RNA–Protein interactions for RNA: ENST00000510281.1

TRIO-215, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-215ENST00000510281 GPKOWQ92917 476 aaPredicted RBP eCLIP23.12■■□□□ 1.29
TRIO-215ENST00000510281 TANC1Q9C0D5 1861 aa23.12■■□□□ 1.29
TRIO-215ENST00000510281 NAP1L2Q9ULW6 460 aaPredicted RBP23.12■■□□□ 1.29
TRIO-215ENST00000510281 SEC24BO95487 1268 aa23.11■■□□□ 1.29
TRIO-215ENST00000510281 CDC27P30260 824 aa23.11■■□□□ 1.29
TRIO-215ENST00000510281 ARHGAP1Q07960 439 aa23.11■■□□□ 1.29
TRIO-215ENST00000510281 APOBRQ0VD83 1088 aa23.11■■□□□ 1.29
TRIO-215ENST00000510281 KRT40Q6A162 431 aa23.11■■□□□ 1.29
TRIO-215ENST00000510281 SESTD1Q86VW0 696 aa23.11■■□□□ 1.29
TRIO-215ENST00000510281 CAGE1Q8TC20 777 aa23.11■■□□□ 1.29
TRIO-215ENST00000510281 BRF1Q92994 677 aa23.11■■□□□ 1.29
TRIO-215ENST00000510281 FAM122AQ96E09 287 aa23.11■■□□□ 1.29
TRIO-215ENST00000510281 FTOQ9C0B1 505 aaKnown RBP eCLIP23.11■■□□□ 1.29
TRIO-215ENST00000510281 FAM217BQ9NTX9 383 aaPredicted RBP23.11■■□□□ 1.29
TRIO-215ENST00000510281 RBM28Q9NW13 759 aaKnown RBP23.11■■□□□ 1.29
TRIO-215ENST00000510281 MRVI1Q9Y6F6 885 aa23.11■■□□□ 1.29
TRIO-215ENST00000510281 FRMPD4Q14CM0 1322 aa23.1■■□□□ 1.29
TRIO-215ENST00000510281 MEIS2O14770 477 aa23.1■■□□□ 1.29
TRIO-215ENST00000510281 TLL1O43897 1013 aa23.1■■□□□ 1.29
TRIO-215ENST00000510281 LPXNO60711 386 aa23.1■■□□□ 1.29
TRIO-215ENST00000510281 CASTP20810 708 aaKnown RBP23.1■■□□□ 1.29
TRIO-215ENST00000510281 RPS6KB1P23443 525 aa23.1■■□□□ 1.29
TRIO-215ENST00000510281 FGD1P98174 961 aa23.1■■□□□ 1.29
TRIO-215ENST00000510281 FUT2Q10981 343 aa23.1■■□□□ 1.29
TRIO-215ENST00000510281 VSIG10LQ86VR7 867 aa23.1■■□□□ 1.29
TRIO-215ENST00000510281 AFAP1L1Q8TED9 768 aa23.1■■□□□ 1.29
TRIO-215ENST00000510281 AFG1LQ8WV93 481 aa23.1■■□□□ 1.29
TRIO-215ENST00000510281 CTAGE1Q96RT6 745 aa23.1■■□□□ 1.29
TRIO-215ENST00000510281 DDX41Q9UJV9 622 aaKnown RBP23.1■■□□□ 1.29
TRIO-215ENST00000510281 TCF20Q9UGU0 1960 aaKnown RBP23.1■■□□□ 1.29
TRIO-215ENST00000510281 SORBS3O60504 671 aa23.09■■□□□ 1.29
TRIO-215ENST00000510281 GH1P01241 217 aa23.09■■□□□ 1.29
TRIO-215ENST00000510281 GRB10Q13322 594 aa23.09■■□□□ 1.29
TRIO-215ENST00000510281 GPNMBQ14956 572 aa23.09■■□□□ 1.29
TRIO-215ENST00000510281 HEATR3Q7Z4Q2 680 aa23.09■■□□□ 1.29
TRIO-215ENST00000510281 CCDC155Q8N6L0 562 aa23.09■■□□□ 1.29
TRIO-215ENST00000510281 SMARCC2Q8TAQ2 1214 aa23.09■■□□□ 1.29
TRIO-215ENST00000510281 HLA-CQ95604 372 aa23.09■■□□□ 1.29
TRIO-215ENST00000510281 USP26Q9BXU7 913 aa23.09■■□□□ 1.29
TRIO-215ENST00000510281 NOD1Q9Y239 953 aa23.09■■□□□ 1.29
TRIO-215ENST00000510281 ARIH1Q9Y4X5 557 aaPredicted RBP23.09■■□□□ 1.29
TRIO-215ENST00000510281 KIAA1217Q5T5P2 1943 aa23.08■■□□□ 1.29
TRIO-215ENST00000510281 MMP3P08254 477 aa23.08■■□□□ 1.29
TRIO-215ENST00000510281 CCND2P30279 289 aa23.08■■□□□ 1.29
TRIO-215ENST00000510281 RBL2Q08999 1139 aa23.08■■□□□ 1.29
TRIO-215ENST00000510281 PTGISQ16647 500 aa23.08■■□□□ 1.29
TRIO-215ENST00000510281 UBE2SQ16763 222 aa23.08■■□□□ 1.29
TRIO-215ENST00000510281 WWC2Q6AWC2 1192 aa23.08■■□□□ 1.29
TRIO-215ENST00000510281 CUL5Q93034 780 aa23.08■■□□□ 1.29
TRIO-215ENST00000510281 C22orf23Q9BZE7 217 aa23.08■■□□□ 1.29
TRIO-215ENST00000510281 DAXXQ9UER7 740 aaPredicted RBP23.08■■□□□ 1.29
TRIO-215ENST00000510281 PIK3CDO00329 1044 aa23.07■■□□□ 1.28
TRIO-215ENST00000510281 KCNJ6P48051 423 aa23.07■■□□□ 1.28
TRIO-215ENST00000510281 METAP2P50579 478 aaKnown RBP eCLIP23.07■■□□□ 1.28
TRIO-215ENST00000510281 WDR5P61964 334 aaKnown RBP23.07■■□□□ 1.28
TRIO-215ENST00000510281 MRPS9P82933 396 aaKnown RBP23.07■■□□□ 1.28
TRIO-215ENST00000510281 TYW1BQ6NUM6 668 aa23.07■■□□□ 1.28
TRIO-215ENST00000510281 LMCD1Q9NZU5 365 aa23.07■■□□□ 1.28
TRIO-215ENST00000510281 TET1Q8NFU7 2136 aa23.06■■□□□ 1.28
TRIO-215ENST00000510281 PARNO95453 639 aaKnown RBP23.06■■□□□ 1.28
TRIO-215ENST00000510281 CXCL10P02778 98 aa23.06■■□□□ 1.28
TRIO-215ENST00000510281 ADD1P35611 737 aaKnown RBP23.06■■□□□ 1.28
TRIO-215ENST00000510281 GDF6Q6KF10 455 aaPredicted RBP23.06■■□□□ 1.28
TRIO-215ENST00000510281 KAT2BQ92831 832 aa23.06■■□□□ 1.28
TRIO-215ENST00000510281 EPHX3Q9H6B9 360 aa23.06■■□□□ 1.28
TRIO-215ENST00000510281 PSTPIP2Q9H939 334 aa23.06■■□□□ 1.28
TRIO-215ENST00000510281 EPB41L2O43491 1005 aaKnown RBP23.05■■□□□ 1.28
TRIO-215ENST00000510281 SELPP16109 830 aa23.05■■□□□ 1.28
TRIO-215ENST00000510281 UBA1P22314 1058 aaKnown RBP23.05■■□□□ 1.28
TRIO-215ENST00000510281 PSMA5P28066 241 aa23.05■■□□□ 1.28
TRIO-215ENST00000510281 RCAN1P53805 252 aa23.05■■□□□ 1.28
TRIO-215ENST00000510281 SP2Q02086 613 aa23.05■■□□□ 1.28
TRIO-215ENST00000510281 BECN1Q14457 450 aa23.05■■□□□ 1.28
TRIO-215ENST00000510281 SPRED2Q7Z698 418 aa23.05■■□□□ 1.28
TRIO-215ENST00000510281 DHX38Q92620 1227 aaKnown RBP23.05■■□□□ 1.28
TRIO-215ENST00000510281 AGXT2Q9BYV1 514 aa23.05■■□□□ 1.28
TRIO-215ENST00000510281 RTEL1Q9NZ71 1219 aa23.05■■□□□ 1.28
TRIO-215ENST00000510281 V9GY48 417 aaPredicted RBP23.05■■□□□ 1.28
TRIO-215ENST00000510281 NID2Q14112 1375 aa23.04■■□□□ 1.28
TRIO-215ENST00000510281 LCHNA4D1U4 455 aa23.04■■□□□ 1.28
TRIO-215ENST00000510281 CHMP4BP1P59074 171 aa23.04■■□□□ 1.28
TRIO-215ENST00000510281 SEMA3FQ13275 785 aa23.04■■□□□ 1.28
TRIO-215ENST00000510281 CNKSR3Q6P9H4 555 aa23.04■■□□□ 1.28
TRIO-215ENST00000510281 LRRC8DQ7L1W4 858 aa23.04■■□□□ 1.28
TRIO-215ENST00000510281 EMID1Q96A84 441 aaPredicted RBP23.04■■□□□ 1.28
TRIO-215ENST00000510281 LRFN3Q9BTN0 628 aa23.04■■□□□ 1.28
TRIO-215ENST00000510281 GGPS1O95749 300 aa23.03■■□□□ 1.28
TRIO-215ENST00000510281 RBM25P49756 843 aaKnown RBP23.03■■□□□ 1.28
TRIO-215ENST00000510281 NAPAP54920 295 aa23.03■■□□□ 1.28
TRIO-215ENST00000510281 RUFY3Q7L099 469 aa23.03■■□□□ 1.28
TRIO-215ENST00000510281 DHX37Q8IY37 1157 aaKnown RBP23.03■■□□□ 1.28
TRIO-215ENST00000510281 FBXL16Q8N461 479 aa23.03■■□□□ 1.28
TRIO-215ENST00000510281 UPF3BQ9BZI7 483 aaKnown RBP23.03■■□□□ 1.28
TRIO-215ENST00000510281 BCAS3Q9H6U6 928 aa23.03■■□□□ 1.28
TRIO-215ENST00000510281 ZSWIM6Q9HCJ5 1215 aa23.03■■□□□ 1.28
TRIO-215ENST00000510281 GTF2IRD1Q9UHL9 959 aa23.03■■□□□ 1.28
TRIO-215ENST00000510281 STXBP3O00186 592 aa23.02■■□□□ 1.28
TRIO-215ENST00000510281 NBNO60934 754 aa23.02■■□□□ 1.28
TRIO-215ENST00000510281 PPFIA3O75145 1194 aa23.02■■□□□ 1.28
TRIO-215ENST00000510281 GJB5O95377 273 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms