RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 PDLIM7Q9NR12 457 aa19.66■□□□□ 0.74
CLDND1-221ENST00000510541 TMEM260Q9NX78 707 aa19.66■□□□□ 0.74
CLDND1-221ENST00000510541 TBX21Q9UL17 535 aa19.66■□□□□ 0.74
CLDND1-221ENST00000510541 EDIL3O43854 480 aa19.65■□□□□ 0.74
CLDND1-221ENST00000510541 ATG7O95352 703 aa19.65■□□□□ 0.74
CLDND1-221ENST00000510541 MYCNP04198 464 aaPredicted RBP19.65■□□□□ 0.74
CLDND1-221ENST00000510541 GCFC2P16383 781 aaKnown RBP19.65■□□□□ 0.74
CLDND1-221ENST00000510541 HOXC8P31273 242 aa19.65■□□□□ 0.74
CLDND1-221ENST00000510541 AIFM3Q96NN9 605 aa19.65■□□□□ 0.74
CLDND1-221ENST00000510541 C16orf70Q9BSU1 422 aa19.65■□□□□ 0.74
CLDND1-221ENST00000510541 AGO4Q9HCK5 861 aaKnown RBP19.65■□□□□ 0.74
CLDND1-221ENST00000510541 TBC1D22BQ9NU19 505 aa19.65■□□□□ 0.74
CLDND1-221ENST00000510541 FAM86B1E9PN63 330 aa19.64■□□□□ 0.73
CLDND1-221ENST00000510541 ATP9AO75110 1047 aa19.64■□□□□ 0.73
CLDND1-221ENST00000510541 MMP1P03956 469 aa19.64■□□□□ 0.73
CLDND1-221ENST00000510541 FAM86B2P0C5J1 330 aa19.64■□□□□ 0.73
CLDND1-221ENST00000510541 NONOQ15233 471 aaKnown RBP eCLIP19.64■□□□□ 0.73
CLDND1-221ENST00000510541 Q4G0T1 1027 aa19.64■□□□□ 0.73
CLDND1-221ENST00000510541 PPP4R3AQ6IN85 833 aa19.64■□□□□ 0.73
CLDND1-221ENST00000510541 CYFIP1Q7L576 1253 aa19.64■□□□□ 0.73
CLDND1-221ENST00000510541 C7orf61Q8IZ16 206 aa19.64■□□□□ 0.73
CLDND1-221ENST00000510541 SEPT1Q8WYJ6 367 aa19.64■□□□□ 0.73
CLDND1-221ENST00000510541 TNFRSF25Q93038 417 aa19.64■□□□□ 0.73
CLDND1-221ENST00000510541 LENG9Q96B70 501 aa19.64■□□□□ 0.73
CLDND1-221ENST00000510541 BRMS1Q9HCU9 246 aa19.64■□□□□ 0.73
CLDND1-221ENST00000510541 ATP11BQ9Y2G3 1177 aa19.64■□□□□ 0.73
CLDND1-221ENST00000510541 KIF3AQ9Y496 699 aa19.64■□□□□ 0.73
CLDND1-221ENST00000510541 EMSYQ7Z589 1322 aa19.63■□□□□ 0.73
CLDND1-221ENST00000510541 NOP56O00567 594 aaKnown RBP19.63■□□□□ 0.73
CLDND1-221ENST00000510541 ADAMTS3O15072 1205 aa19.63■□□□□ 0.73
CLDND1-221ENST00000510541 MYL3P08590 195 aa19.63■□□□□ 0.73
CLDND1-221ENST00000510541 PTGS1P23219 599 aa19.63■□□□□ 0.73
CLDND1-221ENST00000510541 SLC26A2P50443 739 aa19.63■□□□□ 0.73
CLDND1-221ENST00000510541 RBL2Q08999 1139 aa19.63■□□□□ 0.73
CLDND1-221ENST00000510541 CYP2W1Q8TAV3 490 aa19.63■□□□□ 0.73
CLDND1-221ENST00000510541 VTI1AQ96AJ9 217 aa19.63■□□□□ 0.73
CLDND1-221ENST00000510541 RIT2Q99578 217 aa19.63■□□□□ 0.73
CLDND1-221ENST00000510541 JPH1Q9HDC5 661 aaPredicted RBP19.63■□□□□ 0.73
CLDND1-221ENST00000510541 PRKAG2Q9UGJ0 569 aa19.63■□□□□ 0.73
CLDND1-221ENST00000510541 IGKV6D-21A0A0A0MT36 114 aa19.62■□□□□ 0.73
CLDND1-221ENST00000510541 H3BRB1 525 aa19.62■□□□□ 0.73
CLDND1-221ENST00000510541 TBX3O15119 743 aa19.62■□□□□ 0.73
CLDND1-221ENST00000510541 DHX15O43143 795 aaKnown RBP19.62■□□□□ 0.73
CLDND1-221ENST00000510541 LGR5O75473 907 aa19.62■□□□□ 0.73
CLDND1-221ENST00000510541 ZNF76P36508 570 aa19.62■□□□□ 0.73
CLDND1-221ENST00000510541 NBPF20Q3BBV1 942 aa19.62■□□□□ 0.73
CLDND1-221ENST00000510541 PLA2G4DQ86XP0 818 aa19.62■□□□□ 0.73
CLDND1-221ENST00000510541 CCDC83Q8IWF9 413 aa19.62■□□□□ 0.73
CLDND1-221ENST00000510541 FBXO18Q8NFZ0 1043 aa19.62■□□□□ 0.73
CLDND1-221ENST00000510541 TBCKQ8TEA7 893 aa19.62■□□□□ 0.73
CLDND1-221ENST00000510541 TMX3Q96JJ7 454 aa19.62■□□□□ 0.73
CLDND1-221ENST00000510541 SDF4Q9BRK5 362 aa19.62■□□□□ 0.73
CLDND1-221ENST00000510541 TUT1Q9H6E5 874 aaKnown RBP19.62■□□□□ 0.73
CLDND1-221ENST00000510541 SLC9A2Q9UBY0 812 aa19.62■□□□□ 0.73
CLDND1-221ENST00000510541 LTBP2Q14767 1821 aa19.61■□□□□ 0.73
CLDND1-221ENST00000510541 IPO5O00410 1097 aaKnown RBP19.61■□□□□ 0.73
CLDND1-221ENST00000510541 PITPNM1O00562 1244 aa19.61■□□□□ 0.73
CLDND1-221ENST00000510541 JAK2O60674 1132 aa19.61■□□□□ 0.73
CLDND1-221ENST00000510541 PPFIA3O75145 1194 aa19.61■□□□□ 0.73
CLDND1-221ENST00000510541 LGALS2P05162 132 aa19.61■□□□□ 0.73
CLDND1-221ENST00000510541 ARP10275 920 aa19.61■□□□□ 0.73
CLDND1-221ENST00000510541 KRT2P35908 639 aa19.61■□□□□ 0.73
CLDND1-221ENST00000510541 TRIM29Q14134 588 aa19.61■□□□□ 0.73
CLDND1-221ENST00000510541 ZNF746Q6NUN9 644 aaPredicted RBP19.61■□□□□ 0.73
CLDND1-221ENST00000510541 PLPPR4Q7Z2D5 763 aa19.61■□□□□ 0.73
CLDND1-221ENST00000510541 SMAP1Q8IYB5 467 aaPredicted RBP19.61■□□□□ 0.73
CLDND1-221ENST00000510541 TNPO1Q92973 898 aaKnown RBP19.61■□□□□ 0.73
CLDND1-221ENST00000510541 PGBD1Q96JS3 809 aa19.61■□□□□ 0.73
CLDND1-221ENST00000510541 GTF2IRD1Q9UHL9 959 aa19.61■□□□□ 0.73
CLDND1-221ENST00000510541 ZNF215Q9UL58 517 aaPredicted RBP19.61■□□□□ 0.73
CLDND1-221ENST00000510541 CCDC194A0A1B0GVG4 234 aa19.6■□□□□ 0.73
CLDND1-221ENST00000510541 PQBP1O60828 265 aaKnown RBP19.6■□□□□ 0.73
CLDND1-221ENST00000510541 TIMP1P01033 207 aa19.6■□□□□ 0.73
CLDND1-221ENST00000510541 PSEN2P49810 448 aa19.6■□□□□ 0.73
CLDND1-221ENST00000510541 ITGB3BPQ13352 177 aaPredicted RBP19.6■□□□□ 0.73
CLDND1-221ENST00000510541 ORC2Q13416 577 aaPredicted RBP19.6■□□□□ 0.73
CLDND1-221ENST00000510541 CUL4AQ13619 759 aa19.6■□□□□ 0.73
CLDND1-221ENST00000510541 MFSD10Q14728 455 aa19.6■□□□□ 0.73
CLDND1-221ENST00000510541 KRT40Q6A162 431 aa19.6■□□□□ 0.73
CLDND1-221ENST00000510541 NEK8Q86SG6 692 aa19.6■□□□□ 0.73
CLDND1-221ENST00000510541 RDM1Q8NG50 284 aa19.6■□□□□ 0.73
CLDND1-221ENST00000510541 RASGRP4Q8TDF6 673 aa19.6■□□□□ 0.73
CLDND1-221ENST00000510541 AFAP1L1Q8TED9 768 aa19.6■□□□□ 0.73
CLDND1-221ENST00000510541 FOXP1Q9H334 677 aaPredicted RBP19.6■□□□□ 0.73
CLDND1-221ENST00000510541 SMARCAD1Q9H4L7 1026 aa19.6■□□□□ 0.73
CLDND1-221ENST00000510541 TMEM39AQ9NV64 488 aa19.6■□□□□ 0.73
CLDND1-221ENST00000510541 KCNJ14Q9UNX9 436 aa19.6■□□□□ 0.73
CLDND1-221ENST00000510541 GSTTP1A0A1W2PQM5 241 aa19.59■□□□□ 0.73
CLDND1-221ENST00000510541 TRIM43BA6NCK2 446 aa19.59■□□□□ 0.73
CLDND1-221ENST00000510541 B4GALT4O60513 344 aa19.59■□□□□ 0.73
CLDND1-221ENST00000510541 PARNO95453 639 aaKnown RBP19.59■□□□□ 0.73
CLDND1-221ENST00000510541 RPLP2P05387 115 aaKnown RBP19.59■□□□□ 0.73
CLDND1-221ENST00000510541 KRT76Q01546 638 aa19.59■□□□□ 0.73
CLDND1-221ENST00000510541 KIAA0753Q2KHM9 967 aa19.59■□□□□ 0.73
CLDND1-221ENST00000510541 TRIM43Q96BQ3 446 aaPredicted RBP19.59■□□□□ 0.73
CLDND1-221ENST00000510541 ZFP91Q96JP5 570 aaPredicted RBP19.59■□□□□ 0.73
CLDND1-221ENST00000510541 FAM20AQ96MK3 541 aa19.59■□□□□ 0.73
CLDND1-221ENST00000510541 BCAS3Q9H6U6 928 aa19.59■□□□□ 0.73
CLDND1-221ENST00000510541 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.59■□□□□ 0.73
CLDND1-221ENST00000510541 RANBP2P49792 3224 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms