RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 FAM217BQ9NTX9 383 aaPredicted RBP6.77□□□□□ -1.33
SPOP-208ENST00000504889 LTBP2Q14767 1821 aa6.77□□□□□ -1.33
SPOP-208ENST00000504889 KIAA1217Q5T5P2 1943 aa6.77□□□□□ -1.33
SPOP-208ENST00000504889 PDE4DIPQ5VU43 2346 aa6.77□□□□□ -1.33
SPOP-208ENST00000504889 GRIN2DO15399 1336 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 FRMPD4Q14CM0 1322 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 H3BRB1 525 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 BACH1O14867 736 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 MAFGO15525 162 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 MARCH6O60337 910 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 SEC24BO95487 1268 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 CD4P01730 458 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 FGBP02675 491 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 LGALS2P05162 132 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 GNAT1P11488 350 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 ACTN1P12814 892 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 ITGB8P26012 769 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 ICAM3P32942 547 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 TCF7P36402 384 aaPredicted RBP6.76□□□□□ -1.33
SPOP-208ENST00000504889 ARHGAP4P98171 946 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 FUT2Q10981 343 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 SCRN1Q12765 414 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 CEP55Q53EZ4 464 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 C9orf50Q5SZB4 431 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 GDF6Q6KF10 455 aaPredicted RBP6.76□□□□□ -1.33
SPOP-208ENST00000504889 OTOP2Q7RTS6 562 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 PLA2G4DQ86XP0 818 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 CKAP2LQ8IYA6 745 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 RPUSD2Q8IZ73 545 aaKnown RBP6.76□□□□□ -1.33
SPOP-208ENST00000504889 NECAB1Q8N987 351 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 SLC43A3Q8NBI5 491 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 RASGRP4Q8TDF6 673 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 WASF1Q92558 559 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 ATP6V0A1Q93050 837 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 LRCH3Q96II8 777 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 UIMC1Q96RL1 719 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 MXRA8Q9BRK3 442 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 ZNF577Q9BSK1 485 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 ZMYND12Q9H0C1 365 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 TUT1Q9H6E5 874 aaKnown RBP6.76□□□□□ -1.33
SPOP-208ENST00000504889 BRMS1Q9HCU9 246 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 JPH1Q9HDC5 661 aaPredicted RBP6.76□□□□□ -1.33
SPOP-208ENST00000504889 JADE2Q9NQC1 790 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 KCNH7Q9NS40 1196 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 HDAC6Q9UBN7 1215 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 SLC9A2Q9UBY0 812 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 TBX21Q9UL17 535 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 TRPC6Q9Y210 931 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 SAMM50Q9Y512 469 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 NID2Q14112 1375 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 UMODL1Q5DID0 1318 aa6.76□□□□□ -1.33
SPOP-208ENST00000504889 BAZ2BQ9UIF8 2168 aaKnown RBP6.75□□□□□ -1.33
SPOP-208ENST00000504889 CCDC194A0A1B0GVG4 234 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 ESYT2A0FGR8 921 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 ST18O60284 1047 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 DTNBO60941 627 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 ATP9AO75110 1047 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 F2P00734 622 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 SMIM10L2AP0DMW4 78 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 SMIM10L2BP0DMW5 78 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 ITGB5P18084 799 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 SREBF1P36956 1147 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 THPOP40225 353 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 EVCP57679 992 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 IGBP1P78318 339 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 SETQ01105 290 aaPredicted RBP6.75□□□□□ -1.33
SPOP-208ENST00000504889 GNL2Q13823 731 aaKnown RBP6.75□□□□□ -1.33
SPOP-208ENST00000504889 NTRK3Q16288 839 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 PKN1Q16512 942 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 LRIT3Q3SXY7 679 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 PRR16Q569H4 304 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 ZNF697Q5TEC3 545 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 TRMT1LQ7Z2T5 733 aaKnown RBP6.75□□□□□ -1.33
SPOP-208ENST00000504889 TRIM50Q86XT4 487 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 TEX2Q8IWB9 1127 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 BLIDQ8IZY5 108 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 FAM184AQ8NB25 1140 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 CAGE1Q8TC20 777 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 SEPT1Q8WYJ6 367 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 TNPO1Q92973 898 aaKnown RBP6.75□□□□□ -1.33
SPOP-208ENST00000504889 FAM161BQ96MY7 647 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 GPR20Q99678 358 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 SENP7Q9BQF6 1050 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.75□□□□□ -1.339e-6■■■■■ 27.7
SPOP-208ENST00000504889 NOC4LQ9BVI4 516 aaKnown RBP6.75□□□□□ -1.33
SPOP-208ENST00000504889 C22orf23Q9BZE7 217 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 PRO3102Q9H379 93 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 BCAS3Q9H6U6 928 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 IL23AQ9NPF7 189 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 SH3GLB2Q9NR46 395 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 ERAP1Q9NZ08 941 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 ORC3Q9UBD5 711 aaPredicted RBP6.75□□□□□ -1.33
SPOP-208ENST00000504889 GTF2IRD1Q9UHL9 959 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 TPCN1Q9ULQ1 816 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 PCDHA4Q9UN74 947 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 UBIAD1Q9Y5Z9 338 aa6.75□□□□□ -1.33
SPOP-208ENST00000504889 IPO5O00410 1097 aaKnown RBP6.74□□□□□ -1.33
SPOP-208ENST00000504889 PITPNM1O00562 1244 aa6.74□□□□□ -1.33
SPOP-208ENST00000504889 SOX1O00570 391 aaPredicted RBP6.74□□□□□ -1.33
SPOP-208ENST00000504889 CHMP2AO43633 222 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms