RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 KCTD13Q8WZ19 329 aa7.5□□□□□ -1.21
LINC01088-203ENST00000507476 DVL3Q92997 716 aaPredicted RBP7.5□□□□□ -1.21
LINC01088-203ENST00000507476 IER2Q9BTL4 223 aa7.5□□□□□ -1.21
LINC01088-203ENST00000507476 JAM3Q9BX67 310 aa7.5□□□□□ -1.21
LINC01088-203ENST00000507476 GPR27Q9NS67 375 aa7.5□□□□□ -1.21
LINC01088-203ENST00000507476 HSPBP1Q9NZL4 362 aa7.5□□□□□ -1.21
LINC01088-203ENST00000507476 COL6A1P12109 1028 aa7.49□□□□□ -1.21
LINC01088-203ENST00000507476 CDSNQ15517 529 aa7.49□□□□□ -1.21
LINC01088-203ENST00000507476 CYP4F22Q6NT55 531 aa7.49□□□□□ -1.21
LINC01088-203ENST00000507476 PLEKHH3Q7Z736 793 aa7.49□□□□□ -1.21
LINC01088-203ENST00000507476 MCF2L2Q86YR7 1114 aa7.49□□□□□ -1.21
LINC01088-203ENST00000507476 PIP4K2CQ8TBX8 421 aa7.49□□□□□ -1.21
LINC01088-203ENST00000507476 IGDCC4Q8TDY8 1250 aa7.49□□□□□ -1.21
LINC01088-203ENST00000507476 TINF2Q9BSI4 451 aa7.49□□□□□ -1.21
LINC01088-203ENST00000507476 SLC6A20Q9NP91 592 aa7.49□□□□□ -1.21
LINC01088-203ENST00000507476 GPR42O15529 346 aa7.48□□□□□ -1.21
LINC01088-203ENST00000507476 AKAP8O43823 692 aaKnown RBP7.48□□□□□ -1.21
LINC01088-203ENST00000507476 GNL2Q13823 731 aaKnown RBP7.48□□□□□ -1.21
LINC01088-203ENST00000507476 KBTBD2Q8IY47 623 aa7.48□□□□□ -1.21
LINC01088-203ENST00000507476 TTLL11Q8NHH1 800 aa7.48□□□□□ -1.21
LINC01088-203ENST00000507476 HNRNPLLQ8WVV9 542 aaKnown RBP7.48□□□□□ -1.21
LINC01088-203ENST00000507476 WRNIP1Q96S55 665 aa7.48□□□□□ -1.21
LINC01088-203ENST00000507476 PHF20Q9BVI0 1012 aa7.48□□□□□ -1.21
LINC01088-203ENST00000507476 ST7Q9NRC1 585 aa7.48□□□□□ -1.21
LINC01088-203ENST00000507476 AGRPO00253 132 aa7.47□□□□□ -1.21
LINC01088-203ENST00000507476 KRIT1O00522 736 aa7.47□□□□□ -1.21
LINC01088-203ENST00000507476 SLC27A2O14975 620 aa7.47□□□□□ -1.21
LINC01088-203ENST00000507476 CYP7B1O75881 506 aa7.47□□□□□ -1.21
LINC01088-203ENST00000507476 EPHB4P54760 987 aa7.47□□□□□ -1.21
LINC01088-203ENST00000507476 GRIN1Q05586 938 aa7.47□□□□□ -1.21
LINC01088-203ENST00000507476 PHF19Q5T6S3 580 aa7.47□□□□□ -1.21
LINC01088-203ENST00000507476 USP53Q70EK8 1073 aa7.47□□□□□ -1.21
LINC01088-203ENST00000507476 RBM12BQ8IXT5 1001 aaKnown RBP7.47□□□□□ -1.21
LINC01088-203ENST00000507476 KLHL36Q8N4N3 616 aa7.47□□□□□ -1.21
LINC01088-203ENST00000507476 CLEC4DQ8WXI8 215 aa7.47□□□□□ -1.21
LINC01088-203ENST00000507476 CD248Q9HCU0 757 aa7.47□□□□□ -1.21
LINC01088-203ENST00000507476 FTSJ1Q9UET6 329 aa7.47□□□□□ -1.21
LINC01088-203ENST00000507476 NPEPPSL1A6NEC2 478 aa7.46□□□□□ -1.22
LINC01088-203ENST00000507476 MAFKO60675 156 aa7.46□□□□□ -1.22
LINC01088-203ENST00000507476 PPP2CBP62714 309 aa7.46□□□□□ -1.22
LINC01088-203ENST00000507476 PPP2CAP67775 309 aa7.46□□□□□ -1.22
LINC01088-203ENST00000507476 ARID5AQ03989 594 aa7.46□□□□□ -1.22
LINC01088-203ENST00000507476 TRMT10BQ6PF06 316 aaKnown RBP7.46□□□□□ -1.22
LINC01088-203ENST00000507476 DTX3Q8N9I9 347 aa7.46□□□□□ -1.22
LINC01088-203ENST00000507476 NUDT10Q8NFP7 164 aa7.46□□□□□ -1.22
LINC01088-203ENST00000507476 DNERQ8NFT8 737 aa7.46□□□□□ -1.22
LINC01088-203ENST00000507476 NUDT11Q96G61 164 aa7.46□□□□□ -1.22
LINC01088-203ENST00000507476 PTPN18Q99952 460 aa7.46□□□□□ -1.22
LINC01088-203ENST00000507476 CCDC9Q9Y3X0 531 aaKnown RBP7.46□□□□□ -1.22
LINC01088-203ENST00000507476 TCF3P15923 654 aa7.45□□□□□ -1.22
LINC01088-203ENST00000507476 NFATC3Q12968 1075 aa7.45□□□□□ -1.22
LINC01088-203ENST00000507476 NTRK3Q16288 839 aa7.45□□□□□ -1.22
LINC01088-203ENST00000507476 DDR2Q16832 855 aa7.45□□□□□ -1.22
LINC01088-203ENST00000507476 KCNT2Q6UVM3 1135 aa7.45□□□□□ -1.22
LINC01088-203ENST00000507476 RSPO2Q6UXX9 243 aaPredicted RBP7.45□□□□□ -1.22
LINC01088-203ENST00000507476 OTOP3Q7RTS5 596 aa7.45□□□□□ -1.22
LINC01088-203ENST00000507476 SPRED1Q7Z699 444 aa7.45□□□□□ -1.22
LINC01088-203ENST00000507476 TRIM48Q8IWZ4 208 aa7.45□□□□□ -1.22
LINC01088-203ENST00000507476 TSC22D4Q9Y3Q8 395 aa7.45□□□□□ -1.22
LINC01088-203ENST00000507476 KLHL18O94889 574 aa7.44□□□□□ -1.22
LINC01088-203ENST00000507476 VASNQ6EMK4 673 aa7.44□□□□□ -1.22
LINC01088-203ENST00000507476 ARHGEF18Q6ZSZ5 1173 aa7.44□□□□□ -1.22
LINC01088-203ENST00000507476 CIR1Q86X95 450 aaPredicted RBP7.44□□□□□ -1.22
LINC01088-203ENST00000507476 KRTAP17-1Q9BYP8 105 aa7.44□□□□□ -1.22
LINC01088-203ENST00000507476 DLL4Q9NR61 685 aa7.44□□□□□ -1.22
LINC01088-203ENST00000507476 ARHGEF4Q9NR80 690 aa7.44□□□□□ -1.22
LINC01088-203ENST00000507476 KLF4O43474 513 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 B4GALT4O60513 344 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 LTFP02788 710 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 COL6A2P12110 1019 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 TUSC3Q13454 348 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 HSP90AA2PQ14568 343 aaPredicted RBP7.43□□□□□ -1.22
LINC01088-203ENST00000507476 LBX2Q6XYB7 198 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 ANKS3Q6ZW76 656 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 SLC16A11Q8NCK7 471 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 UHMK1Q8TAS1 419 aaKnown RBP7.43□□□□□ -1.22
LINC01088-203ENST00000507476 SH3RF3Q8TEJ3 882 aaPredicted RBP7.43□□□□□ -1.22
LINC01088-203ENST00000507476 OSBP2Q969R2 916 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 SGSM3Q96HU1 749 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 WWC2-AS2Q96NR7 200 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 KLC2Q9H0B6 622 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 MEGF9Q9H1U4 602 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 BARX1Q9HBU1 254 aaPredicted RBP7.43□□□□□ -1.22
LINC01088-203ENST00000507476 ADAM29Q9UKF5 820 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 ZDHHC9Q9Y397 364 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 TELO2Q9Y4R8 837 aa7.43□□□□□ -1.22
LINC01088-203ENST00000507476 PRODHO43272 600 aa7.42□□□□□ -1.22
LINC01088-203ENST00000507476 KNG1P01042 644 aa7.42□□□□□ -1.22
LINC01088-203ENST00000507476 CKMP06732 381 aa7.42□□□□□ -1.22
LINC01088-203ENST00000507476 FAHP16930 419 aa7.42□□□□□ -1.22
LINC01088-203ENST00000507476 GRK2P25098 689 aa7.42□□□□□ -1.22
LINC01088-203ENST00000507476 DNAJA1P31689 397 aaKnown RBP7.42□□□□□ -1.22
LINC01088-203ENST00000507476 GRK3P35626 688 aa7.42□□□□□ -1.22
LINC01088-203ENST00000507476 HABP4Q5JVS0 413 aaKnown RBP7.42□□□□□ -1.22
LINC01088-203ENST00000507476 DCAF4Q8WV16 495 aa7.42□□□□□ -1.22
LINC01088-203ENST00000507476 KISS1RQ969F8 398 aaPredicted RBP7.42□□□□□ -1.22
LINC01088-203ENST00000507476 AARSD1Q9BTE6 412 aaKnown RBP7.42□□□□□ -1.22
LINC01088-203ENST00000507476 PDGFDQ9GZP0 370 aaPredicted RBP7.42□□□□□ -1.22
LINC01088-203ENST00000507476 JADE2Q9NQC1 790 aa7.42□□□□□ -1.22
LINC01088-203ENST00000507476 NKRFO15226 690 aaKnown RBP eCLIP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms