RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 DBX1A6NMT0 343 aa10.4□□□□□ -0.74
CHD1-205ENST00000508756 DNAJC8O75937 253 aaPredicted RBP10.4□□□□□ -0.74
CHD1-205ENST00000508756 CKMP06732 381 aa10.4□□□□□ -0.74
CHD1-205ENST00000508756 PDE6AP16499 860 aa10.4□□□□□ -0.74
CHD1-205ENST00000508756 ST5P78524 1137 aa10.4□□□□□ -0.74
CHD1-205ENST00000508756 GRIN1Q05586 938 aa10.4□□□□□ -0.74
CHD1-205ENST00000508756 TUSC3Q13454 348 aa10.4□□□□□ -0.74
CHD1-205ENST00000508756 CNKSR3Q6P9H4 555 aa10.4□□□□□ -0.74
CHD1-205ENST00000508756 CD300LDQ6UXZ3 194 aa10.4□□□□□ -0.74
CHD1-205ENST00000508756 C16orf59Q7L2K0 433 aa10.4□□□□□ -0.74
CHD1-205ENST00000508756 CISD2Q8N5K1 135 aaKnown RBP10.4□□□□□ -0.74
CHD1-205ENST00000508756 SH3RF2Q8TEC5 729 aa10.4□□□□□ -0.74
CHD1-205ENST00000508756 CLEC4DQ8WXI8 215 aa10.4□□□□□ -0.74
CHD1-205ENST00000508756 DDX11Q96FC9 970 aa10.4□□□□□ -0.74
CHD1-205ENST00000508756 RFXAPO00287 272 aa10.39□□□□□ -0.75
CHD1-205ENST00000508756 NUAK1O60285 661 aa10.39□□□□□ -0.75
CHD1-205ENST00000508756 KCNA6P17658 529 aa10.39□□□□□ -0.75
CHD1-205ENST00000508756 KRT15P19012 456 aa10.39□□□□□ -0.75
CHD1-205ENST00000508756 SDSP20132 328 aa10.39□□□□□ -0.75
CHD1-205ENST00000508756 FAM47CQ5HY64 1035 aa10.39□□□□□ -0.75
CHD1-205ENST00000508756 ARHGAP36Q6ZRI8 547 aa10.39□□□□□ -0.75
CHD1-205ENST00000508756 OSTM1Q86WC4 334 aa10.39□□□□□ -0.75
CHD1-205ENST00000508756 SYNPOQ8N3V7 929 aa10.39□□□□□ -0.75
CHD1-205ENST00000508756 IRF2BPLQ9H1B7 796 aa10.39□□□□□ -0.75
CHD1-205ENST00000508756 DTLQ9NZJ0 730 aa10.39□□□□□ -0.75
CHD1-205ENST00000508756 TLDC2A0PJX2 215 aa10.38□□□□□ -0.75
CHD1-205ENST00000508756 PLA2G1BP04054 148 aaKnown RBP10.38□□□□□ -0.75
CHD1-205ENST00000508756 AMY2AP04746 511 aa10.38□□□□□ -0.75
CHD1-205ENST00000508756 APPP05067 770 aa10.38□□□□□ -0.75
CHD1-205ENST00000508756 CYP2C8P10632 490 aa10.38□□□□□ -0.75
CHD1-205ENST00000508756 AMY2BP19961 511 aa10.38□□□□□ -0.75
CHD1-205ENST00000508756 JAM2P57087 298 aa10.38□□□□□ -0.75
CHD1-205ENST00000508756 ZNF460Q14592 562 aa10.38□□□□□ -0.75
CHD1-205ENST00000508756 GPR19Q15760 415 aa10.38□□□□□ -0.75
CHD1-205ENST00000508756 CR1LQ2VPA4 569 aa10.38□□□□□ -0.75
CHD1-205ENST00000508756 ZNF385BQ569K4 471 aa10.38□□□□□ -0.75
CHD1-205ENST00000508756 PTRH1Q86Y79 214 aaKnown RBP10.38□□□□□ -0.75
CHD1-205ENST00000508756 KRTAP1-3Q8IUG1 177 aa10.38□□□□□ -0.75
CHD1-205ENST00000508756 PWWP2AQ96N64 755 aa10.38□□□□□ -0.75
CHD1-205ENST00000508756 NOX5Q96PH1 765 aa10.38□□□□□ -0.75
CHD1-205ENST00000508756 TNPO3Q9Y5L0 923 aaKnown RBP10.38□□□□□ -0.75
CHD1-205ENST00000508756 RFPL3O75679 317 aa10.37□□□□□ -0.75
CHD1-205ENST00000508756 CFPP27918 469 aa10.37□□□□□ -0.75
CHD1-205ENST00000508756 CRY1Q16526 586 aa10.37□□□□□ -0.75
CHD1-205ENST00000508756 CIAPIN1Q6FI81 312 aa10.37□□□□□ -0.75
CHD1-205ENST00000508756 KCTD1Q719H9 257 aa10.37□□□□□ -0.75
CHD1-205ENST00000508756 C1QL4Q86Z23 238 aa10.37□□□□□ -0.75
CHD1-205ENST00000508756 TRIM48Q8IWZ4 208 aa10.37□□□□□ -0.75
CHD1-205ENST00000508756 LRRC56Q8IYG6 542 aaPredicted RBP10.37□□□□□ -0.75
CHD1-205ENST00000508756 TOE1Q96GM8 510 aaKnown RBP10.37□□□□□ -0.75
CHD1-205ENST00000508756 TOX2Q96NM4 488 aa10.37□□□□□ -0.75
CHD1-205ENST00000508756 TMA7Q9Y2S6 64 aaKnown RBP10.37□□□□□ -0.75
CHD1-205ENST00000508756 ZNF561-AS1K7EIQ3 104 aa10.36□□□□□ -0.75
CHD1-205ENST00000508756 MAN2B1O00754 1011 aa10.36□□□□□ -0.75
CHD1-205ENST00000508756 ENPP3O14638 875 aa10.36□□□□□ -0.75
CHD1-205ENST00000508756 KCNK3O14649 394 aa10.36□□□□□ -0.75
CHD1-205ENST00000508756 GSTA4O15217 222 aa10.36□□□□□ -0.75
CHD1-205ENST00000508756 LRG1P02750 347 aa10.36□□□□□ -0.75
CHD1-205ENST00000508756 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.36□□□□□ -0.75
CHD1-205ENST00000508756 ZC3H18Q86VM9 953 aaKnown RBP10.36□□□□□ -0.75
CHD1-205ENST00000508756 IGSF22Q8N9C0 903 aa10.36□□□□□ -0.75
CHD1-205ENST00000508756 CELF4Q9BZC1 486 aaKnown RBP10.36□□□□□ -0.75
CHD1-205ENST00000508756 SMURF1Q9HCE7 757 aa10.36□□□□□ -0.75
CHD1-205ENST00000508756 SRPK3Q9UPE1 567 aa10.36□□□□□ -0.75
CHD1-205ENST00000508756 PMF1-BGLAPU3KQ54 211 aa10.36□□□□□ -0.75
CHD1-205ENST00000508756 OPA1O60313 960 aa10.35□□□□□ -0.75
CHD1-205ENST00000508756 YBX3P16989 372 aaKnown RBP eCLIP10.35□□□□□ -0.75
CHD1-205ENST00000508756 IGFALSP35858 605 aa10.35□□□□□ -0.75
CHD1-205ENST00000508756 TEPPQ6URK8 271 aa10.35□□□□□ -0.75
CHD1-205ENST00000508756 STK32CQ86UX6 486 aa10.35□□□□□ -0.75
CHD1-205ENST00000508756 TTLL11Q8NHH1 800 aa10.35□□□□□ -0.75
CHD1-205ENST00000508756 DACT3Q96B18 629 aaPredicted RBP10.35□□□□□ -0.75
CHD1-205ENST00000508756 GORASP1Q9BQQ3 440 aa10.35□□□□□ -0.75
CHD1-205ENST00000508756 NUB1Q9Y5A7 615 aa10.35□□□□□ -0.75
CHD1-205ENST00000508756 EPHA5P54756 1037 aa10.34□□□□□ -0.75
CHD1-205ENST00000508756 NKX3-2P78367 333 aa10.34□□□□□ -0.75
CHD1-205ENST00000508756 FNIP1Q8TF40 1166 aa10.34□□□□□ -0.75
CHD1-205ENST00000508756 FEZ1Q99689 392 aa10.34□□□□□ -0.75
CHD1-205ENST00000508756 RBPJLQ9UBG7 517 aa10.34□□□□□ -0.75
CHD1-205ENST00000508756 ASLP04424 464 aa10.33□□□□□ -0.76
CHD1-205ENST00000508756 AFF3P51826 1226 aaKnown RBP10.33□□□□□ -0.76
CHD1-205ENST00000508756 HTRA3P83110 453 aa10.33□□□□□ -0.76
CHD1-205ENST00000508756 LACTBP83111 547 aaPredicted RBP10.33□□□□□ -0.76
CHD1-205ENST00000508756 SDE2Q6IQ49 451 aa10.33□□□□□ -0.76
CHD1-205ENST00000508756 ZCCHC8Q6NZY4 707 aaKnown RBP10.33□□□□□ -0.76
CHD1-205ENST00000508756 OVCH1Q7RTY7 1134 aa10.33□□□□□ -0.76
CHD1-205ENST00000508756 KIAA0907Q7Z7F0 614 aaPredicted RBP10.33□□□□□ -0.76
CHD1-205ENST00000508756 GLRX3O76003 335 aaKnown RBP10.32□□□□□ -0.76
CHD1-205ENST00000508756 SMAD4Q13485 552 aaKnown RBP10.32□□□□□ -0.76
CHD1-205ENST00000508756 PAN2Q504Q3 1202 aaKnown RBP10.32□□□□□ -0.76
CHD1-205ENST00000508756 TMEM177Q53S58 311 aa10.32□□□□□ -0.76
CHD1-205ENST00000508756 FIGNQ5HY92 759 aa10.32□□□□□ -0.76
CHD1-205ENST00000508756 FSTL4Q6MZW2 842 aa10.32□□□□□ -0.76
CHD1-205ENST00000508756 DHX37Q8IY37 1157 aaKnown RBP10.32□□□□□ -0.76
CHD1-205ENST00000508756 NINJ1Q92982 152 aa10.32□□□□□ -0.76
CHD1-205ENST00000508756 ZBTB8AQ96BR9 441 aa10.32□□□□□ -0.76
CHD1-205ENST00000508756 SAMD15Q9P1V8 674 aa10.32□□□□□ -0.76
CHD1-205ENST00000508756 WASF3Q9UPY6 502 aa10.32□□□□□ -0.76
CHD1-205ENST00000508756 ACOT7O00154 380 aa10.31□□□□□ -0.76
CHD1-205ENST00000508756 ITGA1P56199 1179 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms