RNA–Protein interactions for RNA: ENST00000507905.6

SMN1-206, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 431 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-206ENST00000507905 WRNIP1Q96S55 665 aa8.17□□□□□ -1.1
SMN1-206ENST00000507905 AARSD1Q9BTE6 412 aaKnown RBP8.17□□□□□ -1.1
SMN1-206ENST00000507905 ASH2LQ9UBL3 628 aa8.17□□□□□ -1.1
SMN1-206ENST00000507905 SLC27A2O14975 620 aa8.16□□□□□ -1.1
SMN1-206ENST00000507905 PRODHO43272 600 aa8.16□□□□□ -1.1
SMN1-206ENST00000507905 ADAM17P78536 824 aa8.16□□□□□ -1.1
SMN1-206ENST00000507905 GLB1LQ6UWU2 654 aa8.16□□□□□ -1.1
SMN1-206ENST00000507905 TMC5Q6UXY8 1006 aa8.16□□□□□ -1.1
SMN1-206ENST00000507905 DCAF4Q8WV16 495 aa8.16□□□□□ -1.1
SMN1-206ENST00000507905 YTHDC1Q96MU7 727 aaKnown RBP8.16□□□□□ -1.1
SMN1-206ENST00000507905 HSPBP1Q9NZL4 362 aa8.16□□□□□ -1.1
SMN1-206ENST00000507905 PPARGC1AQ9UBK2 798 aaKnown RBP8.16□□□□□ -1.1
SMN1-206ENST00000507905 WASF3Q9UPY6 502 aa8.16□□□□□ -1.1
SMN1-206ENST00000507905 B4GALT3O60512 393 aa8.15□□□□□ -1.1
SMN1-206ENST00000507905 NSMFQ6X4W1 530 aa8.15□□□□□ -1.1
SMN1-206ENST00000507905 PLEKHH3Q7Z736 793 aa8.15□□□□□ -1.1
SMN1-206ENST00000507905 ST13P5Q8NFI4 369 aaPredicted RBP8.15□□□□□ -1.1
SMN1-206ENST00000507905 FTSJ1Q9UET6 329 aa8.15□□□□□ -1.1
SMN1-206ENST00000507905 FGFR1P11362 822 aa8.14□□□□□ -1.11
SMN1-206ENST00000507905 GRIN1Q05586 938 aa8.14□□□□□ -1.11
SMN1-206ENST00000507905 CPZQ66K79 652 aa8.14□□□□□ -1.11
SMN1-206ENST00000507905 KCNT2Q6UVM3 1135 aa8.14□□□□□ -1.11
SMN1-206ENST00000507905 LBX2Q6XYB7 198 aa8.14□□□□□ -1.11
SMN1-206ENST00000507905 OTOP3Q7RTS5 596 aa8.14□□□□□ -1.11
SMN1-206ENST00000507905 TTC9BQ8N6N2 239 aa8.14□□□□□ -1.11
SMN1-206ENST00000507905 CHST13Q8NET6 341 aa8.14□□□□□ -1.11
SMN1-206ENST00000507905 TTLL11Q8NHH1 800 aa8.14□□□□□ -1.11
SMN1-206ENST00000507905 CLEC4DQ8WXI8 215 aa8.14□□□□□ -1.11
SMN1-206ENST00000507905 C8orf49Q96NF6 230 aa8.14□□□□□ -1.11
SMN1-206ENST00000507905 NUB1Q9Y5A7 615 aa8.14□□□□□ -1.11
SMN1-206ENST00000507905 LAMTOR5O43504 91 aa8.13□□□□□ -1.11
SMN1-206ENST00000507905 PABPC1P11940 636 aaKnown RBP8.13□□□□□ -1.11
SMN1-206ENST00000507905 COL6A2P12110 1019 aa8.13□□□□□ -1.11
SMN1-206ENST00000507905 GRK2P25098 689 aa8.13□□□□□ -1.11
SMN1-206ENST00000507905 GRK3P35626 688 aa8.13□□□□□ -1.11
SMN1-206ENST00000507905 SPIRE1Q08AE8 756 aa8.13□□□□□ -1.11
SMN1-206ENST00000507905 RAB33AQ14088 237 aa8.13□□□□□ -1.11
SMN1-206ENST00000507905 KIZQ2M2Z5 673 aa8.13□□□□□ -1.11
SMN1-206ENST00000507905 TRMT10BQ6PF06 316 aaKnown RBP8.13□□□□□ -1.11
SMN1-206ENST00000507905 LIMS2Q7Z4I7 341 aa8.13□□□□□ -1.11
SMN1-206ENST00000507905 ZCCHC14Q8WYQ9 949 aaKnown RBP8.13□□□□□ -1.11
SMN1-206ENST00000507905 KCNJ15Q99712 375 aa8.13□□□□□ -1.11
SMN1-206ENST00000507905 ZFYVE21Q9BQ24 234 aa8.13□□□□□ -1.11
SMN1-206ENST00000507905 SSBP3Q9BWW4 388 aaPredicted RBP8.13□□□□□ -1.11
SMN1-206ENST00000507905 ARHGEF4Q9NR80 690 aa8.13□□□□□ -1.11
SMN1-206ENST00000507905 RBPJLQ9UBG7 517 aa8.13□□□□□ -1.11
SMN1-206ENST00000507905 GNAT1P11488 350 aa8.12□□□□□ -1.11
SMN1-206ENST00000507905 VASNQ6EMK4 673 aa8.12□□□□□ -1.11
SMN1-206ENST00000507905 RBM12BQ8IXT5 1001 aaKnown RBP8.12□□□□□ -1.11
SMN1-206ENST00000507905 LRRC47Q8N1G4 583 aaKnown RBP8.12□□□□□ -1.11
SMN1-206ENST00000507905 OSBP2Q969R2 916 aa8.12□□□□□ -1.11
SMN1-206ENST00000507905 MBD6Q96DN6 1003 aa8.12□□□□□ -1.11
SMN1-206ENST00000507905 BARX1Q9HBU1 254 aaPredicted RBP8.12□□□□□ -1.11
SMN1-206ENST00000507905 ZDHHC9Q9Y397 364 aa8.12□□□□□ -1.11
SMN1-206ENST00000507905 TRAV20A0A0B4J274 112 aa8.11□□□□□ -1.11
SMN1-206ENST00000507905 RBM25P49756 843 aaKnown RBP8.11□□□□□ -1.11
SMN1-206ENST00000507905 IFRD2Q12894 506 aaPredicted RBP8.11□□□□□ -1.11
SMN1-206ENST00000507905 TUSC3Q13454 348 aa8.11□□□□□ -1.11
SMN1-206ENST00000507905 NTRK3Q16288 839 aa8.11□□□□□ -1.11
SMN1-206ENST00000507905 KBTBD2Q8IY47 623 aa8.11□□□□□ -1.11
SMN1-206ENST00000507905 IFNL3Q8IZI9 196 aa8.11□□□□□ -1.11
SMN1-206ENST00000507905 KLHL36Q8N4N3 616 aa8.11□□□□□ -1.11
SMN1-206ENST00000507905 C1QTNF3Q9BXJ4 246 aa8.11□□□□□ -1.11
SMN1-206ENST00000507905 TRIM55Q9BYV6 548 aa8.11□□□□□ -1.11
SMN1-206ENST00000507905 DLL4Q9NR61 685 aa8.11□□□□□ -1.11
SMN1-206ENST00000507905 NPEPPSL1A6NEC2 478 aa8.1□□□□□ -1.11
SMN1-206ENST00000507905 B4GALT4O60513 344 aa8.1□□□□□ -1.11
SMN1-206ENST00000507905 ZNF20P17024 532 aa8.1□□□□□ -1.11
SMN1-206ENST00000507905 GPR85P60893 370 aa8.1□□□□□ -1.11
SMN1-206ENST00000507905 PPP2CBP62714 309 aa8.1□□□□□ -1.11
SMN1-206ENST00000507905 PPP2CAP67775 309 aa8.1□□□□□ -1.11
SMN1-206ENST00000507905 NFATC3Q12968 1075 aa8.1□□□□□ -1.11
SMN1-206ENST00000507905 YOD1Q5VVQ6 348 aaPredicted RBP8.1□□□□□ -1.11
SMN1-206ENST00000507905 STYK1Q6J9G0 422 aa8.1□□□□□ -1.11
SMN1-206ENST00000507905 PKN3Q6P5Z2 889 aa8.1□□□□□ -1.11
SMN1-206ENST00000507905 DPH6Q7L8W6 267 aa8.1□□□□□ -1.11
SMN1-206ENST00000507905 PROSER1Q86XN7 944 aa8.1□□□□□ -1.11
SMN1-206ENST00000507905 UHMK1Q8TAS1 419 aaKnown RBP8.1□□□□□ -1.11
SMN1-206ENST00000507905 TMPRSS5Q9H3S3 457 aa8.1□□□□□ -1.11
SMN1-206ENST00000507905 PPP4R1LQ9P1A2 415 aa8.1□□□□□ -1.11
SMN1-206ENST00000507905 BLACEA4D250 179 aa8.09□□□□□ -1.11
SMN1-206ENST00000507905 NKRFO15226 690 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMN1-206ENST00000507905 CKMP06732 381 aa8.09□□□□□ -1.11
SMN1-206ENST00000507905 FAHP16930 419 aa8.09□□□□□ -1.11
SMN1-206ENST00000507905 PAN2Q504Q3 1202 aaKnown RBP8.09□□□□□ -1.11
SMN1-206ENST00000507905 PHF19Q5T6S3 580 aa8.09□□□□□ -1.11
SMN1-206ENST00000507905 ARHGEF18Q6ZSZ5 1173 aa8.09□□□□□ -1.11
SMN1-206ENST00000507905 DTX3Q8N9I9 347 aa8.09□□□□□ -1.11
SMN1-206ENST00000507905 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMN1-206ENST00000507905 KRTAP3-1Q9BYR8 98 aa8.09□□□□□ -1.11
SMN1-206ENST00000507905 PDGFDQ9GZP0 370 aaPredicted RBP8.09□□□□□ -1.11
SMN1-206ENST00000507905 JADE2Q9NQC1 790 aa8.09□□□□□ -1.11
SMN1-206ENST00000507905 ST6GALNAC2Q9UJ37 374 aa8.09□□□□□ -1.11
SMN1-206ENST00000507905 DSEQ9UL01 958 aa8.09□□□□□ -1.11
SMN1-206ENST00000507905 FAM47E-STBD1D6RA91 191 aa8.08□□□□□ -1.12
SMN1-206ENST00000507905 LTFP02788 710 aa8.08□□□□□ -1.12
SMN1-206ENST00000507905 SOD2P04179 222 aa8.08□□□□□ -1.12
SMN1-206ENST00000507905 ENO2P09104 434 aaPredicted RBP8.08□□□□□ -1.12
SMN1-206ENST00000507905 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.08□□□□□ -1.12
SMN1-206ENST00000507905 IGDCC4Q8TDY8 1250 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms