RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 HMGN5P82970 282 aaKnown RBP5.43□□□□□ -1.54
NIPBL-206ENST00000509429 PSMD2Q13200 908 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 KCTD2Q14681 263 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 SLC9A5Q14940 896 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 MAPRE1Q15691 268 aaKnown RBP5.43□□□□□ -1.54
NIPBL-206ENST00000509429 CCDC92Q53HC0 331 aaPredicted RBP5.43□□□□□ -1.54
NIPBL-206ENST00000509429 EPHA10Q5JZY3 1008 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 PRR31Q5SQ13 230 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 KLHL10Q6JEL2 608 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 CC2D1AQ6P1N0 951 aaPredicted RBP5.43□□□□□ -1.54
NIPBL-206ENST00000509429 CATIPQ7Z7H3 387 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 RPUSD2Q8IZ73 545 aaKnown RBP5.43□□□□□ -1.54
NIPBL-206ENST00000509429 TTLL6Q8N841 843 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 EXTL1Q92935 676 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 ADOQ96SZ5 270 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 OSBPL7Q9BZF2 842 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 TANGO6Q9C0B7 1094 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 PIF1Q9H611 641 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 CASS4Q9NQ75 786 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 CHST7Q9NS84 486 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 GOLGA6L3A6NEY3 463 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 TMEM88BA6NKF7 163 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 CHURC1-FNTBB4DL54 471 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 IGHDP01880 384 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 FGAP02671 866 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 ADH4P08319 380 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 VAV1P15498 845 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 BMP5P22003 454 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 TACR1P25103 407 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 ERCC5P28715 1186 aaPredicted RBP5.42□□□□□ -1.54
NIPBL-206ENST00000509429 CORO7P57737 925 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 UBE4AQ14139 1066 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 SAFB2Q14151 953 aaKnown RBP eCLIP5.42□□□□□ -1.54
NIPBL-206ENST00000509429 LARP1BQ659C4 914 aaKnown RBP5.42□□□□□ -1.54
NIPBL-206ENST00000509429 FMNL3Q8IVF7 1028 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 HSCBQ8IWL3 235 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 NAT16Q8N8M0 369 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 ACRBPQ8NEB7 543 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 LARP4BQ92615 738 aaKnown RBP5.42□□□□□ -1.54
NIPBL-206ENST00000509429 CCDC47Q96A33 483 aaKnown RBP5.42□□□□□ -1.54
NIPBL-206ENST00000509429 MBD6Q96DN6 1003 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 NEUROD6Q96NK8 337 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 KIF2CQ99661 725 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 CCDC94Q9BW85 323 aaPredicted RBP5.42□□□□□ -1.54
NIPBL-206ENST00000509429 MIR1-1HGQ9H1L0 117 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 ZHX3Q9H4I2 956 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 PCDH12Q9NPG4 1184 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 STK26Q9P289 416 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 TCEAL9Q9UHQ7 104 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 ODF2LQ9ULJ1 636 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 ISY1Q9ULR0 285 aaKnown RBP5.42□□□□□ -1.54
NIPBL-206ENST00000509429 CEP83Q9Y592 693 aa5.42□□□□□ -1.54
NIPBL-206ENST00000509429 IPO5O00410 1097 aaKnown RBP5.41□□□□□ -1.54
NIPBL-206ENST00000509429 PES1O00541 588 aaKnown RBP5.41□□□□□ -1.54
NIPBL-206ENST00000509429 MPHOSPH10O00566 681 aaKnown RBP5.41□□□□□ -1.54
NIPBL-206ENST00000509429 KIF1CO43896 1103 aaKnown RBP5.41□□□□□ -1.54
NIPBL-206ENST00000509429 GLI4P10075 376 aa5.41□□□□□ -1.54
NIPBL-206ENST00000509429 KCNA2P16389 499 aa5.41□□□□□ -1.54
NIPBL-206ENST00000509429 RNF187Q5TA31 235 aaPredicted RBP5.41□□□□□ -1.54
NIPBL-206ENST00000509429 PKN3Q6P5Z2 889 aa5.41□□□□□ -1.54
NIPBL-206ENST00000509429 STAG1Q8WVM7 1258 aa5.41□□□□□ -1.54
NIPBL-206ENST00000509429 MAP7D2Q96T17 732 aa5.41□□□□□ -1.54
NIPBL-206ENST00000509429 SUN2Q9UH99 717 aa5.41□□□□□ -1.54
NIPBL-206ENST00000509429 INO80B-WBP1J3KQ70 363 aa5.4□□□□□ -1.54
NIPBL-206ENST00000509429 RAMP2O60895 175 aa5.4□□□□□ -1.54
NIPBL-206ENST00000509429 CYP1A1P04798 512 aaPredicted RBP5.4□□□□□ -1.54
NIPBL-206ENST00000509429 C8BP07358 591 aa5.4□□□□□ -1.54
NIPBL-206ENST00000509429 HSP90AB1P08238 724 aaKnown RBP5.4□□□□□ -1.54
NIPBL-206ENST00000509429 CLK1P49759 484 aaKnown RBP5.4□□□□□ -1.54
NIPBL-206ENST00000509429 ZNF362Q5T0B9 420 aaPredicted RBP5.4□□□□□ -1.54
NIPBL-206ENST00000509429 PAPD7Q5XG87 772 aaKnown RBP5.4□□□□□ -1.54
NIPBL-206ENST00000509429 CCSAPQ6IQ19 270 aaPredicted RBP5.4□□□□□ -1.54
NIPBL-206ENST00000509429 KRTAP5-1Q6L8H4 278 aa5.4□□□□□ -1.54
NIPBL-206ENST00000509429 CCDC73Q6ZRK6 1079 aa5.4□□□□□ -1.54
NIPBL-206ENST00000509429 USP48Q86UV5 1035 aa5.4□□□□□ -1.54
NIPBL-206ENST00000509429 JAZF1Q86VZ6 243 aa5.4□□□□□ -1.54
NIPBL-206ENST00000509429 LMNTD2Q8IXW0 634 aa5.4□□□□□ -1.54
NIPBL-206ENST00000509429 RBCK1Q9BYM8 510 aa5.4□□□□□ -1.54
NIPBL-206ENST00000509429 MEGF9Q9H1U4 602 aa5.4□□□□□ -1.54
NIPBL-206ENST00000509429 RXFP1Q9HBX9 757 aa5.4□□□□□ -1.54
NIPBL-206ENST00000509429 DDX56Q9NY93 547 aaKnown RBP5.4□□□□□ -1.54
NIPBL-206ENST00000509429 DIS3Q9Y2L1 958 aaKnown RBP5.4□□□□□ -1.54
NIPBL-206ENST00000509429 SUPT16HQ9Y5B9 1047 aaKnown RBP5.4□□□□□ -1.54
NIPBL-206ENST00000509429 PNMA6FA0A0J9YX94 578 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 GIPC1O14908 333 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 PLSCR1O15162 318 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 CTAGE5O15320 804 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 MTA2O94776 668 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 DMTNQ08495 405 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 IFT88Q13099 833 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 DCTN1Q14203 1278 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 BMS1Q14692 1282 aaKnown RBP5.39□□□□□ -1.55
NIPBL-206ENST00000509429 NBPF12Q5TAG4 269 aaPredicted RBP5.39□□□□□ -1.55
NIPBL-206ENST00000509429 CCDC70Q6NSX1 233 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 AGMOQ6ZNB7 445 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 UBE2Q1Q7Z7E8 422 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 NLGN2Q8NFZ4 835 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 JDP2Q8WYK2 163 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 GOLGA1Q92805 767 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 C8orf48Q96LL4 319 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms