RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 MRPL11Q9Y3B7 192 aaKnown RBP13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 USP34Q70CQ2 3546 aa13.5□□□□□ -0.25
CCHCR1-219ENST00000505392 ZNF318Q5VUA4 2279 aa13.5□□□□□ -0.25
CCHCR1-219ENST00000505392 MYO7AQ13402 2215 aa13.5□□□□□ -0.25
CCHCR1-219ENST00000505392 TBX10O75333 385 aa13.5□□□□□ -0.25
CCHCR1-219ENST00000505392 RGS20O76081 388 aa13.5□□□□□ -0.25
CCHCR1-219ENST00000505392 SMIM10L2AP0DMW4 78 aa13.5□□□□□ -0.25
CCHCR1-219ENST00000505392 SMIM10L2BP0DMW5 78 aa13.5□□□□□ -0.25
CCHCR1-219ENST00000505392 HAND2P61296 217 aa13.5□□□□□ -0.25
CCHCR1-219ENST00000505392 SP2Q02086 613 aa13.5□□□□□ -0.25
CCHCR1-219ENST00000505392 C20orf194Q5TEA3 1177 aa13.5□□□□□ -0.25
CCHCR1-219ENST00000505392 KCNV1Q6PIU1 500 aa13.5□□□□□ -0.25
CCHCR1-219ENST00000505392 MFSD6Q6ZSS7 791 aa13.5□□□□□ -0.25
CCHCR1-219ENST00000505392 APBB2Q92870 758 aa13.5□□□□□ -0.25
CCHCR1-219ENST00000505392 ALG13Q9NP73 1137 aaKnown RBP13.5□□□□□ -0.25
CCHCR1-219ENST00000505392 RWDD3Q9Y3V2 267 aa13.5□□□□□ -0.25
CCHCR1-219ENST00000505392 DHX16O60231 1041 aaKnown RBP13.49□□□□□ -0.25
CCHCR1-219ENST00000505392 GFRA3O60609 400 aa13.49□□□□□ -0.25
CCHCR1-219ENST00000505392 LINC00271P0C7V0 271 aa13.49□□□□□ -0.25
CCHCR1-219ENST00000505392 NDUFV1P49821 464 aa13.49□□□□□ -0.25
CCHCR1-219ENST00000505392 ZXDAP98168 799 aa13.49□□□□□ -0.25
CCHCR1-219ENST00000505392 QRICH1Q2TAL8 776 aa13.49□□□□□ -0.25
CCHCR1-219ENST00000505392 DGKHQ86XP1 1220 aa13.49□□□□□ -0.25
CCHCR1-219ENST00000505392 FBXL6Q8N531 539 aa13.49□□□□□ -0.25
CCHCR1-219ENST00000505392 ZFP91Q96JP5 570 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-219ENST00000505392 HELLSQ9NRZ9 838 aa13.49□□□□□ -0.25
CCHCR1-219ENST00000505392 FAM86C1Q9NVL1 165 aa13.49□□□□□ -0.25
CCHCR1-219ENST00000505392 TECTAO75443 2155 aa13.48□□□□□ -0.25
CCHCR1-219ENST00000505392 MICAL3Q7RTP6 2002 aa13.48□□□□□ -0.25
CCHCR1-219ENST00000505392 CAND2O75155 1236 aa13.48□□□□□ -0.25
CCHCR1-219ENST00000505392 EYA4O95677 639 aa13.48□□□□□ -0.25
CCHCR1-219ENST00000505392 TGFB3P10600 412 aa13.48□□□□□ -0.25
CCHCR1-219ENST00000505392 HOXC8P31273 242 aa13.48□□□□□ -0.25
CCHCR1-219ENST00000505392 CAMK1Q14012 370 aa13.48□□□□□ -0.25
CCHCR1-219ENST00000505392 VSIG10LQ86VR7 867 aa13.48□□□□□ -0.25
CCHCR1-219ENST00000505392 MIER1Q8N108 512 aa13.48□□□□□ -0.25
CCHCR1-219ENST00000505392 CLP1Q92989 425 aaKnown RBP13.48□□□□□ -0.25
CCHCR1-219ENST00000505392 MSLNLQ96KJ4 702 aa13.48□□□□□ -0.25
CCHCR1-219ENST00000505392 PDCD2LQ9BRP1 358 aa13.48□□□□□ -0.25
CCHCR1-219ENST00000505392 BCAS3Q9H6U6 928 aa13.48□□□□□ -0.25
CCHCR1-219ENST00000505392 SETD4Q9NVD3 440 aa13.48□□□□□ -0.25
CCHCR1-219ENST00000505392 PLAGL2Q9UPG8 496 aa13.48□□□□□ -0.25
CCHCR1-219ENST00000505392 LOC730098B7Z3J9 87 aa13.47□□□□□ -0.25
CCHCR1-219ENST00000505392 ENPP3O14638 875 aa13.47□□□□□ -0.25
CCHCR1-219ENST00000505392 LGALS2P05162 132 aa13.47□□□□□ -0.25
CCHCR1-219ENST00000505392 GNAT1P11488 350 aa13.47□□□□□ -0.25
CCHCR1-219ENST00000505392 HSD17B4P51659 736 aa13.47□□□□□ -0.25
CCHCR1-219ENST00000505392 RRP1P56182 461 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-219ENST00000505392 BTG3Q14201 252 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-219ENST00000505392 MCMDC2Q4G0Z9 681 aa13.47□□□□□ -0.25
CCHCR1-219ENST00000505392 PNMA1Q8ND90 353 aa13.47□□□□□ -0.25
CCHCR1-219ENST00000505392 ATOH1Q92858 354 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-219ENST00000505392 GPKOWQ92917 476 aaPredicted RBP eCLIP13.47□□□□□ -0.255e-9■■■■□ 21.7
CCHCR1-219ENST00000505392 USP26Q9BXU7 913 aa13.47□□□□□ -0.25
CCHCR1-219ENST00000505392 JMJD4Q9H9V9 463 aa13.47□□□□□ -0.25
CCHCR1-219ENST00000505392 CLEC1BQ9P126 229 aa13.47□□□□□ -0.25
CCHCR1-219ENST00000505392 ADGRA3Q8IWK6 1321 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 NOP56O00567 594 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 OPLAHO14841 1288 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 CHRNA1P02708 482 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 MMP1P03956 469 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 PCP11498 1178 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 MX1P20591 662 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 UBA1P22314 1058 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 AVPR2P30518 371 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 FOXK2Q01167 660 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 PGM5Q15124 567 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 FAM26DQ5JW98 314 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 STOX1Q6ZVD7 989 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 ESR2Q92731 530 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 PPP2R3CQ969Q6 453 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 EVI5LQ96CN4 794 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 ZNF689Q96CS4 500 aaPredicted RBP13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 FAM227BQ96M60 508 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 PLVAPQ9BX97 442 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 KAT14Q9H8E8 782 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 CFAP54Q96N23 3096 aa13.46□□□□□ -0.25
CCHCR1-219ENST00000505392 GHRP10912 638 aa13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 DNAJB1P25685 340 aa13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 HOXA13P31271 388 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 VCPP55072 806 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 SIGLEC14Q08ET2 396 aa13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 CBX2Q14781 532 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 ASPRV1Q53RT3 343 aa13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 ADGRD2Q7Z7M1 963 aa13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 RBM23Q86U06 439 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 TBC1D10CQ8IV04 446 aa13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 SMRP1Q8NCR6 262 aa13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 SPPL3Q8TCT6 385 aa13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 RPGRIP1Q96KN7 1286 aa13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 AMNQ9BXJ7 453 aa13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 IRF2BPLQ9H1B7 796 aa13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 RNF41Q9H4P4 317 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 RC3H2Q9HBD1 1191 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 MAP3K20Q9NYL2 800 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 SUPT16HQ9Y5B9 1047 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-219ENST00000505392 A0A0D9SFI3 127 aa13.44□□□□□ -0.26
CCHCR1-219ENST00000505392 H0Y858 1186 aa13.44□□□□□ -0.26
CCHCR1-219ENST00000505392 DGKIO75912 1065 aa13.44□□□□□ -0.26
CCHCR1-219ENST00000505392 PARP1P09874 1014 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms