RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 ZCCHC8Q6NZY4 707 aaKnown RBP8.13□□□□□ -1.11
NIPBL-205ENST00000505998 ABHD17CQ6PCB6 329 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 ARHGAP36Q6ZRI8 547 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 EP400NLQ6ZTU2 488 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 UBE2R2Q712K3 238 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-205ENST00000505998 AMIGO3Q86WK7 504 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 TRIM48Q8IWZ4 208 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 CISD2Q8N5K1 135 aaKnown RBP8.13□□□□□ -1.11
NIPBL-205ENST00000505998 IGSF22Q8N9C0 903 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 MZB1Q8WU39 189 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 YIPF4Q9BSR8 244 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 GCM1Q9NP62 436 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 ASH2LQ9UBL3 628 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 PLA2G2DQ9UNK4 145 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 CCDC88BA6NC98 1476 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 IRS2Q9Y4H2 1338 aa8.12□□□□□ -1.11
NIPBL-205ENST00000505998 NFIBO00712 420 aa8.12□□□□□ -1.11
NIPBL-205ENST00000505998 N4BP3O15049 544 aa8.12□□□□□ -1.11
NIPBL-205ENST00000505998 ASGR2P07307 311 aa8.12□□□□□ -1.11
NIPBL-205ENST00000505998 JMJD7P0C870 316 aa8.12□□□□□ -1.11
NIPBL-205ENST00000505998 EPHB3P54753 998 aa8.12□□□□□ -1.11
NIPBL-205ENST00000505998 EGFLAMQ63HQ2 1017 aa8.12□□□□□ -1.11
NIPBL-205ENST00000505998 CNNM4Q6P4Q7 775 aa8.12□□□□□ -1.11
NIPBL-205ENST00000505998 ETV3LQ6ZN32 361 aa8.12□□□□□ -1.11
NIPBL-205ENST00000505998 OSTM1Q86WC4 334 aa8.12□□□□□ -1.11
NIPBL-205ENST00000505998 ARRDC4Q8NCT1 418 aa8.12□□□□□ -1.11
NIPBL-205ENST00000505998 RNF38Q9H0F5 515 aa8.12□□□□□ -1.11
NIPBL-205ENST00000505998 SAMD15Q9P1V8 674 aa8.12□□□□□ -1.11
NIPBL-205ENST00000505998 PCDHA5Q9Y5H7 936 aa8.12□□□□□ -1.11
NIPBL-205ENST00000505998 CFTRP13569 1480 aa8.12□□□□□ -1.11
NIPBL-205ENST00000505998 CADPSQ9ULU8 1353 aa8.11□□□□□ -1.11
NIPBL-205ENST00000505998 FBLN1P23142 703 aa8.11□□□□□ -1.11
NIPBL-205ENST00000505998 GLDCP23378 1020 aa8.11□□□□□ -1.11
NIPBL-205ENST00000505998 TXKP42681 527 aa8.11□□□□□ -1.11
NIPBL-205ENST00000505998 LACTBP83111 547 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-205ENST00000505998 TUSC3Q13454 348 aa8.11□□□□□ -1.11
NIPBL-205ENST00000505998 LRRTM3Q86VH5 581 aa8.11□□□□□ -1.11
NIPBL-205ENST00000505998 CD244Q9BZW8 370 aa8.11□□□□□ -1.11
NIPBL-205ENST00000505998 FAN1Q9Y2M0 1017 aa8.11□□□□□ -1.11
NIPBL-205ENST00000505998 TCRBV5S4A2TA0A5A2 114 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 ZNF561-AS1K7EIQ3 104 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 BUB1BO60566 1050 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-205ENST00000505998 AMY2AP04746 511 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 AMY2BP19961 511 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 JAM2P57087 298 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 CFAP100Q494V2 611 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 TM4SF20Q53R12 229 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 TMEM177Q53S58 311 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 PIK3R6Q5UE93 754 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 CDCA2Q69YH5 1023 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-205ENST00000505998 ATG14Q6ZNE5 492 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 KCTD1Q719H9 257 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-205ENST00000505998 PTRH1Q86Y79 214 aaKnown RBP8.1□□□□□ -1.11
NIPBL-205ENST00000505998 MIB1Q86YT6 1006 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 FAM126BQ8IXS8 530 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 RBM12BQ8IXT5 1001 aaKnown RBP8.1□□□□□ -1.11
NIPBL-205ENST00000505998 NLGN4XQ8N0W4 816 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 DDX11Q96FC9 970 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 WNK4Q96J92 1243 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 SRPK3Q9UPE1 567 aa8.1□□□□□ -1.11
NIPBL-205ENST00000505998 TCAF2A6NFQ2 919 aa8.09□□□□□ -1.11
NIPBL-205ENST00000505998 M0R2C6 588 aa8.09□□□□□ -1.11
NIPBL-205ENST00000505998 GLRX3O76003 335 aaKnown RBP8.09□□□□□ -1.11
NIPBL-205ENST00000505998 MED14OSP0DP75 135 aa8.09□□□□□ -1.11
NIPBL-205ENST00000505998 NEK4P51957 841 aa8.09□□□□□ -1.11
NIPBL-205ENST00000505998 GRIN1Q05586 938 aa8.09□□□□□ -1.11
NIPBL-205ENST00000505998 CACNB2Q08289 660 aaPredicted RBP8.09□□□□□ -1.11
NIPBL-205ENST00000505998 PKN1Q16512 942 aa8.09□□□□□ -1.11
NIPBL-205ENST00000505998 OVCH1Q7RTY7 1134 aa8.09□□□□□ -1.11
NIPBL-205ENST00000505998 ZC3H18Q86VM9 953 aaKnown RBP8.09□□□□□ -1.11
NIPBL-205ENST00000505998 IGDCC3Q8IVU1 814 aa8.09□□□□□ -1.11
NIPBL-205ENST00000505998 C2orf69Q8N8R5 385 aa8.09□□□□□ -1.11
NIPBL-205ENST00000505998 BHLHE22Q8NFJ8 381 aaPredicted RBP8.09□□□□□ -1.11
NIPBL-205ENST00000505998 SH3RF2Q8TEC5 729 aa8.09□□□□□ -1.11
NIPBL-205ENST00000505998 CPA5Q8WXQ8 436 aa8.09□□□□□ -1.11
NIPBL-205ENST00000505998 DTLQ9NZJ0 730 aa8.09□□□□□ -1.11
NIPBL-205ENST00000505998 MAN2B1O00754 1011 aa8.08□□□□□ -1.12
NIPBL-205ENST00000505998 LTFP02788 710 aa8.08□□□□□ -1.12
NIPBL-205ENST00000505998 MYCLP1P12525 358 aaPredicted RBP8.08□□□□□ -1.12
NIPBL-205ENST00000505998 MC3RP41968 323 aa8.08□□□□□ -1.12
NIPBL-205ENST00000505998 EPHA5P54756 1037 aa8.08□□□□□ -1.12
NIPBL-205ENST00000505998 CD300LDQ6UXZ3 194 aa8.08□□□□□ -1.12
NIPBL-205ENST00000505998 PPM1KQ8N3J5 372 aa8.08□□□□□ -1.12
NIPBL-205ENST00000505998 TTLL11Q8NHH1 800 aa8.08□□□□□ -1.12
NIPBL-205ENST00000505998 CLEC4DQ8WXI8 215 aa8.08□□□□□ -1.12
NIPBL-205ENST00000505998 DDX1Q92499 740 aaKnown RBP8.08□□□□□ -1.12
NIPBL-205ENST00000505998 TOE1Q96GM8 510 aaKnown RBP8.08□□□□□ -1.12
NIPBL-205ENST00000505998 SIGLEC10Q96LC7 697 aa8.08□□□□□ -1.12
NIPBL-205ENST00000505998 TARS2Q9BW92 718 aaKnown RBP8.08□□□□□ -1.12
NIPBL-205ENST00000505998 SMURF1Q9HCE7 757 aa8.08□□□□□ -1.12
NIPBL-205ENST00000505998 CABP5Q9NP86 173 aa8.08□□□□□ -1.12
NIPBL-205ENST00000505998 NGRNQ9NPE2 291 aaKnown RBP8.08□□□□□ -1.12
NIPBL-205ENST00000505998 IRAK3Q9Y616 596 aa8.08□□□□□ -1.12
NIPBL-205ENST00000505998 KCNK3O14649 394 aa8.07□□□□□ -1.12
NIPBL-205ENST00000505998 KPNA6O60684 536 aa8.07□□□□□ -1.12
NIPBL-205ENST00000505998 TSPAN15O95858 294 aa8.07□□□□□ -1.12
NIPBL-205ENST00000505998 KRT1P04264 644 aa8.07□□□□□ -1.12
NIPBL-205ENST00000505998 C1QTNF9P0C862 333 aa8.07□□□□□ -1.12
NIPBL-205ENST00000505998 ATF2P15336 505 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms