RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 SLC9A7Q96T83 725 aa17.81■□□□□ 0.44
DDR1-258ENST00000506573 CXXC1Q9P0U4 656 aaPredicted RBP17.81■□□□□ 0.44
DDR1-258ENST00000506573 PCDHA6Q9UN73 950 aa17.81■□□□□ 0.44
DDR1-258ENST00000506573 PCDHA8Q9Y5H6 950 aa17.81■□□□□ 0.44
DDR1-258ENST00000506573 V9GY48 417 aaPredicted RBP17.81■□□□□ 0.44
DDR1-258ENST00000506573 CNTNAP5Q8WYK1 1306 aa17.8■□□□□ 0.44
DDR1-258ENST00000506573 GRXCR1A8MXD5 290 aa17.8■□□□□ 0.44
DDR1-258ENST00000506573 EFCAB14O75071 495 aa17.8■□□□□ 0.44
DDR1-258ENST00000506573 LGALS2P05162 132 aa17.8■□□□□ 0.44
DDR1-258ENST00000506573 RBL2Q08999 1139 aa17.8■□□□□ 0.44
DDR1-258ENST00000506573 UBE2SQ16763 222 aa17.8■□□□□ 0.44
DDR1-258ENST00000506573 ERICH6BQ5W0A0 696 aa17.8■□□□□ 0.44
DDR1-258ENST00000506573 MCTP2Q6DN12 878 aa17.8■□□□□ 0.44
DDR1-258ENST00000506573 Q6ZUG5 572 aa17.8■□□□□ 0.44
DDR1-258ENST00000506573 MAFAQ8NHW3 353 aaPredicted RBP17.8■□□□□ 0.44
DDR1-258ENST00000506573 GPKOWQ92917 476 aaPredicted RBP eCLIP17.8■□□□□ 0.44
DDR1-258ENST00000506573 KCNB2Q92953 911 aa17.8■□□□□ 0.44
DDR1-258ENST00000506573 TNPO1Q92973 898 aaKnown RBP17.8■□□□□ 0.44
DDR1-258ENST00000506573 C16orf70Q9BSU1 422 aa17.8■□□□□ 0.44
DDR1-258ENST00000506573 RIC8AQ9NPQ8 531 aa17.8■□□□□ 0.44
DDR1-258ENST00000506573 BRPF3Q9ULD4 1205 aa17.8■□□□□ 0.44
DDR1-258ENST00000506573 PCDHA11Q9Y5I1 949 aa17.8■□□□□ 0.44
DDR1-258ENST00000506573 EMSYQ7Z589 1322 aa17.79■□□□□ 0.44
DDR1-258ENST00000506573 CKBP12277 381 aa17.79■□□□□ 0.44
DDR1-258ENST00000506573 COL9A3Q14050 684 aaPredicted RBP17.79■□□□□ 0.44
DDR1-258ENST00000506573 WWC2Q6AWC2 1192 aa17.79■□□□□ 0.44
DDR1-258ENST00000506573 BRF1Q92994 677 aa17.79■□□□□ 0.44
DDR1-258ENST00000506573 ATP6V0A1Q93050 837 aa17.79■□□□□ 0.44
DDR1-258ENST00000506573 GPR20Q99678 358 aa17.79■□□□□ 0.44
DDR1-258ENST00000506573 BARHL2Q9NY43 387 aa17.79■□□□□ 0.44
DDR1-258ENST00000506573 SNX14Q9Y5W7 946 aa17.79■□□□□ 0.44
DDR1-258ENST00000506573 SMCO2A6NFE2 343 aa17.78■□□□□ 0.44
DDR1-258ENST00000506573 PBX2P40425 430 aa17.78■□□□□ 0.44
DDR1-258ENST00000506573 SP4Q02446 784 aa17.78■□□□□ 0.44
DDR1-258ENST00000506573 AP3B2Q13367 1082 aa17.78■□□□□ 0.44
DDR1-258ENST00000506573 JADE2Q9NQC1 790 aa17.78■□□□□ 0.44
DDR1-258ENST00000506573 A0A0C4DFX4 3053 aa17.78■□□□□ 0.44
DDR1-258ENST00000506573 EIF5BO60841 1220 aaKnown RBP17.77■□□□□ 0.44
DDR1-258ENST00000506573 CAND2O75155 1236 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 SMIM10L2AP0DMW4 78 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 SMIM10L2BP0DMW5 78 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 RPS6KB1P23443 525 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 ZNF76P36508 570 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 THPOP40225 353 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 APOBRQ0VD83 1088 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 GRIN2CQ14957 1233 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 UTP14CQ5TAP6 766 aaKnown RBP17.77■□□□□ 0.44
DDR1-258ENST00000506573 PPP2R2DQ66LE6 453 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 CNKSR3Q6P9H4 555 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 SERINC5Q86VE9 423 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 FBXL16Q8N461 479 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 SEPT1Q8WYJ6 367 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 SDF4Q9BRK5 362 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 NKX2-4Q9H2Z4 354 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 PPP4R2Q9NY27 417 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 UBIAD1Q9Y5Z9 338 aa17.77■□□□□ 0.44
DDR1-258ENST00000506573 STXBP3O00186 592 aa17.76■□□□□ 0.43
DDR1-258ENST00000506573 ITGB5P18084 799 aa17.76■□□□□ 0.43
DDR1-258ENST00000506573 SEMA3FQ13275 785 aa17.76■□□□□ 0.43
DDR1-258ENST00000506573 IKBKEQ14164 716 aa17.76■□□□□ 0.43
DDR1-258ENST00000506573 PFKFB3Q16875 520 aaPredicted RBP17.76■□□□□ 0.43
DDR1-258ENST00000506573 BICD2Q8TD16 824 aa17.76■□□□□ 0.43
DDR1-258ENST00000506573 GLG1Q92896 1179 aa17.76■□□□□ 0.43
DDR1-258ENST00000506573 AZI2Q9H6S1 392 aa17.76■□□□□ 0.43
DDR1-258ENST00000506573 C6orf50Q9HD87 102 aa17.76■□□□□ 0.43
DDR1-258ENST00000506573 CYP46A1Q9Y6A2 500 aa17.76■□□□□ 0.43
DDR1-258ENST00000506573 NRCAMQ92823 1304 aa17.75■□□□□ 0.43
DDR1-258ENST00000506573 ABHD14A-ACY1A0A1B0GW23 586 aa17.75■□□□□ 0.43
DDR1-258ENST00000506573 RSPH10B2B2RC85 870 aa17.75■□□□□ 0.43
DDR1-258ENST00000506573 RSPH10BP0C881 870 aa17.75■□□□□ 0.43
DDR1-258ENST00000506573 SCG2P13521 617 aa17.75■□□□□ 0.43
DDR1-258ENST00000506573 GNA11P29992 359 aa17.75■□□□□ 0.43
DDR1-258ENST00000506573 ADD1P35611 737 aaKnown RBP17.75■□□□□ 0.43
DDR1-258ENST00000506573 TCF7P36402 384 aaPredicted RBP17.75■□□□□ 0.43
DDR1-258ENST00000506573 FUT2Q10981 343 aa17.75■□□□□ 0.43
DDR1-258ENST00000506573 RSPH3Q86UC2 560 aa17.75■□□□□ 0.43
DDR1-258ENST00000506573 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.75■□□□□ 0.43
DDR1-258ENST00000506573 DHX38Q92620 1227 aaKnown RBP17.75■□□□□ 0.43
DDR1-258ENST00000506573 MXRA8Q9BRK3 442 aa17.75■□□□□ 0.43
DDR1-258ENST00000506573 ZBED2Q9BTP6 218 aa17.75■□□□□ 0.43
DDR1-258ENST00000506573 ANO3Q9BYT9 981 aa17.75■□□□□ 0.43
DDR1-258ENST00000506573 SMARCAD1Q9H4L7 1026 aa17.75■□□□□ 0.43
DDR1-258ENST00000506573 JPH1Q9HDC5 661 aaPredicted RBP17.75■□□□□ 0.43
DDR1-258ENST00000506573 ERAP1Q9NZ08 941 aa17.75■□□□□ 0.43
DDR1-258ENST00000506573 MYH7BA7E2Y1 1941 aa17.74■□□□□ 0.43
DDR1-258ENST00000506573 CXCL10P02778 98 aa17.74■□□□□ 0.43
DDR1-258ENST00000506573 RPLP2P05387 115 aaKnown RBP17.74■□□□□ 0.43
DDR1-258ENST00000506573 CPA1P15085 419 aa17.74■□□□□ 0.43
DDR1-258ENST00000506573 KCNA2P16389 499 aa17.74■□□□□ 0.43
DDR1-258ENST00000506573 CDC27P30260 824 aa17.74■□□□□ 0.43
DDR1-258ENST00000506573 RABGGTBP53611 331 aa17.74■□□□□ 0.43
DDR1-258ENST00000506573 CEP55Q53EZ4 464 aa17.74■□□□□ 0.43
DDR1-258ENST00000506573 ZNF618Q5T7W0 954 aa17.74■□□□□ 0.43
DDR1-258ENST00000506573 CPLX2Q6PUV4 134 aaKnown RBP17.74■□□□□ 0.43
DDR1-258ENST00000506573 RUFY3Q7L099 469 aa17.74■□□□□ 0.43
DDR1-258ENST00000506573 HERC6Q8IVU3 1022 aa17.74■□□□□ 0.43
DDR1-258ENST00000506573 CCDC148Q8NFR7 591 aa17.74■□□□□ 0.43
DDR1-258ENST00000506573 CTAGE1Q96RT6 745 aa17.74■□□□□ 0.43
DDR1-258ENST00000506573 RNPEPQ9H4A4 650 aa17.74■□□□□ 0.43
DDR1-258ENST00000506573 PRDM12Q9H4Q4 367 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms