RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 FIBPO43427 364 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 ARHGEF15O94989 841 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 PARNO95453 639 aaKnown RBP14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 CALM1P0DP23 149 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 CALM2P0DP24 149 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 CALM3P0DP25 149 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 WDR5P61964 334 aaKnown RBP14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 MBTPS1Q14703 1052 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 TCTN1Q2MV58 587 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 PCNX4Q63HM2 1172 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 CNKSR3Q6P9H4 555 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 TMTC3Q6ZXV5 915 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 SGMS1Q86VZ5 419 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 MICU3Q86XE3 530 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 HERC6Q8IVU3 1022 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 SMARCC2Q8TAQ2 1214 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 RTEL1Q9NZ71 1219 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 TELO2Q9Y4R8 837 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 SLC12A7Q9Y666 1083 aa14.99□□□□□ -0.01
HMGCS1-205ENST00000508319 H3BRB1 525 aa14.98□□□□□ -0.01
HMGCS1-205ENST00000508319 NOP56O00567 594 aaKnown RBP14.98□□□□□ -0.01
HMGCS1-205ENST00000508319 IGFBP4P22692 258 aa14.98□□□□□ -0.01
HMGCS1-205ENST00000508319 NEDD9Q14511 834 aa14.98□□□□□ -0.01
HMGCS1-205ENST00000508319 ZNF618Q5T7W0 954 aa14.98□□□□□ -0.01
HMGCS1-205ENST00000508319 XRRA1Q6P2D8 792 aa14.98□□□□□ -0.01
HMGCS1-205ENST00000508319 CYFIP1Q7L576 1253 aa14.98□□□□□ -0.01
HMGCS1-205ENST00000508319 SERINC5Q86VE9 423 aa14.98□□□□□ -0.01
HMGCS1-205ENST00000508319 PPM1EQ8WY54 764 aa14.98□□□□□ -0.01
HMGCS1-205ENST00000508319 CUL5Q93034 780 aa14.98□□□□□ -0.01
HMGCS1-205ENST00000508319 GPR20Q99678 358 aa14.98□□□□□ -0.01
HMGCS1-205ENST00000508319 TUT1Q9H6E5 874 aaKnown RBP14.98□□□□□ -0.01
HMGCS1-205ENST00000508319 CNTNAP5Q8WYK1 1306 aa14.97□□□□□ -0.01
HMGCS1-205ENST00000508319 hCG_1642624A0A1W2PR95 340 aa14.97□□□□□ -0.01
HMGCS1-205ENST00000508319 EPOPA6NHQ4 379 aa14.97□□□□□ -0.01
HMGCS1-205ENST00000508319 SMIM10L2AP0DMW4 78 aa14.97□□□□□ -0.01
HMGCS1-205ENST00000508319 SMIM10L2BP0DMW5 78 aa14.97□□□□□ -0.01
HMGCS1-205ENST00000508319 KCNJ6P48051 423 aa14.97□□□□□ -0.01
HMGCS1-205ENST00000508319 DEFB103AP81534 67 aa14.97□□□□□ -0.01
HMGCS1-205ENST00000508319 TAP1Q03518 808 aa14.97□□□□□ -0.01
HMGCS1-205ENST00000508319 APOA5Q6Q788 366 aa14.97□□□□□ -0.01
HMGCS1-205ENST00000508319 TMCO2Q7Z6W1 182 aaPredicted RBP14.97□□□□□ -0.01
HMGCS1-205ENST00000508319 TRIM50Q86XT4 487 aa14.97□□□□□ -0.01
HMGCS1-205ENST00000508319 FANCBQ8NB91 859 aa14.97□□□□□ -0.01
HMGCS1-205ENST00000508319 SENP7Q9BQF6 1050 aa14.97□□□□□ -0.01
HMGCS1-205ENST00000508319 USP26Q9BXU7 913 aa14.97□□□□□ -0.01
HMGCS1-205ENST00000508319 PSTPIP2Q9H939 334 aa14.97□□□□□ -0.01
HMGCS1-205ENST00000508319 BDP1A6H8Y1 2624 aa14.96□□□□□ -0.01
HMGCS1-205ENST00000508319 CCDC85BQ15834 202 aaPredicted RBP14.96□□□□□ -0.01
HMGCS1-205ENST00000508319 RNF20Q5VTR2 975 aa14.96□□□□□ -0.01
HMGCS1-205ENST00000508319 SPRED2Q7Z698 418 aa14.96□□□□□ -0.01
HMGCS1-205ENST00000508319 RASEFQ8IZ41 740 aa14.96□□□□□ -0.01
HMGCS1-205ENST00000508319 CCDC82Q8N4S0 544 aa14.96□□□□□ -0.01
HMGCS1-205ENST00000508319 ATP6V0A1Q93050 837 aa14.96□□□□□ -0.01
HMGCS1-205ENST00000508319 CERS4Q9HA82 394 aa14.96□□□□□ -0.01
HMGCS1-205ENST00000508319 THEGQ9P2T0 379 aa14.96□□□□□ -0.01
HMGCS1-205ENST00000508319 SIP14410 1827 aa14.96□□□□□ -0.01
HMGCS1-205ENST00000508319 C17orf102A2RUQ5 167 aa14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 LCHNA4D1U4 455 aa14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 TREHO43280 583 aa14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 KCNA2P16389 499 aa14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 ITGB5P18084 799 aa14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 THPOP40225 353 aa14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 SP4Q02446 784 aa14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 MKRN4PQ13434 485 aaPredicted RBP14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 UBE2SQ16763 222 aa14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 ADCK5Q3MIX3 580 aa14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 TJAP1Q5JTD0 557 aa14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 NLRX1Q86UT6 975 aa14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 GPRASP2Q96D09 838 aa14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 TCEANC2Q96MN5 208 aa14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 RNPEPQ9H4A4 650 aa14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 KAT6AQ92794 2004 aa14.95□□□□□ -0.02
HMGCS1-205ENST00000508319 EMSYQ7Z589 1322 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 ABHD14A-ACY1A0A1B0GW23 586 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 KIF28PB7ZC32 967 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 RFXAPO00287 272 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 TLL1O43897 1013 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 ATP9AO75110 1047 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 CDC45O75419 566 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 LGR5O75473 907 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 POU3F3P20264 500 aaPredicted RBP14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 ADAM17P78536 824 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 EXOSC10Q01780 885 aaKnown RBP14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 FUT2Q10981 343 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 TSGA10IPQ3SY00 556 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 WWC2Q6AWC2 1192 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 TYW1BQ6NUM6 668 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 HEATR3Q7Z4Q2 680 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 ARNTL2Q8WYA1 636 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 SYMPKQ92797 1274 aaKnown RBP14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 NEK1Q96PY6 1258 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 ZNF215Q9UL58 517 aaPredicted RBP14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 BRPF3Q9ULD4 1205 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 BRWD1Q9NSI6 2320 aa14.94□□□□□ -0.02
HMGCS1-205ENST00000508319 RSPH10B2B2RC85 870 aa14.93□□□□□ -0.02
HMGCS1-205ENST00000508319 EFCAB14O75071 495 aa14.93□□□□□ -0.02
HMGCS1-205ENST00000508319 CAND2O75155 1236 aa14.93□□□□□ -0.02
HMGCS1-205ENST00000508319 GJB5O95377 273 aa14.93□□□□□ -0.02
HMGCS1-205ENST00000508319 RSPH10BP0C881 870 aa14.93□□□□□ -0.02
HMGCS1-205ENST00000508319 DHX32Q7L7V1 743 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms