RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 DNAI2Q9GZS0 605 aa10.79□□□□□ -0.68
USP53-207ENST00000510852 TAOK3Q9H2K8 898 aa10.79□□□□□ -0.68
USP53-207ENST00000510852 hCG_1642624A0A1W2PR95 340 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 RNF113AO15541 343 aaKnown RBP10.78□□□□□ -0.68
USP53-207ENST00000510852 PMLP29590 882 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 NMIQ13287 307 aaPredicted RBP10.78□□□□□ -0.68
USP53-207ENST00000510852 CCDC178Q5BJE1 867 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 NXNQ6DKJ4 435 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 SPOCD1Q6ZMY3 1216 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 SLAIN1Q8ND83 568 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 FAM227BQ96M60 508 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 ESYT1Q9BSJ8 1104 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 KATNAL1Q9BW62 490 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 CYP4F11Q9HBI6 524 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 LRP2BPQ9P2M1 347 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 F8W031 263 aaPredicted RBP10.78□□□□□ -0.68
USP53-207ENST00000510852 ECE2O60344 883 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 PLOD3O60568 738 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 KLHL41O60662 606 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 MBD4O95243 580 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 SOX11P35716 441 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 MAP3K12Q12852 859 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 LRRFIP1Q32MZ4 808 aaKnown RBP10.78□□□□□ -0.68
USP53-207ENST00000510852 GFOD2Q3B7J2 385 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 IGF2-ASQ6U949 168 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 CEP68Q76N32 757 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 FAM26EQ8N5C1 309 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 EPS8L1Q8TE68 723 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 NEK1Q96PY6 1258 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 NCOA5Q9HCD5 579 aaKnown RBP10.78□□□□□ -0.68
USP53-207ENST00000510852 SUFUQ9UMX1 484 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 SLC30A1Q9Y6M5 507 aa10.78□□□□□ -0.68
USP53-207ENST00000510852 A0A0D9SFI3 127 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 TMEM127O75204 238 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 ZFYP08048 801 aaPredicted RBP10.77□□□□□ -0.68
USP53-207ENST00000510852 IARSP41252 1262 aaKnown RBP10.77□□□□□ -0.68
USP53-207ENST00000510852 GTF2IP78347 998 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 NFKB2Q00653 900 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 MOGSQ13724 837 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 ELF2Q15723 593 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 SLC9C2Q5TAH2 1124 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 ZSCAN25Q6NSZ9 544 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 XRRA1Q6P2D8 792 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 TBC1D1Q86TI0 1168 aaPredicted RBP10.77□□□□□ -0.68
USP53-207ENST00000510852 EFCAB3Q8N7B9 438 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 NAT8LQ8N9F0 302 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 HOOK2Q96ED9 719 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 SLC13A1Q9BZW2 595 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 IL25Q9H293 177 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 BRMS1Q9HCU9 246 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 FAM50BQ9Y247 325 aa10.77□□□□□ -0.68
USP53-207ENST00000510852 FAM205AQ6ZU69 1335 aa10.77□□□□□ -0.69
USP53-207ENST00000510852 SALL1Q9NSC2 1324 aa10.77□□□□□ -0.69
USP53-207ENST00000510852 AKR1B15C9JRZ8 316 aaPredicted RBP10.77□□□□□ -0.69
USP53-207ENST00000510852 SGSM2O43147 1006 aa10.77□□□□□ -0.69
USP53-207ENST00000510852 SSBP05455 408 aaKnown RBP eCLIP10.77□□□□□ -0.69
USP53-207ENST00000510852 PDE6AP16499 860 aa10.77□□□□□ -0.69
USP53-207ENST00000510852 CD86P42081 329 aa10.77□□□□□ -0.69
USP53-207ENST00000510852 ECE1P42892 770 aa10.77□□□□□ -0.69
USP53-207ENST00000510852 GTF2A1P52655 376 aaPredicted RBP10.77□□□□□ -0.69
USP53-207ENST00000510852 CAPN12Q6ZSI9 719 aa10.77□□□□□ -0.69
USP53-207ENST00000510852 TOGARAM2Q6ZUX3 1019 aa10.77□□□□□ -0.69
USP53-207ENST00000510852 ZGPATQ8N5A5 531 aaKnown RBP10.77□□□□□ -0.69
USP53-207ENST00000510852 RUFY2Q8WXA3 655 aa10.77□□□□□ -0.69
USP53-207ENST00000510852 MAML1Q92585 1016 aa10.77□□□□□ -0.69
USP53-207ENST00000510852 ARHGEF2Q92974 986 aaKnown RBP10.77□□□□□ -0.69
USP53-207ENST00000510852 KCNQ5Q9NR82 932 aa10.77□□□□□ -0.69
USP53-207ENST00000510852 CHMP5Q9NZZ3 219 aa10.77□□□□□ -0.69
USP53-207ENST00000510852 C9IYK1 514 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 TNNT1P13805 278 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 HOXD12P35452 270 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 STAT3P40763 770 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 SCNN1DP51172 638 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 CACNB2Q08289 660 aaPredicted RBP10.76□□□□□ -0.69
USP53-207ENST00000510852 WDR44Q5JSH3 913 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 ZMYM1Q5SVZ6 1142 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 BEND5Q7L4P6 421 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 SLC44A2Q8IWA5 706 aaPredicted RBP10.76□□□□□ -0.69
USP53-207ENST00000510852 SIX5Q8N196 739 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 TSGA13Q96PP4 275 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 SEC62Q99442 399 aaKnown RBP10.76□□□□□ -0.69
USP53-207ENST00000510852 MAK16Q9BXY0 300 aaKnown RBP10.76□□□□□ -0.69
USP53-207ENST00000510852 KIAA1586Q9HCI6 787 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 BARX2Q9UMQ3 279 aaPredicted RBP10.76□□□□□ -0.69
USP53-207ENST00000510852 LTBP3Q9NS15 1303 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 AK9Q5TCS8 1911 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 TCRBV5S4A2TA0A5A2 114 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 YDJCA8MPS7 323 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 CYP1A2P05177 515 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 PARP1P09874 1014 aaKnown RBP10.76□□□□□ -0.69
USP53-207ENST00000510852 PRDX5P30044 214 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 PAPOLAP51003 745 aaKnown RBP10.76□□□□□ -0.69
USP53-207ENST00000510852 CSE1LP55060 971 aaKnown RBP10.76□□□□□ -0.69
USP53-207ENST00000510852 UBE3CQ15386 1083 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 OCLNQ16625 522 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 MFSD14BQ5SR56 506 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 CCDC144CPQ8IYA2 1237 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 ZNF579Q8NAF0 562 aaKnown RBP10.76□□□□□ -0.69
USP53-207ENST00000510852 TBC1D22AQ8WUA7 517 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 NUP133Q8WUM0 1156 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms