RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 CNOT7Q9UIV1 285 aaKnown RBP10.89□□□□□ -0.67
COL1A1-210ENST00000504289 FAM184BQ9ULE4 1060 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 FRMPD4Q14CM0 1322 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 RPTORQ8N122 1335 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 C19orf81C9J6K1 198 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 RRP9O43818 475 aaKnown RBP10.88□□□□□ -0.67
COL1A1-210ENST00000504289 MED24O75448 989 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 CFBP00751 764 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 HNRNPH3P31942 346 aaKnown RBP10.88□□□□□ -0.67
COL1A1-210ENST00000504289 KRT9P35527 623 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 FXR1P51114 621 aaKnown RBP eCLIP10.88□□□□□ -0.67
COL1A1-210ENST00000504289 OAZ1P54368 228 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 EPHA7Q15375 998 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 ECM1Q16610 540 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 MEA1Q16626 185 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 TRIM65Q6PJ69 517 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 MIGA2Q7L4E1 593 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 OTOP1Q7RTM1 612 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 DYMQ7RTS9 669 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 MICALL2Q8IY33 904 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 CCDC170Q8IYT3 715 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 ERO1AQ96HE7 468 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 C12orf42Q96LP6 360 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 NOC4LQ9BVI4 516 aaKnown RBP10.88□□□□□ -0.67
COL1A1-210ENST00000504289 NUCKS1Q9H1E3 243 aaKnown RBP10.88□□□□□ -0.67
COL1A1-210ENST00000504289 SLC38A10Q9HBR0 1119 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 OLFML3Q9NRN5 406 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 ZNHIT6Q9NWK9 470 aaKnown RBP10.88□□□□□ -0.67
COL1A1-210ENST00000504289 SEL1LQ9UBV2 794 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 PCDHA2Q9Y5H9 948 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 COL4A3BPQ9Y5P4 624 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 ADGRG1Q9Y653 693 aa10.88□□□□□ -0.67
COL1A1-210ENST00000504289 ATAD5Q96QE3 1844 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 POTEB3A0JP26 581 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 POTECB2RU33 542 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 E9PMD0 336 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 ZBED4O75132 1171 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 SLU7O95391 586 aaKnown RBP10.87□□□□□ -0.67
COL1A1-210ENST00000504289 KRT18P05783 430 aaKnown RBP10.87□□□□□ -0.67
COL1A1-210ENST00000504289 HOXA13P31271 388 aaPredicted RBP10.87□□□□□ -0.67
COL1A1-210ENST00000504289 PRELPP51888 382 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 NFIL3Q16649 462 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 BMT2Q1RMZ1 405 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 VWA3BQ502W6 1294 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 HERC4Q5GLZ8 1057 aaPredicted RBP10.87□□□□□ -0.67
COL1A1-210ENST00000504289 MIIPQ5JXC2 388 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 LRCH2Q5VUJ6 765 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 NCAPH2Q6IBW4 605 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 POTEBQ6S5H4 581 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 B3GNT9Q6UX72 402 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 LRRC55Q6ZSA7 311 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 STXBP4Q6ZWJ1 553 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 SCYL3Q8IZE3 742 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 NACC1Q96RE7 527 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 EIF2AK1Q9BQI3 630 aaKnown RBP10.87□□□□□ -0.67
COL1A1-210ENST00000504289 MXRA8Q9BRK3 442 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 TTYH3Q9C0H2 523 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 NDST4Q9H3R1 872 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 CCPG1Q9ULG6 757 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 PPP1R9AQ9ULJ8 1098 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 TRAF3IP3Q9Y228 551 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 BCS1LQ9Y276 419 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 LOXHD1Q8IVV2 1947 aa10.87□□□□□ -0.67
COL1A1-210ENST00000504289 ZNF536O15090 1300 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 UBE4BO95155 1302 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 MYPNQ86TC9 1320 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 TTC26A0AVF1 554 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 PDXKO00764 312 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 EIF3DO15371 548 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL1A1-210ENST00000504289 GAS7O60861 476 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 INPP5BP32019 993 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 SNAP25P60880 206 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 KRT83P78385 493 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 GIT2Q14161 759 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 TKFCQ3LXA3 575 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 ARSHQ5FYA8 562 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 NOL9Q5SY16 702 aaKnown RBP10.86□□□□□ -0.67
COL1A1-210ENST00000504289 PCNX4Q63HM2 1172 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 CCDC174Q6PII3 467 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 SYT10Q6XYQ8 523 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 EPM2AIP1Q7L775 607 aaPredicted RBP10.86□□□□□ -0.67
COL1A1-210ENST00000504289 GPC2Q8N158 579 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 TXLNBQ8N3L3 684 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 ANKRD7Q92527 254 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 ZNF592Q92610 1267 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 TEKT3Q9BXF9 490 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 EMILIN3Q9NT22 766 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 TBC1D22BQ9NU19 505 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 DNAI1Q9UI46 699 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 HACL1Q9UJ83 578 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 ODF2LQ9ULJ1 636 aa10.86□□□□□ -0.67
COL1A1-210ENST00000504289 POTEFA5A3E0 1075 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 B4DLN1 442 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 ATP2A1O14983 1001 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 CETN3O15182 167 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 MAFGO15525 162 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 KIF5CO60282 957 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 TBCAO75347 108 aaKnown RBP10.85□□□□□ -0.67
COL1A1-210ENST00000504289 LYPLA2O95372 231 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 SSBP05455 408 aaKnown RBP eCLIP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms