RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ADCYAP1R1P41586 468 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 ST5P78524 1137 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 STAT4Q14765 748 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 GPR19Q15760 415 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 EMC4Q5J8M3 183 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 BICRALQ6AI39 1079 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 LILRA6Q6PI73 481 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 HHIPL2Q6UWX4 724 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 ARHGAP36Q6ZRI8 547 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 PTRH1Q86Y79 214 aaKnown RBP4.85□□□□□ -1.63
LSM6-205ENST00000507449 NOSTRINQ8IVI9 506 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 RBM12BQ8IXT5 1001 aaKnown RBP4.85□□□□□ -1.63
LSM6-205ENST00000507449 OR2W6PQ8NHA6 318 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 UHMK1Q8TAS1 419 aaKnown RBP4.85□□□□□ -1.63
LSM6-205ENST00000507449 USP33Q8TEY7 942 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 CHTF18Q8WVB6 975 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 CD244Q9BZW8 370 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.85□□□□□ -1.63
LSM6-205ENST00000507449 SLC6A20Q9NP91 592 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 H2AFY2Q9P0M6 372 aaPredicted RBP4.85□□□□□ -1.63
LSM6-205ENST00000507449 COA3Q9Y2R0 106 aaPredicted RBP4.85□□□□□ -1.63
LSM6-205ENST00000507449 HCFC2Q9Y5Z7 792 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 PHLDB1Q86UU1 1377 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 A0A1W2PQ27 194 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 A0A1W2PQ64 194 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 A0A1W2PQC6 194 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 A0A1W2PQD8 194 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 DVL2O14641 736 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 GSTA4O15217 222 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 SGSM2O43147 1006 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 GPR39O43194 453 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 SRGAP3O43295 1099 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 DGKIO75912 1065 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 SLC6A11P48066 632 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 SCNN1BP51168 640 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 ERVFRD-1P60508 538 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 SPIRE1Q08AE8 756 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 SNX17Q15036 470 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 SEC23AQ15436 765 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 CRY1Q16526 586 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 C2orf69Q8N8R5 385 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 NETO2Q8NC67 525 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 ABHD4Q8TB40 342 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 CABP5Q9NP86 173 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 SPTLC3Q9NUV7 552 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 MCM8Q9UJA3 840 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 SRPK3Q9UPE1 567 aa4.84□□□□□ -1.63
LSM6-205ENST00000507449 YBX2Q9Y2T7 364 aaKnown RBP4.84□□□□□ -1.63
LSM6-205ENST00000507449 ZC3H12DA2A288 527 aaKnown RBP4.83□□□□□ -1.64
LSM6-205ENST00000507449 SLC27A2O14975 620 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 LTFP02788 710 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 APPP05067 770 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 RAC2P15153 192 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 FAM50AQ14320 339 aaKnown RBP4.83□□□□□ -1.64
LSM6-205ENST00000507449 STEAP3Q658P3 488 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 ATL2Q8NHH9 583 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 COG1Q8WTW3 980 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 USP7Q93009 1102 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 GPR101Q96P66 508 aaPredicted RBP4.83□□□□□ -1.64
LSM6-205ENST00000507449 TTC1Q99614 292 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 SLC38A3Q99624 504 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 TRIM8Q9BZR9 551 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 IFT22Q9H7X7 185 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 EMC7Q9NPA0 242 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 OXSMQ9NWU1 459 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 THG1LQ9NWX6 298 aaKnown RBP4.83□□□□□ -1.64
LSM6-205ENST00000507449 DSEQ9UL01 958 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 PLA2G2DQ9UNK4 145 aa4.83□□□□□ -1.64
LSM6-205ENST00000507449 SLC12A8A0AV02 714 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 TGM5O43548 720 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 GAS7O60861 476 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 FKBP9O95302 570 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 CYBBP04839 570 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 PDGFRBP09619 1106 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 LSSP48449 732 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 EPHA5P54756 1037 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 IRF9Q00978 393 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 PLEKHG6Q3KR16 790 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 BRDTQ58F21 947 aaPredicted RBP4.82□□□□□ -1.64
LSM6-205ENST00000507449 FIGNQ5HY92 759 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 CPZQ66K79 652 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 FKBP9P1Q75LS8 142 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 DCP2Q8IU60 420 aaKnown RBP4.82□□□□□ -1.64
LSM6-205ENST00000507449 WDR66Q8TBY9 1149 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 PANK1Q8TE04 598 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 INTS4Q96HW7 963 aaKnown RBP4.82□□□□□ -1.64
LSM6-205ENST00000507449 KIRREL1Q96J84 757 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 BOCQ9BWV1 1114 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 HOMER2Q9NSB8 354 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 TYW1Q9NV66 732 aaKnown RBP4.82□□□□□ -1.64
LSM6-205ENST00000507449 KLHL14Q9P2G3 628 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 ASH2LQ9UBL3 628 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 PALD1Q9ULE6 856 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 ZNF652Q9Y2D9 606 aa4.82□□□□□ -1.64
LSM6-205ENST00000507449 WASHC2CQ9Y4E1 1318 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 A0A1W2PQJ5 194 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 TCRBV5S2A0A599 114 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 FAM90A27PA6NNH2 459 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 NUDT19A8MXV4 375 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms