RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 C16orf70Q9BSU1 422 aa16.99■□□□□ 0.31
UBE2D3-228ENST00000508974 PBX4Q9BYU1 374 aa16.99■□□□□ 0.31
UBE2D3-228ENST00000508974 FTOQ9C0B1 505 aaKnown RBP eCLIP16.99■□□□□ 0.318e-9■□□□□ 8.1
UBE2D3-228ENST00000508974 MTIF3Q9H2K0 278 aaKnown RBP16.99■□□□□ 0.31
UBE2D3-228ENST00000508974 STXBP3O00186 592 aa16.98■□□□□ 0.31
UBE2D3-228ENST00000508974 HAS3O00219 553 aa16.98■□□□□ 0.31
UBE2D3-228ENST00000508974 PITPNM1O00562 1244 aa16.98■□□□□ 0.31
UBE2D3-228ENST00000508974 HOXD8P13378 290 aaPredicted RBP16.98■□□□□ 0.31
UBE2D3-228ENST00000508974 ADCY7P51828 1080 aa16.98■□□□□ 0.31
UBE2D3-228ENST00000508974 NEDD9Q14511 834 aa16.98■□□□□ 0.31
UBE2D3-228ENST00000508974 HIC1Q14526 733 aa16.98■□□□□ 0.31
UBE2D3-228ENST00000508974 METTL7BQ6UX53 244 aa16.98■□□□□ 0.31
UBE2D3-228ENST00000508974 TRIM50Q86XT4 487 aa16.98■□□□□ 0.31
UBE2D3-228ENST00000508974 CCDC155Q8N6L0 562 aa16.98■□□□□ 0.31
UBE2D3-228ENST00000508974 TET1Q8NFU7 2136 aa16.98■□□□□ 0.31
UBE2D3-228ENST00000508974 TIFAQ96CG3 184 aa16.98■□□□□ 0.31
UBE2D3-228ENST00000508974 TMEM260Q9NX78 707 aa16.98■□□□□ 0.31
UBE2D3-228ENST00000508974 EYSQ5T1H1 3165 aa16.98■□□□□ 0.31
UBE2D3-228ENST00000508974 SMCO2A6NFE2 343 aa16.97■□□□□ 0.31
UBE2D3-228ENST00000508974 H3BRB1 525 aa16.97■□□□□ 0.31
UBE2D3-228ENST00000508974 ATP9AO75110 1047 aa16.97■□□□□ 0.31
UBE2D3-228ENST00000508974 ITGB5P18084 799 aa16.97■□□□□ 0.31
UBE2D3-228ENST00000508974 PSMA5P28066 241 aa16.97■□□□□ 0.31
UBE2D3-228ENST00000508974 RABGGTBP53611 331 aa16.97■□□□□ 0.31
UBE2D3-228ENST00000508974 XRRA1Q6P2D8 792 aa16.97■□□□□ 0.31
UBE2D3-228ENST00000508974 WNT8BQ93098 351 aa16.97■□□□□ 0.31
UBE2D3-228ENST00000508974 GPR20Q99678 358 aa16.97■□□□□ 0.31
UBE2D3-228ENST00000508974 TUT1Q9H6E5 874 aaKnown RBP16.97■□□□□ 0.31
UBE2D3-228ENST00000508974 RIC8AQ9NPQ8 531 aa16.97■□□□□ 0.31
UBE2D3-228ENST00000508974 SLC4A7Q9Y6M7 1214 aa16.97■□□□□ 0.31
UBE2D3-228ENST00000508974 PTPRSQ13332 1948 aa16.97■□□□□ 0.31
UBE2D3-228ENST00000508974 CCT2P78371 535 aaKnown RBP16.96■□□□□ 0.31
UBE2D3-228ENST00000508974 MTMR1Q13613 665 aa16.96■□□□□ 0.31
UBE2D3-228ENST00000508974 PPP1R18Q6NYC8 613 aa16.96■□□□□ 0.31
UBE2D3-228ENST00000508974 LRRC8DQ7L1W4 858 aa16.96■□□□□ 0.31
UBE2D3-228ENST00000508974 SLC17A8Q8NDX2 589 aa16.96■□□□□ 0.31
UBE2D3-228ENST00000508974 CAGE1Q8TC20 777 aa16.96■□□□□ 0.31
UBE2D3-228ENST00000508974 PHKBQ93100 1093 aa16.96■□□□□ 0.31
UBE2D3-228ENST00000508974 GPRASP2Q96D09 838 aa16.96■□□□□ 0.31
UBE2D3-228ENST00000508974 LARP6Q9BRS8 491 aaKnown RBP16.96■□□□□ 0.31
UBE2D3-228ENST00000508974 ZNF576Q9H609 170 aa16.96■□□□□ 0.31
UBE2D3-228ENST00000508974 EHMT1Q9H9B1 1298 aa16.96■□□□□ 0.31
UBE2D3-228ENST00000508974 NCOA5Q9HCD5 579 aaKnown RBP16.96■□□□□ 0.31
UBE2D3-228ENST00000508974 BARHL2Q9NY43 387 aa16.96■□□□□ 0.31
UBE2D3-228ENST00000508974 CCDC196A0A1B0GTZ2 297 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 PFKMP08237 780 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 SMIM10L2AP0DMW4 78 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 SMIM10L2BP0DMW5 78 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 CKBP12277 381 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 ACTN1P12814 892 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 SELPP16109 830 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 KCNA2P16389 499 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 RFC2P35250 354 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 RCAN1P53805 252 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 PTK7Q13308 1070 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 GRIN2CQ14957 1233 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 POTEHQ6S545 545 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 AFAP1L1Q8TED9 768 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 USP26Q9BXU7 913 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 ANO3Q9BYT9 981 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 UPF3BQ9BZI7 483 aaKnown RBP16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 NKX2-4Q9H2Z4 354 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 MSRAQ9UJ68 235 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 YBX2Q9Y2T7 364 aaKnown RBP16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 UBIAD1Q9Y5Z9 338 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 KAT6AQ92794 2004 aa16.95■□□□□ 0.3
UBE2D3-228ENST00000508974 C17orf102A2RUQ5 167 aa16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 hCG_1984214I3L0E3 225 aa16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 SCG2P13521 617 aa16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 MYOGP15173 224 aa16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 FOSL2P15408 326 aa16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 TCF7P36402 384 aaPredicted RBP16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 PFKFB3Q16875 520 aaPredicted RBP16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 ZNF618Q5T7W0 954 aa16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 JAKMIP3Q5VZ66 844 aa16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 RUFY3Q7L099 469 aa16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 ZNF713Q8N859 430 aaPredicted RBP16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 CYP2W1Q8TAV3 490 aa16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 ATP6V0A1Q93050 837 aa16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 CDHR1Q96JP9 859 aa16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 SENP7Q9BQF6 1050 aa16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 CHD9Q3L8U1 2897 aa16.94■□□□□ 0.3
UBE2D3-228ENST00000508974 NID2Q14112 1375 aa16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 TMEM265A0A087WTH1 108 aa16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 ADAMTS3O15072 1205 aa16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 CENPBP07199 599 aaPredicted RBP16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 ATP2A2P16615 1042 aaKnown RBP16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 MARK3P27448 753 aa16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 TOB2Q14106 344 aaPredicted RBP16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 RAB30Q15771 203 aa16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 GIMAP8Q8ND71 665 aaPredicted RBP16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 UIMC1Q96RL1 719 aa16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 SLC26A6Q9BXS9 759 aa16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 AGXT2Q9BYV1 514 aa16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 RNPEPQ9H4A4 650 aa16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 ZSWIM6Q9HCJ5 1215 aa16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 JADE2Q9NQC1 790 aa16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 SETD4Q9NVD3 440 aa16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 ZNF215Q9UL58 517 aaPredicted RBP16.93■□□□□ 0.3
UBE2D3-228ENST00000508974 CYP46A1Q9Y6A2 500 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms