RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 CROTQ9UKG9 612 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 NPFFR2Q9Y5X5 522 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 TRBV23-1A0A0A0MS06 115 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 TCRBV5S2A0A599 114 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 PRRG2O14669 202 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 SLC27A2O14975 620 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 MSCO60682 206 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 SOD2P04179 222 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 CELA3BP08861 270 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 COL6A2P12110 1019 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 RPL13P26373 211 aaKnown RBP4.74□□□□□ -1.65
CHD1-207ENST00000511628 THBS2P35442 1172 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 ITGA1P56199 1179 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 SUMO1P63165 101 aaKnown RBP4.74□□□□□ -1.65
CHD1-207ENST00000511628 PLP2Q04941 152 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 GRIN1Q05586 938 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 KIAA2012Q0VF49 1180 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 EMC4Q5J8M3 183 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 YOD1Q5VVQ6 348 aaPredicted RBP4.74□□□□□ -1.65
CHD1-207ENST00000511628 MCTP2Q6DN12 878 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 BORAQ6PGQ7 559 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.74□□□□□ -1.65
CHD1-207ENST00000511628 C20orf173Q96LM9 149 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 ZSWIM3Q96MP5 696 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 DEPDC7Q96QD5 511 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 WRNIP1Q96S55 665 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 BDH2Q9BUT1 245 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 KANSL2Q9H9L4 492 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 SLC6A20Q9NP91 592 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 CATSPERZQ9NTU4 200 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 PPARGC1AQ9UBK2 798 aaKnown RBP4.74□□□□□ -1.65
CHD1-207ENST00000511628 MRPL42Q9Y6G3 142 aaKnown RBP4.74□□□□□ -1.65
CHD1-207ENST00000511628 CADPSQ9ULU8 1353 aa4.74□□□□□ -1.65
CHD1-207ENST00000511628 KDM2BQ8NHM5 1336 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 TLDC2A0PJX2 215 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 DDX3XO00571 662 aaKnown RBP eCLIP4.73□□□□□ -1.65
CHD1-207ENST00000511628 AQP7O14520 342 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 TADA3O75528 432 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 FBXO21O94952 628 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 NAT1P18440 290 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 ST5P78524 1137 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 GUCY1A3Q02108 690 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 RGL3Q3MIN7 710 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 VASNQ6EMK4 673 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 STYK1Q6J9G0 422 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 CYP4F22Q6NT55 531 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 TEPPQ6URK8 271 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 TMC5Q6UXY8 1006 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 OTOP3Q7RTS5 596 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 FERMT3Q86UX7 667 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 LINC00482Q8N8I6 264 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 CXorf38Q8TB03 319 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 ADAMTS17Q8TE56 1095 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 MRFAP1L1Q96HT8 127 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 TMEM209Q96SK2 561 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 SYT3Q9BQG1 590 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 SPATA6Q9NWH7 488 aaPredicted RBP4.73□□□□□ -1.65
CHD1-207ENST00000511628 ASH2LQ9UBL3 628 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 DSEQ9UL01 958 aa4.73□□□□□ -1.65
CHD1-207ENST00000511628 NCANO14594 1321 aa4.72□□□□□ -1.65
CHD1-207ENST00000511628 ZNF536O15090 1300 aa4.72□□□□□ -1.65
CHD1-207ENST00000511628 CNR2P34972 360 aa4.72□□□□□ -1.65
CHD1-207ENST00000511628 PAK1Q13153 545 aa4.72□□□□□ -1.65
CHD1-207ENST00000511628 TUSC3Q13454 348 aa4.72□□□□□ -1.65
CHD1-207ENST00000511628 NFE2L2Q16236 605 aa4.72□□□□□ -1.65
CHD1-207ENST00000511628 NTRK3Q16288 839 aa4.72□□□□□ -1.65
CHD1-207ENST00000511628 CR1LQ2VPA4 569 aa4.72□□□□□ -1.65
CHD1-207ENST00000511628 FAM209AQ5JX71 171 aa4.72□□□□□ -1.65
CHD1-207ENST00000511628 MAMDC2Q7Z304 686 aaPredicted RBP4.72□□□□□ -1.65
CHD1-207ENST00000511628 LILRB2Q8N423 598 aa4.72□□□□□ -1.65
CHD1-207ENST00000511628 ZBTB38Q8NAP3 1195 aaPredicted RBP4.72□□□□□ -1.65
CHD1-207ENST00000511628 PTPRN2Q92932 1015 aa4.72□□□□□ -1.65
CHD1-207ENST00000511628 FTSJ1Q9UET6 329 aa4.72□□□□□ -1.65
CHD1-207ENST00000511628 TRAF6Q9Y4K3 522 aa4.72□□□□□ -1.65
CHD1-207ENST00000511628 MROH6A6NGR9 719 aa4.71□□□□□ -1.66
CHD1-207ENST00000511628 GSTA4O15217 222 aa4.71□□□□□ -1.66
CHD1-207ENST00000511628 DIAPH1O60610 1272 aaKnown RBP4.71□□□□□ -1.66
CHD1-207ENST00000511628 CAPNS1P04632 268 aa4.71□□□□□ -1.66
CHD1-207ENST00000511628 DLX2Q07687 328 aaPredicted RBP4.71□□□□□ -1.66
CHD1-207ENST00000511628 RTP5Q14D33 572 aa4.71□□□□□ -1.66
CHD1-207ENST00000511628 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
CHD1-207ENST00000511628 SDE2Q6IQ49 451 aa4.71□□□□□ -1.66
CHD1-207ENST00000511628 TRMT10BQ6PF06 316 aaKnown RBP4.71□□□□□ -1.66
CHD1-207ENST00000511628 ZNF662Q6ZS27 426 aa4.71□□□□□ -1.66
CHD1-207ENST00000511628 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.71□□□□□ -1.66
CHD1-207ENST00000511628 ZNF761Q86XN6 746 aaPredicted RBP4.71□□□□□ -1.66
CHD1-207ENST00000511628 ZC3H7AQ8IWR0 971 aaKnown RBP4.71□□□□□ -1.66
CHD1-207ENST00000511628 RBM12BQ8IXT5 1001 aaKnown RBP4.71□□□□□ -1.66
CHD1-207ENST00000511628 LGI4Q8N135 537 aa4.71□□□□□ -1.66
CHD1-207ENST00000511628 LCORQ96JN0 433 aaPredicted RBP4.71□□□□□ -1.66
CHD1-207ENST00000511628 RNPC3Q96LT9 517 aaKnown RBP4.71□□□□□ -1.66
CHD1-207ENST00000511628 DNAJC7Q99615 494 aa4.71□□□□□ -1.66
CHD1-207ENST00000511628 TMEM168Q9H0V1 697 aa4.71□□□□□ -1.66
CHD1-207ENST00000511628 IPPKQ9H8X2 491 aa4.71□□□□□ -1.66
CHD1-207ENST00000511628 K7ESM1 405 aa4.7□□□□□ -1.66
CHD1-207ENST00000511628 NOBOXO60393 691 aa4.7□□□□□ -1.66
CHD1-207ENST00000511628 FAM153BP0C7A2 387 aa4.7□□□□□ -1.66
CHD1-207ENST00000511628 SRGAP2CP0DJJ0 459 aa4.7□□□□□ -1.66
CHD1-207ENST00000511628 IL13P35225 146 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms