RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 CORINQ9Y5Q5 1042 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 PTCH2Q9Y6C5 1203 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 TMEM229AB2RXF0 380 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 KCNA2P16389 499 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 PSMC4P43686 418 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 GPC3P51654 580 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 MORN1Q5T089 497 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 MAP1SQ66K74 1059 aaPredicted RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 FBXL19Q6PCT2 694 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 MAATS1Q7Z4T9 603 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 C11orf96Q7Z7L8 435 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 APLFQ8IW19 511 aaPredicted RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 ALDH16A1Q8IZ83 802 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 NEK11Q8NG66 645 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 MORC4Q8TE76 937 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 GOLGA1Q92805 767 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 CNKSR1Q969H4 720 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 PPP2R3CQ969Q6 453 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 JAKMIP2Q96AA8 810 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 GCC1Q96CN9 775 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 DCAF5Q96JK2 942 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 CRACR2AQ9BSW2 395 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 VPS33BQ9H267 617 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.55□□□□□ -2
NEDD4-205ENST00000506154 SLC39A2Q9NP94 309 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 DIAPH3Q9NSV4 1193 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 CNTN3Q9P232 1028 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 RCAN3Q9UKA8 241 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 TRAF6Q9Y4K3 522 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 COMMD10Q9Y6G5 202 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 UBN2Q6ZU65 1347 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 VIL1P09327 827 aaKnown RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 SETSIPP0DME0 302 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 ATP5JP18859 108 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 TSPAN7P41732 249 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 GUCY2FP51841 1108 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 PPIDQ08752 370 aaKnown RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 MPP3Q13368 585 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 FXNQ16595 210 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 USH1GQ495M9 461 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 ZFYVE27Q5T4F4 411 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 RNF20Q5VTR2 975 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 C16orf87Q6PH81 154 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 LVRNQ6Q4G3 990 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 KIAA0825Q8IV33 1275 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 SLC7A5P1Q8MH63 180 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 SSH3Q8TE77 659 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 ZBED3Q96IU2 234 aaPredicted RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 MRPL46Q9H2W6 279 aaKnown RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 UNC45AQ9H3U1 944 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 C11orf16Q9NQ32 467 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 LRRC4BQ9NT99 713 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 KLF15Q9UIH9 416 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 J3QW42 95 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 WDR46O15213 610 aaKnown RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 SCAND1P57086 179 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 KCNC4Q03721 635 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 KRT72Q14CN4 511 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 SF1Q15637 639 aaKnown RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 DDB1Q16531 1140 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 ANKRD39Q53RE8 183 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 SYNE3Q6ZMZ3 975 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 AGMOQ6ZNB7 445 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 MYLK4Q86YV6 388 aaPredicted RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 TAF4BQ92750 862 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 GPR101Q96P66 508 aaPredicted RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 KCTD15Q96SI1 283 aaPredicted RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 MMADHCQ9H3L0 296 aaPredicted RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 ZFAND3Q9H8U3 227 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 HELLSQ9NRZ9 838 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 FNIP2Q9P278 1114 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 HSFX1Q9UBD0 423 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 SLX4Q8IY92 1834 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 CCDC171Q6TFL3 1326 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 MYH13Q9UKX3 1938 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 TBKBP1A7MCY6 615 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 DDX3XO00571 662 aaKnown RBP eCLIP2.55□□□□□ -2
NEDD4-205ENST00000506154 CAMTA2O94983 1202 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 FOSP01100 380 aaPredicted RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 RRM1P23921 792 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 CTCFP49711 727 aaPredicted RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 FOXO4P98177 505 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 EIF2B5Q13144 721 aaKnown RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 SGSM1Q2NKQ1 1148 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 DPY19L1Q2PZI1 675 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 FAM209AQ5JX71 171 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 RASIP1Q5U651 963 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 NCAPH2Q6IBW4 605 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 GDF6Q6KF10 455 aaPredicted RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 GPR153Q6NV75 609 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 CCDC73Q6ZRK6 1079 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 ARHGEF18Q6ZSZ5 1173 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 CLP1Q92989 425 aaKnown RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 PHACTR1Q9C0D0 580 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 B3GNT4Q9C0J1 378 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 DCTPP1Q9H773 170 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 ADAM21Q9UKJ8 722 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 TPX2Q9ULW0 747 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms