RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 PLIN4Q96Q06 1357 aa12.81□□□□□ -0.36
SNF8-207ENST00000509995 ZFYVE26Q68DK2 2539 aa12.81□□□□□ -0.36
SNF8-207ENST00000509995 C2CD4DB7Z1M9 353 aa12.8□□□□□ -0.36
SNF8-207ENST00000509995 ADRB1P08588 477 aa12.8□□□□□ -0.36
SNF8-207ENST00000509995 CTSHP09668 335 aa12.8□□□□□ -0.36
SNF8-207ENST00000509995 HOXB3P14651 431 aaPredicted RBP12.8□□□□□ -0.36
SNF8-207ENST00000509995 ATXN1P54253 815 aaKnown RBP12.8□□□□□ -0.36
SNF8-207ENST00000509995 LY6KQ17RY6 165 aa12.8□□□□□ -0.36
SNF8-207ENST00000509995 KCTD1Q719H9 257 aa12.8□□□□□ -0.36
SNF8-207ENST00000509995 KLHL23Q8NBE8 558 aa12.8□□□□□ -0.36
SNF8-207ENST00000509995 DNERQ8NFT8 737 aa12.8□□□□□ -0.36
SNF8-207ENST00000509995 CHMP4CQ96CF2 233 aa12.8□□□□□ -0.36
SNF8-207ENST00000509995 CHAMP1Q96JM3 812 aa12.8□□□□□ -0.36
SNF8-207ENST00000509995 DNAJC2Q99543 621 aaKnown RBP12.8□□□□□ -0.36
SNF8-207ENST00000509995 MRPL42Q9Y6G3 142 aaKnown RBP12.8□□□□□ -0.36
SNF8-207ENST00000509995 PER2O15055 1255 aa12.79□□□□□ -0.36
SNF8-207ENST00000509995 CAND2O75155 1236 aa12.79□□□□□ -0.36
SNF8-207ENST00000509995 ASGR2P07307 311 aa12.79□□□□□ -0.36
SNF8-207ENST00000509995 SRGAP2BP0DMP2 458 aa12.79□□□□□ -0.36
SNF8-207ENST00000509995 NPR3P17342 541 aa12.79□□□□□ -0.36
SNF8-207ENST00000509995 MCCP23508 829 aa12.79□□□□□ -0.36
SNF8-207ENST00000509995 DUSP6Q16828 381 aa12.79□□□□□ -0.36
SNF8-207ENST00000509995 SBK1Q52WX2 424 aa12.79□□□□□ -0.36
SNF8-207ENST00000509995 ZC3H14Q6PJT7 736 aaKnown RBP12.79□□□□□ -0.36
SNF8-207ENST00000509995 RNF207Q6ZRF8 634 aa12.79□□□□□ -0.36
SNF8-207ENST00000509995 AACSQ86V21 672 aa12.79□□□□□ -0.36
SNF8-207ENST00000509995 EMID1Q96A84 441 aaPredicted RBP12.79□□□□□ -0.36
SNF8-207ENST00000509995 CDCA3Q99618 268 aaPredicted RBP12.79□□□□□ -0.36
SNF8-207ENST00000509995 RTP3Q9BQQ7 232 aa12.79□□□□□ -0.36
SNF8-207ENST00000509995 RANBP17Q9H2T7 1088 aaKnown RBP12.79□□□□□ -0.36
SNF8-207ENST00000509995 FRYQ5TBA9 3013 aa12.78□□□□□ -0.36
SNF8-207ENST00000509995 B4DLN1 442 aa12.78□□□□□ -0.36
SNF8-207ENST00000509995 BCAR3O75815 825 aa12.78□□□□□ -0.36
SNF8-207ENST00000509995 MRPL12P52815 198 aaKnown RBP12.78□□□□□ -0.36
SNF8-207ENST00000509995 RPS6P62753 249 aaKnown RBP12.78□□□□□ -0.36
SNF8-207ENST00000509995 ANKRD54Q6NXT1 300 aa12.78□□□□□ -0.36
SNF8-207ENST00000509995 SYCE2Q6PIF2 218 aa12.78□□□□□ -0.36
SNF8-207ENST00000509995 TMEM184AQ6ZMB5 413 aa12.78□□□□□ -0.36
SNF8-207ENST00000509995 PPTC7Q8NI37 304 aa12.78□□□□□ -0.36
SNF8-207ENST00000509995 PRDM1O75626 825 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 DGKIO75912 1065 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 CHGBP05060 677 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 HOXC8P31273 242 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 TECP42680 631 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 KCNC3Q14003 757 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 RCSD1Q6JBY9 416 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 SEPT14Q6ZU15 432 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 RASGRP2Q7LDG7 609 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 ZNF444Q8N0Y2 327 aaPredicted RBP12.77□□□□□ -0.37
SNF8-207ENST00000509995 CLEC4DQ8WXI8 215 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 ARHGAP45Q92619 1136 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 ATP6V0A1Q93050 837 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 APOL5Q9BWW9 433 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 POMKQ9H5K3 350 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 SH2B1Q9NRF2 756 aaPredicted RBP12.77□□□□□ -0.37
SNF8-207ENST00000509995 CDH22Q9UJ99 828 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 ZZEF1O43149 2961 aa12.77□□□□□ -0.37
SNF8-207ENST00000509995 C17orf102A2RUQ5 167 aa12.76□□□□□ -0.37
SNF8-207ENST00000509995 MINDY4BA8MYZ0 360 aa12.76□□□□□ -0.37
SNF8-207ENST00000509995 HOXD8P13378 290 aaPredicted RBP12.76□□□□□ -0.37
SNF8-207ENST00000509995 ATP8B2P98198 1209 aa12.76□□□□□ -0.37
SNF8-207ENST00000509995 SLFN5Q08AF3 891 aa12.76□□□□□ -0.37
SNF8-207ENST00000509995 CMTR2Q8IYT2 770 aaKnown RBP12.76□□□□□ -0.37
SNF8-207ENST00000509995 MICAL1Q8TDZ2 1067 aa12.76□□□□□ -0.37
SNF8-207ENST00000509995 ZNF287Q9HBT7 754 aa12.76□□□□□ -0.37
SNF8-207ENST00000509995 CDV3Q9UKY7 258 aaKnown RBP12.76□□□□□ -0.37
SNF8-207ENST00000509995 DCDC2BA2VCK2 349 aa12.75□□□□□ -0.37
SNF8-207ENST00000509995 TREHO43280 583 aa12.75□□□□□ -0.37
SNF8-207ENST00000509995 HOXB8P17481 243 aaPredicted RBP12.75□□□□□ -0.37
SNF8-207ENST00000509995 UBE3CQ15386 1083 aa12.75□□□□□ -0.37
SNF8-207ENST00000509995 SUMF1Q8NBK3 374 aa12.75□□□□□ -0.37
SNF8-207ENST00000509995 NEDD1Q8NHV4 660 aa12.75□□□□□ -0.37
SNF8-207ENST00000509995 RIN2Q8WYP3 895 aaPredicted RBP12.75□□□□□ -0.37
SNF8-207ENST00000509995 NECTIN4Q96NY8 510 aa12.75□□□□□ -0.37
SNF8-207ENST00000509995 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNF8-207ENST00000509995 CACNA1IQ9P0X4 2223 aa12.75□□□□□ -0.37
SNF8-207ENST00000509995 DDX41Q9UJV9 622 aaKnown RBP12.75□□□□□ -0.37
SNF8-207ENST00000509995 DENND4AQ7Z401 1863 aa12.74□□□□□ -0.37
SNF8-207ENST00000509995 WDFY3Q8IZQ1 3526 aa12.74□□□□□ -0.37
SNF8-207ENST00000509995 CT47B1P0C2W7 299 aaPredicted RBP12.74□□□□□ -0.37
SNF8-207ENST00000509995 TSPY3P0CV98 308 aa12.74□□□□□ -0.37
SNF8-207ENST00000509995 TSPY8P0CW00 308 aa12.74□□□□□ -0.37
SNF8-207ENST00000509995 UBE3AQ05086 875 aa12.74□□□□□ -0.37
SNF8-207ENST00000509995 DMWDQ09019 674 aa12.74□□□□□ -0.37
SNF8-207ENST00000509995 LAMC2Q13753 1193 aa12.74□□□□□ -0.37
SNF8-207ENST00000509995 ZDHHC14Q8IZN3 488 aa12.74□□□□□ -0.37
SNF8-207ENST00000509995 CRIPAKQ8N1N5 446 aa12.74□□□□□ -0.37
SNF8-207ENST00000509995 TDRD5Q8NAT2 981 aaKnown RBP12.74□□□□□ -0.37
SNF8-207ENST00000509995 RASGRP4Q8TDF6 673 aa12.74□□□□□ -0.37
SNF8-207ENST00000509995 RTKNQ9BST9 563 aa12.74□□□□□ -0.37
SNF8-207ENST00000509995 PUS7LQ9H0K6 701 aaKnown RBP12.74□□□□□ -0.37
SNF8-207ENST00000509995 ERVK-5Q9HDB9 667 aa12.74□□□□□ -0.37
SNF8-207ENST00000509995 PAG1Q9NWQ8 432 aa12.74□□□□□ -0.37
SNF8-207ENST00000509995 GSG1L2A8MUP6 293 aa12.73□□□□□ -0.37
SNF8-207ENST00000509995 PRR5-ARHGAP8B1AHC4 643 aa12.73□□□□□ -0.37
SNF8-207ENST00000509995 ENPP3O14638 875 aa12.73□□□□□ -0.37
SNF8-207ENST00000509995 PPFIA3O75145 1194 aa12.73□□□□□ -0.37
SNF8-207ENST00000509995 ARHGAP8P85298 464 aa12.73□□□□□ -0.37
SNF8-207ENST00000509995 PAN2Q504Q3 1202 aaKnown RBP12.73□□□□□ -0.37
SNF8-207ENST00000509995 FAM26DQ5JW98 314 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms