RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 POTEGQ6S5H5 508 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 POTEEQ6S8J3 1075 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 SH3BP5LQ7L8J4 393 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 SCFD1Q8WVM8 642 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 IQCDQ96DY2 449 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 CCDC17Q96LX7 622 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 ANO3Q9BYT9 981 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 TSGA10Q9BZW7 698 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 NT5C3AQ9H0P0 336 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 GBP3Q9H0R5 595 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 ZHX3Q9H4I2 956 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 JRKLQ9Y4A0 524 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 MEIS1O00470 390 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 TUBBP07437 444 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 MYBL2P10244 700 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 NPR1P16066 1061 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 CYP11B2P19099 503 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 MAGEA1P43355 309 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 MRPS25P82663 173 aaKnown RBP12.08□□□□□ -0.48
LIN54-207ENST00000508171 RASSF7Q02833 373 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 ASTE1Q2TB18 679 aaPredicted RBP12.08□□□□□ -0.48
LIN54-207ENST00000508171 PDXDC1Q6P996 788 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 GSPT2Q8IYD1 628 aaKnown RBP12.08□□□□□ -0.48
LIN54-207ENST00000508171 TRIM58Q8NG06 486 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 CCDC102AQ96A19 550 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 POLD4Q9HCU8 107 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 SMARCAL1Q9NZC9 954 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 FAM198AQ9UFP1 575 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 TRPC5Q9UL62 973 aaPredicted RBP12.08□□□□□ -0.48
LIN54-207ENST00000508171 SNX12Q9UMY4 172 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 FAN1Q9Y2M0 1017 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 CCDC66A2RUB6 948 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 TLR2O60603 784 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 TACC1O75410 805 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 USP11P51784 963 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 CKAP4Q07065 602 aaKnown RBP12.08□□□□□ -0.48
LIN54-207ENST00000508171 USH1GQ495M9 461 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 PRR16Q569H4 304 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 NFRKBQ6P4R8 1299 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 COL23A1Q86Y22 540 aaPredicted RBP12.08□□□□□ -0.48
LIN54-207ENST00000508171 MKL1Q969V6 931 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 ZDHHC15Q96MV8 337 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 EHD4Q9H223 541 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 KCTD10Q9H3F6 313 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 EMILIN3Q9NT22 766 aa12.08□□□□□ -0.48
LIN54-207ENST00000508171 SCN9AQ15858 1988 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 NCK2O43639 380 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 BUB1O43683 1085 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 EIF3JO75822 258 aaKnown RBP12.07□□□□□ -0.48
LIN54-207ENST00000508171 GDF11O95390 407 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 ALDH1B1P30837 517 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 CASP5P51878 434 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 POLR2FP61218 127 aaKnown RBP12.07□□□□□ -0.48
LIN54-207ENST00000508171 GPS2Q13227 327 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 EZH2Q15910 746 aaKnown RBP12.07□□□□□ -0.48
LIN54-207ENST00000508171 TDRD12Q587J7 1177 aaKnown RBP12.07□□□□□ -0.48
LIN54-207ENST00000508171 FAM83BQ5T0W9 1011 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 CATSPER3Q86XQ3 398 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 CCDC65Q8IXS2 484 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 HDAC7Q8WUI4 952 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 QTRT2Q9H974 415 aaKnown RBP12.07□□□□□ -0.48
LIN54-207ENST00000508171 EHD2Q9NZN4 543 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 KDM3AQ9Y4C1 1321 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 F5H6K3 240 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 LMAN1P49257 510 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 SLC12A3P55017 1021 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 JAG1P78504 1218 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 ARHGAP4P98171 946 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 KLRC3Q07444 240 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 SPIRE1Q08AE8 756 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 MSL3Q8N5Y2 521 aaKnown RBP12.07□□□□□ -0.48
LIN54-207ENST00000508171 ZNF622Q969S3 477 aaKnown RBP eCLIP12.07□□□□□ -0.48
LIN54-207ENST00000508171 RPGRIP1Q96KN7 1286 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 BCAS3Q9H6U6 928 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
LIN54-207ENST00000508171 PI4KBQ9UBF8 816 aa12.07□□□□□ -0.48
LIN54-207ENST00000508171 CYP3A7-CYP3A51PA0A087WV96 503 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 KRT18P05783 430 aaKnown RBP12.06□□□□□ -0.48
LIN54-207ENST00000508171 CYP3A7P24462 503 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 MATR3P43243 847 aaKnown RBP eCLIP12.06□□□□□ -0.488e-6■□□□□ 9.7
LIN54-207ENST00000508171 TNNT3P45378 269 aaPredicted RBP12.06□□□□□ -0.48
LIN54-207ENST00000508171 ARID5AQ03989 594 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 ADAM9Q13443 819 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 ENOX2Q16206 610 aaKnown RBP12.06□□□□□ -0.48
LIN54-207ENST00000508171 CRYGNQ8WXF5 182 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 EXOC4Q96A65 974 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 OSBPL9Q96SU4 736 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 LSM14BQ9BX40 385 aaKnown RBP12.06□□□□□ -0.48
LIN54-207ENST00000508171 NYAP2Q9P242 653 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.06□□□□□ -0.48
LIN54-207ENST00000508171 NRXN2Q9P2S2 1712 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 TARSL2A2RTX5 802 aaKnown RBP12.06□□□□□ -0.48
LIN54-207ENST00000508171 FAM86B1E9PN63 330 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 FAM86B2P0C5J1 330 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 PABPC4Q13310 644 aaKnown RBP eCLIP12.06□□□□□ -0.48
LIN54-207ENST00000508171 FOXR2Q6PJQ5 311 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 TRIM59Q8IWR1 403 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 NLGN1Q8N2Q7 840 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 CYP2W1Q8TAV3 490 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 ETNPPLQ8TBG4 499 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms