RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 DDR1Q08345 913 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 KCNH2Q12809 1159 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 PSMD2Q13200 908 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 BIRC3Q13489 604 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 MTMR3Q13615 1198 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 CUL1Q13616 776 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 UBE4AQ14139 1066 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 SEPT2Q15019 361 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 NPY5RQ15761 445 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 CLUL1Q15846 466 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 HLFQ16534 295 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 TMEM266Q2M3C6 531 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 SLC9C1Q4G0N8 1177 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 VWA3BQ502W6 1294 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 SBK1Q52WX2 424 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 EARS2Q5JPH6 523 aaKnown RBP5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 SPTY2D1Q68D10 685 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 PPP4R3AQ6IN85 833 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 RUFY4Q6ZNE9 571 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 CACNA2D4Q7Z3S7 1137 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 CABP7Q86V35 215 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 DGKHQ86XP1 1220 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 CERS3Q8IU89 383 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 SRBD1Q8N5C6 995 aaKnown RBP5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 C4orf32Q8N8J7 132 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 MIGA1Q8NAN2 632 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 PRPF38AQ8NAV1 312 aaKnown RBP5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 ANKS1AQ92625 1134 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 TAF4BQ92750 862 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 STAMQ92783 540 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 DRC1Q96MC2 740 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 DUSP9Q99956 384 aaKnown RBP5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 RIOK1Q9BRS2 568 aaKnown RBP5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 LACRTQ9GZZ8 138 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 EPN3Q9H201 632 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 ZNF287Q9HBT7 754 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 RIC8AQ9NPQ8 531 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 GDF3Q9NR23 364 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 TRIM10Q9UDY6 481 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 LRWD1Q9UFC0 647 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 ZNF804BA4D1E1 1349 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 DLEC1Q9Y238 1755 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 COL5A2P05997 1499 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 TRIM49BA6NDI0 452 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 TSPY2A6NKD2 308 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 CFAP99D6REC4 459 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 RBAK-RBAKDNI3L0D1 243 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 hCG_1984214I3L0E3 225 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 PDE2AO00408 941 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 KIF1CO43896 1103 aaKnown RBP5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 LILRB3O75022 631 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 SERPING1P05155 500 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 SMARCA1P28370 1054 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 CTHP32929 405 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 MAP2K2P36507 400 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 EIF4A3P38919 411 aaKnown RBP5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 NAP1L1P55209 391 aaKnown RBP5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 CHRNDQ07001 517 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 IFFO1Q0D2I5 559 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 GRM4Q14833 912 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 NONOQ15233 471 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 IL17AQ16552 155 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 RC3H1Q5TC82 1133 aaKnown RBP5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 SOGA3Q5TF21 947 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 HAUS3Q68CZ6 603 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 CENPPQ6IPU0 288 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 PTCRAQ6ISU1 281 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 PDXDC1Q6P996 788 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 LYPD8Q6UX82 237 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 CCDC121Q6ZUS5 278 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 SV2BQ7L1I2 683 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 CROCCP2Q86T23 111 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 C2CD5Q86YS7 1000 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 GUF1Q8N442 669 aaKnown RBP5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 ZNF713Q8N859 430 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 HELBQ8NG08 1087 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 SDR42E1Q8WUS8 393 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 LMBR1Q8WVP7 490 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 PIGBQ92521 554 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 CDK5RAP3Q96JB5 506 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 PBKQ96KB5 322 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 ATP6V1G3Q96LB4 118 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 LRRC1Q9BTT6 524 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 TRIM9Q9C026 710 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 FAM117AQ9C073 453 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 NDST4Q9H3R1 872 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 C6orf50Q9HD87 102 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 AGPAT5Q9NUQ2 364 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 CEP72Q9P209 647 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 ABCF2Q9UG63 623 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 SWAP70Q9UH65 585 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 MAPK8IP1Q9UQF2 711 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 ZNF652Q9Y2D9 606 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 BZW2Q9Y6E2 419 aaKnown RBP5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 GRIN2DO15399 1336 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 ATP8B3O60423 1300 aa5.47□□□□□ -1.53
HMGB3P16-201ENST00000508037 MYH8P13535 1937 aa5.46□□□□□ -1.53
HMGB3P16-201ENST00000508037 MYH2Q9UKX2 1941 aa5.46□□□□□ -1.53
HMGB3P16-201ENST00000508037 BTNL10A8MVZ5 291 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 USP17L12C9JPN9 530 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms