RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 GTF2IRD1Q9UHL9 959 aa22.7■■□□□ 1.22
SFXN1-209ENST00000508290 ZNF286BP0CG31 522 aa22.69■■□□□ 1.22
SFXN1-209ENST00000508290 KCNA2P16389 499 aa22.69■■□□□ 1.22
SFXN1-209ENST00000508290 RFC2P35250 354 aa22.69■■□□□ 1.22
SFXN1-209ENST00000508290 SHHQ15465 462 aa22.69■■□□□ 1.22
SFXN1-209ENST00000508290 PTGISQ16647 500 aa22.69■■□□□ 1.22
SFXN1-209ENST00000508290 GALNT17Q6IS24 598 aa22.69■■□□□ 1.22
SFXN1-209ENST00000508290 GPR20Q99678 358 aa22.69■■□□□ 1.22
SFXN1-209ENST00000508290 C16orf70Q9BSU1 422 aa22.69■■□□□ 1.22
SFXN1-209ENST00000508290 H3BRB1 525 aa22.68■■□□□ 1.22
SFXN1-209ENST00000508290 PFKFB2O60825 505 aa22.68■■□□□ 1.22
SFXN1-209ENST00000508290 PARNO95453 639 aaKnown RBP22.68■■□□□ 1.22
SFXN1-209ENST00000508290 LGALS2P05162 132 aa22.68■■□□□ 1.22
SFXN1-209ENST00000508290 CYP3A4P08684 503 aa22.68■■□□□ 1.22
SFXN1-209ENST00000508290 CYP2C18P33260 490 aa22.68■■□□□ 1.22
SFXN1-209ENST00000508290 ARHGAP4P98171 946 aa22.68■■□□□ 1.22
SFXN1-209ENST00000508290 RETREG2Q8NC44 543 aa22.68■■□□□ 1.22
SFXN1-209ENST00000508290 RNPC3Q96LT9 517 aaKnown RBP22.68■■□□□ 1.22
SFXN1-209ENST00000508290 TUT1Q9H6E5 874 aaKnown RBP22.68■■□□□ 1.22
SFXN1-209ENST00000508290 IL23AQ9NPF7 189 aa22.68■■□□□ 1.22
SFXN1-209ENST00000508290 KCNH7Q9NS40 1196 aa22.68■■□□□ 1.22
SFXN1-209ENST00000508290 NFASCO94856 1347 aa22.67■■□□□ 1.22
SFXN1-209ENST00000508290 STK36Q9NRP7 1315 aa22.67■■□□□ 1.22
SFXN1-209ENST00000508290 CSF2RAP15509 400 aa22.67■■□□□ 1.22
SFXN1-209ENST00000508290 XBP1P17861 261 aa22.67■■□□□ 1.22
SFXN1-209ENST00000508290 ZNF76P36508 570 aa22.67■■□□□ 1.22
SFXN1-209ENST00000508290 CHMP4BP1P59074 171 aa22.67■■□□□ 1.22
SFXN1-209ENST00000508290 SETQ01105 290 aaPredicted RBP22.67■■□□□ 1.22
SFXN1-209ENST00000508290 IL27Q8NEV9 243 aa22.67■■□□□ 1.22
SFXN1-209ENST00000508290 AFAP1L1Q8TED9 768 aa22.67■■□□□ 1.22
SFXN1-209ENST00000508290 SDF4Q9BRK5 362 aa22.67■■□□□ 1.22
SFXN1-209ENST00000508290 MEIS1O00470 390 aa22.66■■□□□ 1.22
SFXN1-209ENST00000508290 GNAT1P11488 350 aa22.66■■□□□ 1.22
SFXN1-209ENST00000508290 AK2P54819 239 aa22.66■■□□□ 1.22
SFXN1-209ENST00000508290 NLRP5P59047 1200 aa22.66■■□□□ 1.22
SFXN1-209ENST00000508290 RBL2Q08999 1139 aa22.66■■□□□ 1.22
SFXN1-209ENST00000508290 STK3Q13188 491 aa22.66■■□□□ 1.22
SFXN1-209ENST00000508290 C9orf50Q5SZB4 431 aa22.66■■□□□ 1.22
SFXN1-209ENST00000508290 JAKMIP3Q5VZ66 844 aa22.66■■□□□ 1.22
SFXN1-209ENST00000508290 CRYGNQ8WXF5 182 aa22.66■■□□□ 1.22
SFXN1-209ENST00000508290 SEPT1Q8WYJ6 367 aa22.66■■□□□ 1.22
SFXN1-209ENST00000508290 WASF1Q92558 559 aa22.66■■□□□ 1.22
SFXN1-209ENST00000508290 ALG1Q9BT22 464 aa22.66■■□□□ 1.22
SFXN1-209ENST00000508290 JPH1Q9HDC5 661 aaPredicted RBP22.66■■□□□ 1.22
SFXN1-209ENST00000508290 TMEM260Q9NX78 707 aa22.66■■□□□ 1.22
SFXN1-209ENST00000508290 HDAC6Q9UBN7 1215 aa22.66■■□□□ 1.22
SFXN1-209ENST00000508290 TPCN1Q9ULQ1 816 aa22.66■■□□□ 1.22
SFXN1-209ENST00000508290 CYP2C9P11712 490 aa22.65■■□□□ 1.22
SFXN1-209ENST00000508290 EPHB4P54760 987 aa22.65■■□□□ 1.22
SFXN1-209ENST00000508290 SMAD3P84022 425 aaKnown RBP22.65■■□□□ 1.22
SFXN1-209ENST00000508290 SCRN1Q12765 414 aa22.65■■□□□ 1.22
SFXN1-209ENST00000508290 PTK7Q13308 1070 aa22.65■■□□□ 1.22
SFXN1-209ENST00000508290 GDF6Q6KF10 455 aaPredicted RBP22.65■■□□□ 1.22
SFXN1-209ENST00000508290 TNPO1Q92973 898 aaKnown RBP22.65■■□□□ 1.22
SFXN1-209ENST00000508290 WNT8AQ9H1J5 351 aa22.65■■□□□ 1.22
SFXN1-209ENST00000508290 VPS54Q9P1Q0 977 aa22.65■■□□□ 1.22
SFXN1-209ENST00000508290 SOX1O00570 391 aaPredicted RBP22.64■■□□□ 1.21
SFXN1-209ENST00000508290 SORBS3O60504 671 aa22.64■■□□□ 1.21
SFXN1-209ENST00000508290 ATP9AO75110 1047 aa22.64■■□□□ 1.21
SFXN1-209ENST00000508290 NEK4P51957 841 aa22.64■■□□□ 1.21
SFXN1-209ENST00000508290 DAGLBQ8NCG7 672 aa22.64■■□□□ 1.21
SFXN1-209ENST00000508290 PGBD1Q96JS3 809 aa22.64■■□□□ 1.21
SFXN1-209ENST00000508290 PCDH10Q9P2E7 1040 aa22.64■■□□□ 1.21
SFXN1-209ENST00000508290 PCDHA4Q9UN74 947 aa22.64■■□□□ 1.21
SFXN1-209ENST00000508290 SEC24BO95487 1268 aa22.63■■□□□ 1.21
SFXN1-209ENST00000508290 HOXC8P31273 242 aa22.63■■□□□ 1.21
SFXN1-209ENST00000508290 TCF7P36402 384 aaPredicted RBP22.63■■□□□ 1.21
SFXN1-209ENST00000508290 CCL23P55773 120 aa22.63■■□□□ 1.21
SFXN1-209ENST00000508290 C8orf34Q49A92 452 aa22.63■■□□□ 1.21
SFXN1-209ENST00000508290 TMEM240Q5SV17 173 aa22.63■■□□□ 1.21
SFXN1-209ENST00000508290 FAM109BQ6ICB4 259 aaPredicted RBP22.63■■□□□ 1.21
SFXN1-209ENST00000508290 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.63■■□□□ 1.213e-7■□□□□ 8
SFXN1-209ENST00000508290 LARP6Q9BRS8 491 aaKnown RBP22.63■■□□□ 1.21
SFXN1-209ENST00000508290 SMARCAD1Q9H4L7 1026 aa22.63■■□□□ 1.21
SFXN1-209ENST00000508290 AGO4Q9HCK5 861 aaKnown RBP22.63■■□□□ 1.21
SFXN1-209ENST00000508290 ERAP1Q9NZ08 941 aa22.63■■□□□ 1.21
SFXN1-209ENST00000508290 SLC9A2Q9UBY0 812 aa22.63■■□□□ 1.21
SFXN1-209ENST00000508290 UMODL1Q5DID0 1318 aa22.62■■□□□ 1.21
SFXN1-209ENST00000508290 EMSYQ7Z589 1322 aa22.62■■□□□ 1.21
SFXN1-209ENST00000508290 C17orf102A2RUQ5 167 aa22.62■■□□□ 1.21
SFXN1-209ENST00000508290 FGBP02675 491 aa22.62■■□□□ 1.21
SFXN1-209ENST00000508290 CIITAP33076 1130 aa22.62■■□□□ 1.21
SFXN1-209ENST00000508290 USP11P51784 963 aa22.62■■□□□ 1.21
SFXN1-209ENST00000508290 RASIP1Q5U651 963 aa22.62■■□□□ 1.21
SFXN1-209ENST00000508290 HERVK_113Q902F9 699 aa22.62■■□□□ 1.21
SFXN1-209ENST00000508290 LRCH3Q96II8 777 aa22.62■■□□□ 1.21
SFXN1-209ENST00000508290 BCAS3Q9H6U6 928 aa22.62■■□□□ 1.21
SFXN1-209ENST00000508290 NRCAMQ92823 1304 aa22.61■■□□□ 1.21
SFXN1-209ENST00000508290 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.61■■□□□ 1.21
SFXN1-209ENST00000508290 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.61■■□□□ 1.21
SFXN1-209ENST00000508290 CAND2O75155 1236 aa22.61■■□□□ 1.21
SFXN1-209ENST00000508290 IQCF3P0C7M6 154 aa22.61■■□□□ 1.21
SFXN1-209ENST00000508290 SELPP16109 830 aa22.61■■□□□ 1.21
SFXN1-209ENST00000508290 SLC26A2P50443 739 aa22.61■■□□□ 1.21
SFXN1-209ENST00000508290 SP4Q02446 784 aa22.61■■□□□ 1.21
SFXN1-209ENST00000508290 ZNF365Q70YC5 407 aa22.61■■□□□ 1.21
SFXN1-209ENST00000508290 C16orf59Q7L2K0 433 aa22.61■■□□□ 1.21
SFXN1-209ENST00000508290 PLA2G4DQ86XP0 818 aa22.61■■□□□ 1.21
SFXN1-209ENST00000508290 BLIDQ8IZY5 108 aa22.61■■□□□ 1.21
SFXN1-209ENST00000508290 GTF3C6Q969F1 213 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms