RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 TPD52L2O43399 206 aaKnown RBP7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 PPP1R11O60927 126 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 CLASP2O75122 1294 aaKnown RBP7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 LSP1P33241 339 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 UBE4AQ14139 1066 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 MLC1Q15049 377 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 MROH9Q5TGP6 573 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 CYP4F22Q6NT55 531 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 ARHGAP36Q6ZRI8 547 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 C14orf80Q86SX3 495 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 CPA6Q8N4T0 437 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 UHMK1Q8TAS1 419 aaKnown RBP7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 SH3RF2Q8TEC5 729 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 FBXO41Q8TF61 875 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 MISP3Q96FF7 219 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 HHIPL1Q96JK4 782 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 CHAMP1Q96JM3 812 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 HRASLS5Q96KN8 279 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 ORAI2Q96SN7 254 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 NUP88Q99567 741 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 KCNJ15Q99712 375 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 ARNT2Q9HBZ2 717 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 LRRC4CQ9HCJ2 640 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 SLC6A20Q9NP91 592 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 ZC3H7BQ9UGR2 993 aaKnown RBP7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 SRPK3Q9UPE1 567 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 B3GALT1Q9Y5Z6 326 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 FAM181BA6NEQ2 426 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 MAN2B1O00754 1011 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 MYBL2P10244 700 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 FPR2P25090 351 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 ZNF174Q15697 407 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 GFOD2Q3B7J2 385 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 MAP9Q49MG5 647 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 EMC4Q5J8M3 183 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 ANGEL2Q5VTE6 544 aaKnown RBP7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 CC2D1AQ6P1N0 951 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 NLGN4XQ8N0W4 816 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 KIAA1958Q8N8K9 716 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 LMBR1Q8WVP7 490 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 ASIC4Q96FT7 647 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 TRMT2BQ96GJ1 504 aaKnown RBP7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 SLC39A13Q96H72 371 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 FAXDC2Q96IV6 333 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 ELF4Q99607 663 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 ZDHHC5Q9C0B5 715 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 ZNF700Q9H0M5 742 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 ACSS2Q9NR19 701 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 C14orf119Q9NWQ9 140 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 ANKRD6Q9Y2G4 727 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 GIT1Q9Y2X7 761 aa7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 LUC7L2Q9Y383 392 aaKnown RBP7.18□□□□□ -1.26
HMGB1P47-201ENST00000511281 C22orf46C9J442 243 aa7.17□□□□□ -1.26
HMGB1P47-201ENST00000511281 PRPF3O43395 683 aaKnown RBP7.17□□□□□ -1.26
HMGB1P47-201ENST00000511281 DGKIO75912 1065 aa7.17□□□□□ -1.26
HMGB1P47-201ENST00000511281 SNUPNO95149 360 aaKnown RBP7.17□□□□□ -1.26
HMGB1P47-201ENST00000511281 CYP17A1P05093 508 aa7.17□□□□□ -1.26
HMGB1P47-201ENST00000511281 EPHA5P54756 1037 aa7.17□□□□□ -1.26
HMGB1P47-201ENST00000511281 RHBDL3P58872 404 aa7.17□□□□□ -1.26
HMGB1P47-201ENST00000511281 DUSP4Q13115 394 aa7.17□□□□□ -1.26
HMGB1P47-201ENST00000511281 FSTL4Q6MZW2 842 aa7.17□□□□□ -1.26
HMGB1P47-201ENST00000511281 ZZZ3Q8IYH5 903 aa7.17□□□□□ -1.26
HMGB1P47-201ENST00000511281 JMJD8Q96S16 334 aa7.17□□□□□ -1.26
HMGB1P47-201ENST00000511281 ZMAT4Q9H898 229 aa7.17□□□□□ -1.26
HMGB1P47-201ENST00000511281 MARCH2Q9P0N8 246 aa7.17□□□□□ -1.26
HMGB1P47-201ENST00000511281 GULP1Q9UBP9 304 aa7.17□□□□□ -1.26
HMGB1P47-201ENST00000511281 COA3Q9Y2R0 106 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P47-201ENST00000511281 NKRFO15226 690 aaKnown RBP eCLIP7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 PEX14O75381 377 aa7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 KRT18P05783 430 aaKnown RBP7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 VCAM1P19320 739 aa7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 SDHAP31040 664 aa7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 SLC6A11P48066 632 aa7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 FNTBP49356 437 aa7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 PCBP2Q15366 365 aaKnown RBP eCLIP7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 DGKHQ86XP1 1220 aa7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 PTRH1Q86Y79 214 aaKnown RBP7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 TEX2Q8IWB9 1127 aa7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 CMTR2Q8IYT2 770 aaKnown RBP7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 SSH1Q8WYL5 1049 aa7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 PMM1Q92871 262 aa7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 AIFM3Q96NN9 605 aa7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 POLR3GLQ9BT43 218 aa7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 TOPORSQ9NS56 1045 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 IP6K2Q9UHH9 426 aa7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 NUB1Q9Y5A7 615 aa7.16□□□□□ -1.26
HMGB1P47-201ENST00000511281 HIP1RO75146 1068 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 MT-CO1P00395 513 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 ITGB2P05107 769 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 MYL1P05976 194 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 ZGLP1P0C6A0 271 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 SLC9A1P19634 815 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 GJA4P35212 333 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 GPR3P46089 330 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 MOGSQ13724 837 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 GTF2H3Q13889 308 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 MSMPQ1L6U9 139 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 CERS3Q8IU89 383 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 LZTR1Q8N653 840 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms