RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 WTAPQ15007 396 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 PPP2R5BQ15173 497 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 NECTIN1Q15223 517 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 STXBP2Q15833 593 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 MSS51Q4VC12 460 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 BRDTQ58F21 947 aaPredicted RBP9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 TMEM67Q5HYA8 995 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 DESI1Q6ICB0 168 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 CATIPQ7Z7H3 387 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 DEFB123Q8N688 67 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 LRRN4Q8WUT4 740 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 TAAR1Q96RJ0 339 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 RMDN3Q96TC7 470 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 SENP2Q9HC62 589 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 MTMR10Q9NXD2 777 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 COL20A1Q9P218 1284 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 PCDHA1Q9Y5I3 950 aa9.23□□□□□ -0.93
UBE2D3-222ENST00000508238 CYTH3O43739 400 aa9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 DDAH1O94760 285 aa9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 NR3C2P08235 984 aa9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 TXNP10599 105 aaKnown RBP9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 JUNDP17535 347 aa9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 MCM5P33992 734 aa9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 LIFRP42702 1097 aa9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 C16orf59Q7L2K0 433 aa9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 CHST3Q7LGC8 479 aa9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 TMEM87BQ96K49 555 aa9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 LZTS2Q9BRK4 669 aa9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 MTG1Q9BT17 334 aaPredicted RBP9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 LY9Q9HBG7 655 aa9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 PRDM9Q9NQV7 894 aa9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 MYH7BA7E2Y1 1941 aa9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 TRIP12Q14669 1992 aaPredicted RBP9.22□□□□□ -0.93
UBE2D3-222ENST00000508238 SLC27A2O14975 620 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 ARIH2O95376 493 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 CFBP00751 764 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 SUPT20HL2P0C7V6 817 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 KIF5BP33176 963 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 KCNC4Q03721 635 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 PTPN11Q06124 597 aaPredicted RBP9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 PPIGQ13427 754 aaKnown RBP eCLIP9.21□□□□□ -0.945e-7■□□□□ 10
UBE2D3-222ENST00000508238 TSGA10IPQ3SY00 556 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 RASIP1Q5U651 963 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 ARHGEF16Q5VV41 709 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 CREB3L3Q68CJ9 461 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 NFRKBQ6P4R8 1299 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 KCNV1Q6PIU1 500 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 LYPD8Q6UX82 237 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 VSIG10LQ86VR7 867 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 TMEM199Q8N511 208 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 OR6J1Q8NGC5 347 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 EMID1Q96A84 441 aaPredicted RBP9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 PIGSQ96S52 555 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 NOC4LQ9BVI4 516 aaKnown RBP9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 SPZ1Q9BXG8 430 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 ZMYND15Q9H091 742 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 ALDH8A1Q9H2A2 487 aaPredicted RBP9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 PXMP2Q9NR77 195 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 DDX41Q9UJV9 622 aaKnown RBP9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 STXBP5LQ9Y2K9 1186 aa9.21□□□□□ -0.94
UBE2D3-222ENST00000508238 TET1Q8NFU7 2136 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 TMEM265A0A087WTH1 108 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 GCOM1H8Y6P7 765 aaPredicted RBP9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 SH2B2O14492 632 aaPredicted RBP9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 PRC1O43663 620 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 B4GALT4O60513 344 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 RGS20O76081 388 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 GH1P01241 217 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 POLR2MP0CAP2 368 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 TGFB3P10600 412 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 CSF2RAP15509 400 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 EIF2AK2P19525 551 aaKnown RBP9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 GNAQP50148 359 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 PSMC6P62333 389 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 ARHGAP1Q07960 439 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 TMEM240Q5SV17 173 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 RNF20Q5VTR2 975 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 CASC1Q6TDU7 716 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 SEPT14Q6ZU15 432 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 Q7L0L9 218 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 SGMS1Q86VZ5 419 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 ZNF654Q8IZM8 581 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 CTCFLQ8NI51 663 aaPredicted RBP9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 COPS5Q92905 334 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 RNPC3Q96LT9 517 aaKnown RBP9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 PDCD2LQ9BRP1 358 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 SLC6A16Q9GZN6 736 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 TRPV6Q9H1D0 765 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 HIPK3Q9H422 1215 aa9.2□□□□□ -0.94
UBE2D3-222ENST00000508238 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 PIK3CDO00329 1044 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 DXOO77932 396 aaKnown RBP9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 MYL3P08590 195 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 CALM1P0DP23 149 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 CALM2P0DP24 149 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 CALM3P0DP25 149 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 HOXD8P13378 290 aaPredicted RBP9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 HOXA13P31271 388 aaPredicted RBP9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 CYP2C18P33260 490 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms