RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	CDCA3	Q99618	268 aa	Predicted RBP	12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	TLE6	Q9H808	572 aa		12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	NOP58	Q9Y2X3	529 aa	Known RBP	12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676		R4GN57	208 aa		12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	MYH4	Q9Y623	1939 aa		12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	HELZ2	Q9BYK8	2649 aa	Known RBP	12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	FANCM	Q8IYD8	2048 aa		12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	NFIB	O00712	420 aa		12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	GH1	P01241	217 aa		12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	BTG3	Q14201	252 aa	Predicted RBP	12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	DUSP6	Q16828	381 aa		12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	SYCE2	Q6PIF2	218 aa		12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	SUMF1	Q8NBK3	374 aa		12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	DNER	Q8NFT8	737 aa		12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	POF1B	Q8WVV4	589 aa		12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	DDRGK1	Q96HY6	314 aa		12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	MPHOSPH6	Q99547	160 aa	Known RBP	12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	HINFP	Q9BQA5	517 aa		12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	ARPP21	Q9UBL0	812 aa	Predicted RBP	12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	CCPG1	Q9ULG6	757 aa		12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	CNOT1	A5YKK6	2376 aa	Known RBP	12.78	□□□□□ -0.36
PTCD2-208	ENST00000510676	ITPR1	Q14643	2758 aa		12.77	□□□□□ -0.36
PTCD2-208	ENST00000510676	IGF2R	P11717	2491 aa		12.77	□□□□□ -0.37
PTCD2-208	ENST00000510676	C2CD4D	B7Z1M9	353 aa		12.77	□□□□□ -0.37
PTCD2-208	ENST00000510676	OS9	Q13438	667 aa	Predicted RBP	12.77	□□□□□ -0.37
PTCD2-208	ENST00000510676	SBK1	Q52WX2	424 aa		12.77	□□□□□ -0.37
PTCD2-208	ENST00000510676	ANKRD54	Q6NXT1	300 aa		12.77	□□□□□ -0.37
PTCD2-208	ENST00000510676	ZC3H14	Q6PJT7	736 aa	Known RBP	12.77	□□□□□ -0.37
PTCD2-208	ENST00000510676	SLC30A10	Q6XR72	485 aa		12.77	□□□□□ -0.37
PTCD2-208	ENST00000510676	KLHL23	Q8NBE8	558 aa		12.77	□□□□□ -0.37
PTCD2-208	ENST00000510676	FLCN	Q8NFG4	579 aa		12.77	□□□□□ -0.37
PTCD2-208	ENST00000510676	RASGRP4	Q8TDF6	673 aa		12.77	□□□□□ -0.37
PTCD2-208	ENST00000510676	SH2B1	Q9NRF2	756 aa	Predicted RBP	12.77	□□□□□ -0.37
PTCD2-208	ENST00000510676	PRR12	Q9ULL5	1215 aa		12.77	□□□□□ -0.37
PTCD2-208	ENST00000510676	PLIN4	Q96Q06	1357 aa		12.77	□□□□□ -0.37
PTCD2-208	ENST00000510676	TTC3	P53804	2025 aa		12.76	□□□□□ -0.37
PTCD2-208	ENST00000510676	DGKI	O75912	1065 aa		12.76	□□□□□ -0.37
PTCD2-208	ENST00000510676	HOXB8	P17481	243 aa	Predicted RBP	12.76	□□□□□ -0.37
PTCD2-208	ENST00000510676	ZDHHC14	Q8IZN3	488 aa		12.76	□□□□□ -0.37
PTCD2-208	ENST00000510676	CRIPAK	Q8N1N5	446 aa		12.76	□□□□□ -0.37
PTCD2-208	ENST00000510676	GPR161	Q8N6U8	529 aa	Known RBP	12.76	□□□□□ -0.37
PTCD2-208	ENST00000510676	RTKN	Q9BST9	563 aa		12.76	□□□□□ -0.37
PTCD2-208	ENST00000510676	ALG1	Q9BT22	464 aa		12.76	□□□□□ -0.37
PTCD2-208	ENST00000510676	MKNK2	Q9HBH9	465 aa		12.76	□□□□□ -0.37
PTCD2-208	ENST00000510676	MRPL42	Q9Y6G3	142 aa	Known RBP	12.76	□□□□□ -0.37
PTCD2-208	ENST00000510676	PRR5-ARHGAP8	B1AHC4	643 aa		12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	PER2	O15055	1255 aa		12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	SURF6	O75683	361 aa	Known RBP	12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	SP100	P23497	879 aa	Predicted RBP	12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	ADD2	P35612	726 aa		12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	SLC1A4	P43007	532 aa		12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	SNAP25	P60880	206 aa		12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	ARHGAP8	P85298	464 aa		12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	UBE3A	Q05086	875 aa		12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	LY6K	Q17RY6	165 aa		12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	CMTR2	Q8IYT2	770 aa	Known RBP	12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	PPTC7	Q8NI37	304 aa		12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	CLEC4D	Q8WXI8	215 aa		12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	ARHGAP45	Q92619	1136 aa		12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	CHAMP1	Q96JM3	812 aa		12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	NECTIN4	Q96NY8	510 aa		12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	RANBP17	Q9H2T7	1088 aa	Known RBP	12.75	□□□□□ -0.37
PTCD2-208	ENST00000510676	WDFY3	Q8IZQ1	3526 aa		12.74	□□□□□ -0.37
PTCD2-208	ENST00000510676	PTPDC1	A2A3K4	754 aa		12.74	□□□□□ -0.37
PTCD2-208	ENST00000510676		B4DLN1	442 aa		12.74	□□□□□ -0.37
PTCD2-208	ENST00000510676	ASGR2	P07307	311 aa		12.74	□□□□□ -0.37
PTCD2-208	ENST00000510676	ZNF286B	P0CG31	522 aa		12.74	□□□□□ -0.37
PTCD2-208	ENST00000510676	SRGAP2B	P0DMP2	458 aa		12.74	□□□□□ -0.37
PTCD2-208	ENST00000510676	MRPL12	P52815	198 aa	Known RBP	12.74	□□□□□ -0.37
PTCD2-208	ENST00000510676	RPS6	P62753	249 aa	Known RBP	12.74	□□□□□ -0.37
PTCD2-208	ENST00000510676	IK	Q13123	557 aa	Predicted RBP	12.74	□□□□□ -0.37
PTCD2-208	ENST00000510676	FAM26D	Q5JW98	314 aa		12.74	□□□□□ -0.37
PTCD2-208	ENST00000510676	RCSD1	Q6JBY9	416 aa		12.74	□□□□□ -0.37
PTCD2-208	ENST00000510676	DHX37	Q8IY37	1157 aa	Known RBP	12.74	□□□□□ -0.37
PTCD2-208	ENST00000510676	TSHZ2	Q9NRE2	1034 aa		12.74	□□□□□ -0.37
PTCD2-208	ENST00000510676	SLC4A4	Q9Y6R1	1079 aa		12.74	□□□□□ -0.37
PTCD2-208	ENST00000510676	NAV2	Q8IVL1	2488 aa		12.73	□□□□□ -0.37
PTCD2-208	ENST00000510676	GOLIM4	O00461	696 aa		12.73	□□□□□ -0.37
PTCD2-208	ENST00000510676	ENPP3	O14638	875 aa		12.73	□□□□□ -0.37
PTCD2-208	ENST00000510676	MCC	P23508	829 aa		12.73	□□□□□ -0.37
PTCD2-208	ENST00000510676	CALML3	P27482	149 aa		12.73	□□□□□ -0.37
PTCD2-208	ENST00000510676	LMNB2	Q03252	620 aa		12.73	□□□□□ -0.37
PTCD2-208	ENST00000510676	SLFNL1	Q499Z3	407 aa		12.73	□□□□□ -0.37
PTCD2-208	ENST00000510676	PDE12	Q6L8Q7	609 aa	Known RBP	12.73	□□□□□ -0.37
PTCD2-208	ENST00000510676	RNF207	Q6ZRF8	634 aa		12.73	□□□□□ -0.37
PTCD2-208	ENST00000510676	BORCS6	Q96GS4	357 aa		12.73	□□□□□ -0.37
PTCD2-208	ENST00000510676	POMK	Q9H5K3	350 aa		12.73	□□□□□ -0.37
PTCD2-208	ENST00000510676	ERVK-5	Q9HDB9	667 aa		12.73	□□□□□ -0.37
PTCD2-208	ENST00000510676	DDX41	Q9UJV9	622 aa	Known RBP	12.73	□□□□□ -0.37
PTCD2-208	ENST00000510676	CDV3	Q9UKY7	258 aa	Known RBP	12.73	□□□□□ -0.37
PTCD2-208	ENST00000510676	DCDC2B	A2VCK2	349 aa		12.72	□□□□□ -0.37
PTCD2-208	ENST00000510676	FSCN2	O14926	492 aa		12.72	□□□□□ -0.37
PTCD2-208	ENST00000510676	PPFIA4	O75335	1185 aa		12.72	□□□□□ -0.37
PTCD2-208	ENST00000510676	GABBR2	O75899	941 aa		12.72	□□□□□ -0.37
PTCD2-208	ENST00000510676	CTSH	P09668	335 aa		12.72	□□□□□ -0.37
PTCD2-208	ENST00000510676	TEC	P42680	631 aa		12.72	□□□□□ -0.37
PTCD2-208	ENST00000510676	ATP8B2	P98198	1209 aa		12.72	□□□□□ -0.37
PTCD2-208	ENST00000510676	LAMC2	Q13753	1193 aa		12.72	□□□□□ -0.37
PTCD2-208	ENST00000510676	GIMAP6	Q6P9H5	292 aa		12.72	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms