RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 FAN1Q9Y2M0 1017 aa5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 PNPLA6Q8IY17 1366 aa5.33□□□□□ -1.56
TOPBP1-208ENST00000511439 MSL3P1P0C860 447 aa5.33□□□□□ -1.56
TOPBP1-208ENST00000511439 NCAM1P13591 858 aa5.33□□□□□ -1.56
TOPBP1-208ENST00000511439 EEF1DP3Q658K8 133 aa5.33□□□□□ -1.56
TOPBP1-208ENST00000511439 EEPD1Q7L9B9 569 aa5.33□□□□□ -1.56
TOPBP1-208ENST00000511439 LRP10Q7Z4F1 713 aa5.33□□□□□ -1.56
TOPBP1-208ENST00000511439 PRRT2Q7Z6L0 340 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-208ENST00000511439 ZNF513Q8N8E2 541 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-208ENST00000511439 CCDC113Q9H0I3 377 aa5.33□□□□□ -1.56
TOPBP1-208ENST00000511439 OSBPL2Q9H1P3 480 aa5.33□□□□□ -1.56
TOPBP1-208ENST00000511439 NOL6Q9H6R4 1146 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-208ENST00000511439 WHRNQ9P202 907 aa5.33□□□□□ -1.56
TOPBP1-208ENST00000511439 NCOA2Q15596 1464 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 AATKQ6ZMQ8 1374 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 F8W031 263 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 PDPK1O15530 556 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 SUSD5O60279 629 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 CD3EP07766 207 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 RASA3Q14644 834 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 SKOR2Q2VWA4 1001 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 CCDC144BQ3MJ40 725 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 RCSD1Q6JBY9 416 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 DPH6Q7L8W6 267 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 ADAT2Q7Z6V5 191 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 SYT8Q8NBV8 401 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 LRRC59Q96AG4 307 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 FGD4Q96M96 766 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 APBA2Q99767 749 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 GBP3Q9H0R5 595 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 NUDT5Q9UKK9 219 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 PMF1-BGLAPU3KQ54 211 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 MROH1Q8NDA8 1641 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 CHD4Q14839 1912 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 SAMD9LQ8IVG5 1584 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 SLIT1O75093 1534 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 CAMSAP2Q08AD1 1489 aa5.32□□□□□ -1.56
TOPBP1-208ENST00000511439 PTCH1Q13635 1447 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 MAST1Q9Y2H9 1570 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 TRBV23OR9-2A0A075B6M9 112 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 FFAR3O14843 346 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 PPM1BO75688 479 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 ADRB1P08588 477 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 NAT2P11245 290 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 FBLN1P23142 703 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 LIMS1P48059 325 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 SLURP1P55000 103 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 FOXO4P98177 505 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 RASGRF1Q13972 1273 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 SLC9A5Q14940 896 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 TP53I13Q8NBR0 393 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 ST13P5Q8NFI4 369 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 RCC1LQ96I51 464 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 ZDHHC15Q96MV8 337 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 EPN3Q9H201 632 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 APEX2Q9UBZ4 518 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 CNOT11Q9UKZ1 510 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 EID1Q9Y6B2 187 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 DISP2A7MBM2 1401 aa5.31□□□□□ -1.56
TOPBP1-208ENST00000511439 SPAG9O60271 1321 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 ASXL1Q8IXJ9 1541 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 FAM221BA6H8Z2 402 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 CCDC85CA6NKD9 419 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 IFNGR1P15260 489 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 PRR5P85299 388 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 SPATS1Q496A3 300 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 ZFYVE27Q5T4F4 411 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 BRINP3Q76B58 766 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 ARHGEF39Q8N4T4 335 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 BVESQ8NE79 360 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 FNIP1Q8TF40 1166 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 ALG3Q92685 438 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 TSPAN17Q96FV3 270 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 DEPDC7Q96QD5 511 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 SRPK1Q96SB4 655 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 KRTAP9-8Q9BYQ0 159 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 ZSWIM4Q9H7M6 989 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 USP40Q9NVE5 1235 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 SNTG2Q9NY99 539 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 CDK11AQ9UQ88 783 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 NCOA3Q9Y6Q9 1424 aa5.3□□□□□ -1.56
TOPBP1-208ENST00000511439 GPATCH8Q9UKJ3 1502 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 UBR1Q8IWV7 1749 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 SH3D21A4FU49 640 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 FAM83GA6ND36 823 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 KCNQ2O43526 872 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 ZBTB7AO95365 584 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 GLI4P10075 376 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 ATF3P18847 181 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 TACR1P25103 407 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 SEPHS1P49903 392 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 PLP2Q04941 152 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 PPP2R5DQ14738 602 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 NFE2L2Q16236 605 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 SLC10A6Q3KNW5 377 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 SV2CQ496J9 727 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 LIPIQ6XZB0 460 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 SAPCD2Q86UD0 394 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 LZTR1Q8N653 840 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 NETO2Q8NC67 525 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms