
PDLIM5-216ENST00000511767 SEPT1Q8WYJ6 367 aa18.42■□□□□ 0.54
PDLIM5-216ENST00000511767 KIF2CQ99661 725 aa18.42■□□□□ 0.54
PDLIM5-216ENST00000511767 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.42■□□□□ 0.54
PDLIM5-216ENST00000511767 IL23AQ9NPF7 189 aa18.42■□□□□ 0.54
PDLIM5-216ENST00000511767 LTBP2Q14767 1821 aa18.42■□□□□ 0.54
PDLIM5-216ENST00000511767 FAM86B1E9PN63 330 aa18.41■□□□□ 0.54
PDLIM5-216ENST00000511767 FAM86B2P0C5J1 330 aa18.41■□□□□ 0.54
PDLIM5-216ENST00000511767 ACRP10323 421 aa18.41■□□□□ 0.54
PDLIM5-216ENST00000511767 ZNF76P36508 570 aa18.41■□□□□ 0.54
PDLIM5-216ENST00000511767 NLRP5P59047 1200 aa18.41■□□□□ 0.54
PDLIM5-216ENST00000511767 ZNF200P98182 395 aaPredicted RBP18.41■□□□□ 0.54
PDLIM5-216ENST00000511767 GPR153Q6NV75 609 aa18.41■□□□□ 0.54
PDLIM5-216ENST00000511767 ZNF365Q70YC5 407 aa18.41■□□□□ 0.54
PDLIM5-216ENST00000511767 NIPA1Q7RTP0 329 aa18.41■□□□□ 0.54
PDLIM5-216ENST00000511767 CCDC148Q8NFR7 591 aa18.41■□□□□ 0.54
PDLIM5-216ENST00000511767 RASGRP4Q8TDF6 673 aa18.41■□□□□ 0.54
PDLIM5-216ENST00000511767 AIFM3Q96NN9 605 aa18.41■□□□□ 0.54
PDLIM5-216ENST00000511767 RNPEPQ9H4A4 650 aa18.41■□□□□ 0.54
PDLIM5-216ENST00000511767 AGO4Q9HCK5 861 aaKnown RBP18.41■□□□□ 0.54
PDLIM5-216ENST00000511767 PKD2L1Q9P0L9 805 aa18.41■□□□□ 0.54
PDLIM5-216ENST00000511767 DTNBO60941 627 aa18.4■□□□□ 0.54
PDLIM5-216ENST00000511767 UTP14CQ5TAP6 766 aaKnown RBP18.4■□□□□ 0.54
PDLIM5-216ENST00000511767 RASIP1Q5U651 963 aa18.4■□□□□ 0.54
PDLIM5-216ENST00000511767 RPUSD2Q8IZ73 545 aaKnown RBP18.4■□□□□ 0.54
PDLIM5-216ENST00000511767 FAM177A1Q8N128 213 aaPredicted RBP18.4■□□□□ 0.54
PDLIM5-216ENST00000511767 NECAB1Q8N987 351 aa18.4■□□□□ 0.54
PDLIM5-216ENST00000511767 SCLYQ96I15 445 aa18.4■□□□□ 0.54
PDLIM5-216ENST00000511767 PCDHA4Q9UN74 947 aa18.4■□□□□ 0.54
PDLIM5-216ENST00000511767 IGLV3-22A0A075B6J6 115 aa18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 M0R2N6 131 aa18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 PITPNM1O00562 1244 aa18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 DHX15O43143 795 aaKnown RBP18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 FGBP02675 491 aa18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 IQCF3P0C7M6 154 aa18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 FDPSP14324 419 aaKnown RBP18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 CIITAP33076 1130 aa18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 USP11P51784 963 aa18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 SP4Q02446 784 aa18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 ITGB3BPQ13352 177 aaPredicted RBP18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 BFSP2Q13515 415 aa18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 NPY5RQ15761 445 aa18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 PLA2G4DQ86XP0 818 aa18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 RETREG2Q8NC44 543 aa18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 DHX38Q92620 1227 aaKnown RBP18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 NOD1Q9Y239 953 aa18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 NFASCO94856 1347 aa18.39■□□□□ 0.53
PDLIM5-216ENST00000511767 CDKL5O76039 1030 aa18.38■□□□□ 0.53
PDLIM5-216ENST00000511767 ATG7O95352 703 aa18.38■□□□□ 0.53
PDLIM5-216ENST00000511767 LARGE1O95461 756 aa18.38■□□□□ 0.53
PDLIM5-216ENST00000511767 HOXC8P31273 242 aa18.38■□□□□ 0.53
PDLIM5-216ENST00000511767 TCF7P36402 384 aaPredicted RBP18.38■□□□□ 0.53
PDLIM5-216ENST00000511767 GPNMBQ14956 572 aa18.38■□□□□ 0.53
PDLIM5-216ENST00000511767 GALNT17Q6IS24 598 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms