RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 SCRN1Q12765 414 aa18.45■□□□□ 0.54
PDLIM5-212ENST00000509333 KIAA0753Q2KHM9 967 aa18.45■□□□□ 0.54
PDLIM5-212ENST00000509333 TMEM199Q8N511 208 aa18.45■□□□□ 0.54
PDLIM5-212ENST00000509333 LRCH3Q96II8 777 aa18.45■□□□□ 0.54
PDLIM5-212ENST00000509333 CTAGE1Q96RT6 745 aa18.45■□□□□ 0.54
PDLIM5-212ENST00000509333 HIPK3Q9H422 1215 aa18.45■□□□□ 0.54
PDLIM5-212ENST00000509333 HDAC6Q9UBN7 1215 aa18.45■□□□□ 0.54
PDLIM5-212ENST00000509333 UMODL1Q5DID0 1318 aa18.45■□□□□ 0.54
PDLIM5-212ENST00000509333 H3BRB1 525 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 CPLX1O14810 134 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 EDIL3O43854 480 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 CYP3A4P08684 503 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 ARP10275 920 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 SREBF1P36956 1147 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 NEK4P51957 841 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 MFSD10Q14728 455 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 ANKRD1Q15327 319 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 CEP55Q53EZ4 464 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 MCTP2Q6DN12 878 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 GDF6Q6KF10 455 aaPredicted RBP18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 TRIM22Q8IYM9 498 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 VWCEQ96DN2 955 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 ALG1Q9BT22 464 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 SLKQ9H2G2 1235 aaPredicted RBP18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 TUT1Q9H6E5 874 aaKnown RBP18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 KCNH7Q9NS40 1196 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 VPS54Q9P1Q0 977 aa18.44■□□□□ 0.54
PDLIM5-212ENST00000509333 GSTTP1A0A1W2PQM5 241 aa18.43■□□□□ 0.54
PDLIM5-212ENST00000509333 DEXIO95424 95 aa18.43■□□□□ 0.54
PDLIM5-212ENST00000509333 ZNF286BP0CG31 522 aa18.43■□□□□ 0.54
PDLIM5-212ENST00000509333 ARHGAP4P98171 946 aa18.43■□□□□ 0.54
PDLIM5-212ENST00000509333 PPIGQ13427 754 aaKnown RBP eCLIP18.43■□□□□ 0.54
PDLIM5-212ENST00000509333 MTMR1Q13613 665 aa18.43■□□□□ 0.54
PDLIM5-212ENST00000509333 HIC1Q14526 733 aa18.43■□□□□ 0.54
PDLIM5-212ENST00000509333 PTGISQ16647 500 aa18.43■□□□□ 0.54
PDLIM5-212ENST00000509333 CPLX2Q6PUV4 134 aaKnown RBP18.43■□□□□ 0.54
PDLIM5-212ENST00000509333 KATNAL1Q9BW62 490 aa18.43■□□□□ 0.54
PDLIM5-212ENST00000509333 WNT8AQ9H1J5 351 aa18.43■□□□□ 0.54
PDLIM5-212ENST00000509333 GTF2IRD1Q9UHL9 959 aa18.43■□□□□ 0.54
PDLIM5-212ENST00000509333 LAMA3Q16787 3333 aa18.43■□□□□ 0.54
PDLIM5-212ENST00000509333 SZT2Q5T011 3432 aa18.43■□□□□ 0.54
PDLIM5-212ENST00000509333 NOP56O00567 594 aaKnown RBP18.42■□□□□ 0.54
PDLIM5-212ENST00000509333 CTDNEP1O95476 244 aa18.42■□□□□ 0.54
PDLIM5-212ENST00000509333 LGALS2P05162 132 aa18.42■□□□□ 0.54
PDLIM5-212ENST00000509333 CCL23P55773 120 aa18.42■□□□□ 0.54
PDLIM5-212ENST00000509333 ME3Q16798 604 aa18.42■□□□□ 0.54
PDLIM5-212ENST00000509333 TMEM240Q5SV17 173 aa18.42■□□□□ 0.54
PDLIM5-212ENST00000509333 REXO1Q8N1G1 1221 aaKnown RBP18.42■□□□□ 0.54
PDLIM5-212ENST00000509333 C7orf31Q8N865 590 aa18.42■□□□□ 0.54
PDLIM5-212ENST00000509333 BICD2Q8TD16 824 aa18.42■□□□□ 0.54
PDLIM5-212ENST00000509333 SEPT1Q8WYJ6 367 aa18.42■□□□□ 0.54
PDLIM5-212ENST00000509333 KIF2CQ99661 725 aa18.42■□□□□ 0.54
PDLIM5-212ENST00000509333 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.42■□□□□ 0.54
PDLIM5-212ENST00000509333 IL23AQ9NPF7 189 aa18.42■□□□□ 0.54
PDLIM5-212ENST00000509333 LTBP2Q14767 1821 aa18.42■□□□□ 0.54
PDLIM5-212ENST00000509333 FAM86B1E9PN63 330 aa18.41■□□□□ 0.54
PDLIM5-212ENST00000509333 FAM86B2P0C5J1 330 aa18.41■□□□□ 0.54
PDLIM5-212ENST00000509333 ACRP10323 421 aa18.41■□□□□ 0.54
PDLIM5-212ENST00000509333 ZNF76P36508 570 aa18.41■□□□□ 0.54
PDLIM5-212ENST00000509333 NLRP5P59047 1200 aa18.41■□□□□ 0.54
PDLIM5-212ENST00000509333 ZNF200P98182 395 aaPredicted RBP18.41■□□□□ 0.54
PDLIM5-212ENST00000509333 GPR153Q6NV75 609 aa18.41■□□□□ 0.54
PDLIM5-212ENST00000509333 ZNF365Q70YC5 407 aa18.41■□□□□ 0.54
PDLIM5-212ENST00000509333 NIPA1Q7RTP0 329 aa18.41■□□□□ 0.54
PDLIM5-212ENST00000509333 CCDC148Q8NFR7 591 aa18.41■□□□□ 0.54
PDLIM5-212ENST00000509333 RASGRP4Q8TDF6 673 aa18.41■□□□□ 0.54
PDLIM5-212ENST00000509333 AIFM3Q96NN9 605 aa18.41■□□□□ 0.54
PDLIM5-212ENST00000509333 RNPEPQ9H4A4 650 aa18.41■□□□□ 0.54
PDLIM5-212ENST00000509333 AGO4Q9HCK5 861 aaKnown RBP18.41■□□□□ 0.54
PDLIM5-212ENST00000509333 PKD2L1Q9P0L9 805 aa18.41■□□□□ 0.54
PDLIM5-212ENST00000509333 DTNBO60941 627 aa18.4■□□□□ 0.54
PDLIM5-212ENST00000509333 UTP14CQ5TAP6 766 aaKnown RBP18.4■□□□□ 0.54
PDLIM5-212ENST00000509333 RASIP1Q5U651 963 aa18.4■□□□□ 0.54
PDLIM5-212ENST00000509333 RPUSD2Q8IZ73 545 aaKnown RBP18.4■□□□□ 0.54
PDLIM5-212ENST00000509333 FAM177A1Q8N128 213 aaPredicted RBP18.4■□□□□ 0.54
PDLIM5-212ENST00000509333 NECAB1Q8N987 351 aa18.4■□□□□ 0.54
PDLIM5-212ENST00000509333 SCLYQ96I15 445 aa18.4■□□□□ 0.54
PDLIM5-212ENST00000509333 PCDHA4Q9UN74 947 aa18.4■□□□□ 0.54
PDLIM5-212ENST00000509333 IGLV3-22A0A075B6J6 115 aa18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 M0R2N6 131 aa18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 PITPNM1O00562 1244 aa18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 DHX15O43143 795 aaKnown RBP18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 FGBP02675 491 aa18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 IQCF3P0C7M6 154 aa18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 FDPSP14324 419 aaKnown RBP18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 CIITAP33076 1130 aa18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 USP11P51784 963 aa18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 SP4Q02446 784 aa18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 ITGB3BPQ13352 177 aaPredicted RBP18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 BFSP2Q13515 415 aa18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 NPY5RQ15761 445 aa18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 PLA2G4DQ86XP0 818 aa18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 RETREG2Q8NC44 543 aa18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 DHX38Q92620 1227 aaKnown RBP18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 NOD1Q9Y239 953 aa18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 NFASCO94856 1347 aa18.39■□□□□ 0.53
PDLIM5-212ENST00000509333 CDKL5O76039 1030 aa18.38■□□□□ 0.53
PDLIM5-212ENST00000509333 ATG7O95352 703 aa18.38■□□□□ 0.53
PDLIM5-212ENST00000509333 LARGE1O95461 756 aa18.38■□□□□ 0.53
PDLIM5-212ENST00000509333 HOXC8P31273 242 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms