RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 LETM2Q2VYF4 491 aa14.6□□□□□ -0.07
COL6A6-203ENST00000511332 PRR16Q569H4 304 aa14.6□□□□□ -0.07
COL6A6-203ENST00000511332 CYP2W1Q8TAV3 490 aa14.6□□□□□ -0.07
COL6A6-203ENST00000511332 AFG1LQ8WV93 481 aa14.6□□□□□ -0.07
COL6A6-203ENST00000511332 GLT1D1Q96MS3 346 aa14.6□□□□□ -0.07
COL6A6-203ENST00000511332 SENP6Q9GZR1 1112 aaPredicted RBP14.6□□□□□ -0.07
COL6A6-203ENST00000511332 AGO4Q9HCK5 861 aaKnown RBP14.6□□□□□ -0.07
COL6A6-203ENST00000511332 JPH1Q9HDC5 661 aaPredicted RBP14.6□□□□□ -0.07
COL6A6-203ENST00000511332 TCEAL9Q9UHQ7 104 aa14.6□□□□□ -0.07
COL6A6-203ENST00000511332 CYP3A7-CYP3A51PA0A087WV96 503 aa14.59□□□□□ -0.07
COL6A6-203ENST00000511332 IPO5O00410 1097 aaKnown RBP14.59□□□□□ -0.07
COL6A6-203ENST00000511332 CYP3A7P24462 503 aa14.59□□□□□ -0.07
COL6A6-203ENST00000511332 IRX5P78411 483 aaPredicted RBP14.59□□□□□ -0.07
COL6A6-203ENST00000511332 PURAQ00577 322 aaKnown RBP14.59□□□□□ -0.07
COL6A6-203ENST00000511332 Q4G0T1 1027 aa14.59□□□□□ -0.07
COL6A6-203ENST00000511332 LARP1BQ659C4 914 aaKnown RBP14.59□□□□□ -0.07
COL6A6-203ENST00000511332 CYFIP1Q7L576 1253 aa14.59□□□□□ -0.07
COL6A6-203ENST00000511332 NOSTRINQ8IVI9 506 aa14.59□□□□□ -0.07
COL6A6-203ENST00000511332 ZNF577Q9BSK1 485 aa14.59□□□□□ -0.07
COL6A6-203ENST00000511332 STARD7Q9NQZ5 370 aa14.59□□□□□ -0.07
COL6A6-203ENST00000511332 PKD2L1Q9P0L9 805 aa14.59□□□□□ -0.07
COL6A6-203ENST00000511332 DDX25Q9UHL0 483 aaKnown RBP14.59□□□□□ -0.07
COL6A6-203ENST00000511332 ELP1O95163 1332 aa14.59□□□□□ -0.07
COL6A6-203ENST00000511332 KAT6AQ92794 2004 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 CCNT1O60563 726 aaKnown RBP14.58□□□□□ -0.08
COL6A6-203ENST00000511332 ATP9AO75110 1047 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 TDP2O95551 362 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 MYL3P08590 195 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 ARP10275 920 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 HOXD8P13378 290 aaPredicted RBP14.58□□□□□ -0.08
COL6A6-203ENST00000511332 U2AF2P26368 475 aaKnown RBP eCLIP14.58□□□□□ -0.08
COL6A6-203ENST00000511332 BECN1Q14457 450 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 HSDL1Q3SXM5 330 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 EARS2Q5JPH6 523 aaKnown RBP14.58□□□□□ -0.08
COL6A6-203ENST00000511332 PPP4R3AQ6IN85 833 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 CXCL17Q6UXB2 119 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 FERMT2Q96AC1 680 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 LENG9Q96B70 501 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 MBOAT7Q96N66 472 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 MTG1Q9BT17 334 aaPredicted RBP14.58□□□□□ -0.08
COL6A6-203ENST00000511332 KATNAL1Q9BW62 490 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 SEZ6LQ9BYH1 1024 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 TBC1D22BQ9NU19 505 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 SLC9A2Q9UBY0 812 aa14.58□□□□□ -0.08
COL6A6-203ENST00000511332 NOL7Q9UMY1 257 aaKnown RBP14.58□□□□□ -0.08
COL6A6-203ENST00000511332 A0A0U1RQG5 324 aaPredicted RBP14.57□□□□□ -0.08
COL6A6-203ENST00000511332 FAM205CA6NFA0 338 aa14.57□□□□□ -0.08
COL6A6-203ENST00000511332 SORBS3O60504 671 aa14.57□□□□□ -0.08
COL6A6-203ENST00000511332 ITGB3BPQ13352 177 aaPredicted RBP14.57□□□□□ -0.08
COL6A6-203ENST00000511332 SNX17Q15036 470 aa14.57□□□□□ -0.08
COL6A6-203ENST00000511332 MCTP1Q6DN14 999 aa14.57□□□□□ -0.08
COL6A6-203ENST00000511332 GPR20Q99678 358 aa14.57□□□□□ -0.08
COL6A6-203ENST00000511332 MROH7Q68CQ1 1323 aa14.57□□□□□ -0.08
COL6A6-203ENST00000511332 VPS37CA5D8V6 355 aaPredicted RBP14.56□□□□□ -0.08
COL6A6-203ENST00000511332 MSH4O15457 936 aa14.56□□□□□ -0.08
COL6A6-203ENST00000511332 EDIL3O43854 480 aa14.56□□□□□ -0.08
COL6A6-203ENST00000511332 PPFIA4O75335 1185 aa14.56□□□□□ -0.08
COL6A6-203ENST00000511332 ZNF286BP0CG31 522 aa14.56□□□□□ -0.08
COL6A6-203ENST00000511332 TRAPPC10P48553 1259 aa14.56□□□□□ -0.08
COL6A6-203ENST00000511332 KRT76Q01546 638 aa14.56□□□□□ -0.08
COL6A6-203ENST00000511332 SP4Q02446 784 aa14.56□□□□□ -0.08
COL6A6-203ENST00000511332 MLLT1Q03111 559 aaPredicted RBP14.56□□□□□ -0.08
COL6A6-203ENST00000511332 ORC2Q13416 577 aaPredicted RBP14.56□□□□□ -0.08
COL6A6-203ENST00000511332 C1orf53Q5VUE5 145 aa14.56□□□□□ -0.08
COL6A6-203ENST00000511332 VTI1AQ96AJ9 217 aa14.56□□□□□ -0.08
COL6A6-203ENST00000511332 RIT2Q99578 217 aa14.56□□□□□ -0.08
COL6A6-203ENST00000511332 FOXD4L1Q9NU39 408 aa14.56□□□□□ -0.08
COL6A6-203ENST00000511332 ZNF215Q9UL58 517 aaPredicted RBP14.56□□□□□ -0.08
COL6A6-203ENST00000511332 MKI67P46013 3256 aaKnown RBP14.56□□□□□ -0.08
COL6A6-203ENST00000511332 LTBP2Q14767 1821 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 KIF28PB7ZC32 967 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 TBX3O15119 743 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 SLC37A4O43826 429 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 NEMFO60524 1076 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 GAS7O60861 476 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 F2P00734 622 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 LGALS2P05162 132 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 PDIA4P13667 645 aaKnown RBP14.55□□□□□ -0.08
COL6A6-203ENST00000511332 TCF7P36402 384 aaPredicted RBP14.55□□□□□ -0.08
COL6A6-203ENST00000511332 ATN1P54259 1190 aaPredicted RBP14.55□□□□□ -0.08
COL6A6-203ENST00000511332 LRCH2Q5VUJ6 765 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 ZNF746Q6NUN9 644 aaPredicted RBP14.55□□□□□ -0.08
COL6A6-203ENST00000511332 SLC39A5Q6ZMH5 540 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 SMAP1Q8IYB5 467 aaPredicted RBP14.55□□□□□ -0.08
COL6A6-203ENST00000511332 ETNPPLQ8TBG4 499 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 SLC5A5Q92911 643 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 FAM20AQ96MK3 541 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 TEKT3Q9BXF9 490 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 BCAS3Q9H6U6 928 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 EMSYQ7Z589 1322 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 TANC1Q9C0D5 1861 aa14.55□□□□□ -0.08
COL6A6-203ENST00000511332 DDX39AO00148 427 aaKnown RBP14.54□□□□□ -0.08
COL6A6-203ENST00000511332 RTP1P59025 263 aa14.54□□□□□ -0.08
COL6A6-203ENST00000511332 ACTR2P61160 394 aa14.54□□□□□ -0.08
COL6A6-203ENST00000511332 ITGA7Q13683 1181 aa14.54□□□□□ -0.08
COL6A6-203ENST00000511332 LRRC26Q2I0M4 334 aa14.54□□□□□ -0.08
COL6A6-203ENST00000511332 TTC38Q5R3I4 469 aa14.54□□□□□ -0.08
COL6A6-203ENST00000511332 BRAPQ7Z569 592 aa14.54□□□□□ -0.08
COL6A6-203ENST00000511332 SLFN12Q8IYM2 578 aa14.54□□□□□ -0.08
COL6A6-203ENST00000511332 SEPT1Q8WYJ6 367 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms