RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 KIAA1755Q5JYT7 1200 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 NCAPH2Q6IBW4 605 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 POTEBQ6S5H4 581 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 ZNF662Q6ZS27 426 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 MIGA2Q7L4E1 593 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 DYMQ7RTS9 669 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 KCNK18Q7Z418 384 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 CATSPER3Q86XQ3 398 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 ZC3H3Q8IXZ2 948 aaKnown RBP10.26□□□□□ -0.77
HTT-205ENST00000509043 MICALL2Q8IY33 904 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 CCDC170Q8IYT3 715 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 P2RX7Q99572 595 aaKnown RBP10.26□□□□□ -0.77
HTT-205ENST00000509043 SGIP1Q9BQI5 828 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 NUCKS1Q9H1E3 243 aaKnown RBP10.26□□□□□ -0.77
HTT-205ENST00000509043 SEMA6BQ9H3T3 888 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 SEL1LQ9UBV2 794 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 CNOT7Q9UIV1 285 aaKnown RBP10.26□□□□□ -0.77
HTT-205ENST00000509043 ZNF112Q9UJU3 913 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 FAM184BQ9ULE4 1060 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 CCPG1Q9ULG6 757 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 COL4A3BPQ9Y5P4 624 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 ADGRG1Q9Y653 693 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 RPTORQ8N122 1335 aa10.26□□□□□ -0.77
HTT-205ENST00000509043 C19orf81C9J6K1 198 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 E9PMD0 336 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 ZBED4O75132 1171 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 MED24O75448 989 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 PSMD10O75832 226 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 SSBP05455 408 aaKnown RBP eCLIP10.25□□□□□ -0.77
HTT-205ENST00000509043 SPATA31C1P0DKV0 1188 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 HOXA13P31271 388 aaPredicted RBP10.25□□□□□ -0.77
HTT-205ENST00000509043 HOXD11P31277 338 aaPredicted RBP10.25□□□□□ -0.77
HTT-205ENST00000509043 PRELPP51888 382 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 OAZ1P54368 228 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 SNAP25P60880 206 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 KRT83P78385 493 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 EPHA7Q15375 998 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 ECM1Q16610 540 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 MEA1Q16626 185 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 BMT2Q1RMZ1 405 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 HERC4Q5GLZ8 1057 aaPredicted RBP10.25□□□□□ -0.77
HTT-205ENST00000509043 LRCH2Q5VUJ6 765 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 CCDC174Q6PII3 467 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 TRIM65Q6PJ69 517 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 SYT10Q6XYQ8 523 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 LRRC55Q6ZSA7 311 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 STXBP4Q6ZWJ1 553 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 OTOP1Q7RTM1 612 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 TXLNBQ8N3L3 684 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 C12orf42Q96LP6 360 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 HSD17B14Q9BPX1 270 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 EIF2AK1Q9BQI3 630 aaKnown RBP10.25□□□□□ -0.77
HTT-205ENST00000509043 SLC38A10Q9HBR0 1119 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 DNAI1Q9UI46 699 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 CTDP1Q9Y5B0 961 aaPredicted RBP10.25□□□□□ -0.77
HTT-205ENST00000509043 PCDHA2Q9Y5H9 948 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 UBE4BO95155 1302 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 FRMPD4Q14CM0 1322 aa10.25□□□□□ -0.77
HTT-205ENST00000509043 B4DLN1 442 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 PES1O00541 588 aaKnown RBP10.24□□□□□ -0.77
HTT-205ENST00000509043 EIF3DO15371 548 aaKnown RBP eCLIP10.24□□□□□ -0.77
HTT-205ENST00000509043 CALUO43852 315 aaPredicted RBP10.24□□□□□ -0.77
HTT-205ENST00000509043 KIF5CO60282 957 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 GAS7O60861 476 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 TBCAO75347 108 aaKnown RBP10.24□□□□□ -0.77
HTT-205ENST00000509043 IPO7O95373 1038 aaKnown RBP10.24□□□□□ -0.77
HTT-205ENST00000509043 TRIM21P19474 475 aaKnown RBP10.24□□□□□ -0.77
HTT-205ENST00000509043 RPL13P26373 211 aaKnown RBP10.24□□□□□ -0.77
HTT-205ENST00000509043 CASQ1P31415 396 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 HNRNPH3P31942 346 aaKnown RBP10.24□□□□□ -0.77
HTT-205ENST00000509043 CYLC1P35663 651 aaPredicted RBP10.24□□□□□ -0.77
HTT-205ENST00000509043 GIT2Q14161 759 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 NFIL3Q16649 462 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 MIIPQ5JXC2 388 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 PCNX4Q63HM2 1172 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 TOGARAM2Q6ZUX3 1019 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 CREBRFQ8IUR6 639 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 SCYL3Q8IZE3 742 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 EHBP1Q8NDI1 1231 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 CPLX3Q8WVH0 158 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 ANKRD7Q92527 254 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 NACC1Q96RE7 527 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 MXRA8Q9BRK3 442 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 TEKT3Q9BXF9 490 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 TTYH3Q9C0H2 523 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 PDCL3Q9H2J4 239 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 NDST4Q9H3R1 872 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 OLFML3Q9NRN5 406 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 EMILIN3Q9NT22 766 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 HACL1Q9UJ83 578 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 ODF2LQ9ULJ1 636 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 PPP1R9AQ9ULJ8 1098 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 TRAF3IP3Q9Y228 551 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 BCS1LQ9Y276 419 aa10.24□□□□□ -0.77
HTT-205ENST00000509043 TTC26A0AVF1 554 aa10.23□□□□□ -0.77
HTT-205ENST00000509043 POTEFA5A3E0 1075 aa10.23□□□□□ -0.77
HTT-205ENST00000509043 SOWAHDA6NJG2 315 aa10.23□□□□□ -0.77
HTT-205ENST00000509043 PDXKO00764 312 aa10.23□□□□□ -0.77
HTT-205ENST00000509043 CETN3O15182 167 aa10.23□□□□□ -0.77
HTT-205ENST00000509043 SLC16A3O15427 465 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms