RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.84□□□□□ -0.03
LSM6-204ENST00000504181 BCL11AQ9H165 835 aa14.84□□□□□ -0.03
LSM6-204ENST00000504181 RC3H2Q9HBD1 1191 aaKnown RBP14.84□□□□□ -0.03
LSM6-204ENST00000504181 DLL3Q9NYJ7 618 aa14.84□□□□□ -0.03
LSM6-204ENST00000504181 RALYQ9UKM9 306 aaKnown RBP14.84□□□□□ -0.03
LSM6-204ENST00000504181 SORCS3Q9UPU3 1222 aa14.84□□□□□ -0.03
LSM6-204ENST00000504181 PKD1L2Q7Z442 2459 aa14.84□□□□□ -0.03
LSM6-204ENST00000504181 PLIN4Q96Q06 1357 aa14.84□□□□□ -0.03
LSM6-204ENST00000504181 LMNAP02545 664 aaKnown RBP14.83□□□□□ -0.04
LSM6-204ENST00000504181 ITGB1P05556 798 aa14.83□□□□□ -0.04
LSM6-204ENST00000504181 TSPY3P0CV98 308 aa14.83□□□□□ -0.04
LSM6-204ENST00000504181 TSPY8P0CW00 308 aa14.83□□□□□ -0.04
LSM6-204ENST00000504181 RPS6P62753 249 aaKnown RBP14.83□□□□□ -0.04
LSM6-204ENST00000504181 ANGPT1Q15389 498 aa14.83□□□□□ -0.04
LSM6-204ENST00000504181 UBALD2Q8IYN6 164 aa14.83□□□□□ -0.04
LSM6-204ENST00000504181 DNERQ8NFT8 737 aa14.83□□□□□ -0.04
LSM6-204ENST00000504181 SPPL3Q8TCT6 385 aa14.83□□□□□ -0.04
LSM6-204ENST00000504181 RANBP17Q9H2T7 1088 aaKnown RBP14.83□□□□□ -0.04
LSM6-204ENST00000504181 TSHZ2Q9NRE2 1034 aa14.83□□□□□ -0.04
LSM6-204ENST00000504181 PER2O15055 1255 aa14.82□□□□□ -0.04
LSM6-204ENST00000504181 CLCN5P51795 746 aa14.82□□□□□ -0.04
LSM6-204ENST00000504181 FLCNQ8NFG4 579 aa14.82□□□□□ -0.04
LSM6-204ENST00000504181 POF1BQ8WVV4 589 aa14.82□□□□□ -0.04
LSM6-204ENST00000504181 CLEC4DQ8WXI8 215 aa14.82□□□□□ -0.04
LSM6-204ENST00000504181 APBB2Q92870 758 aa14.82□□□□□ -0.04
LSM6-204ENST00000504181 P2RX5Q93086 422 aa14.82□□□□□ -0.04
LSM6-204ENST00000504181 APOL5Q9BWW9 433 aa14.82□□□□□ -0.04
LSM6-204ENST00000504181 TLE6Q9H808 572 aa14.82□□□□□ -0.04
LSM6-204ENST00000504181 DENND4AQ7Z401 1863 aa14.82□□□□□ -0.04
LSM6-204ENST00000504181 GSG1L2A8MUP6 293 aa14.81□□□□□ -0.04
LSM6-204ENST00000504181 B4DLN1 442 aa14.81□□□□□ -0.04
LSM6-204ENST00000504181 ARP10275 920 aa14.81□□□□□ -0.04
LSM6-204ENST00000504181 SLC16A2P36021 539 aa14.81□□□□□ -0.04
LSM6-204ENST00000504181 MRPL12P52815 198 aaKnown RBP14.81□□□□□ -0.04
LSM6-204ENST00000504181 UBE3CQ15386 1083 aa14.81□□□□□ -0.04
LSM6-204ENST00000504181 RSPO4Q2I0M5 234 aaPredicted RBP14.81□□□□□ -0.04
LSM6-204ENST00000504181 CCDC96Q2M329 555 aa14.81□□□□□ -0.04
LSM6-204ENST00000504181 ERC1Q8IUD2 1116 aa14.81□□□□□ -0.04
LSM6-204ENST00000504181 TMEM57Q8N5G2 664 aa14.81□□□□□ -0.04
LSM6-204ENST00000504181 VN1R2Q8NFZ6 395 aa14.81□□□□□ -0.04
LSM6-204ENST00000504181 NEDD1Q8NHV4 660 aa14.81□□□□□ -0.04
LSM6-204ENST00000504181 FRAT1Q92837 279 aaPredicted RBP14.81□□□□□ -0.04
LSM6-204ENST00000504181 ATP6V0A1Q93050 837 aa14.81□□□□□ -0.04
LSM6-204ENST00000504181 NEK1Q96PY6 1258 aa14.81□□□□□ -0.04
LSM6-204ENST00000504181 BOLA2Q9H3K6 86 aa14.81□□□□□ -0.04
LSM6-204ENST00000504181 ZNF287Q9HBT7 754 aa14.81□□□□□ -0.04
LSM6-204ENST00000504181 FAM208BQ5VWN6 2430 aa14.8□□□□□ -0.04
LSM6-204ENST00000504181 CWF19L1Q69YN2 538 aaKnown RBP14.8□□□□□ -0.04
LSM6-204ENST00000504181 TTBK2Q6IQ55 1244 aa14.8□□□□□ -0.04
LSM6-204ENST00000504181 TRMT2AQ8IZ69 625 aaKnown RBP14.8□□□□□ -0.04
LSM6-204ENST00000504181 KLHL23Q8NBE8 558 aa14.8□□□□□ -0.04
LSM6-204ENST00000504181 ZNF689Q96CS4 500 aaPredicted RBP14.8□□□□□ -0.04
LSM6-204ENST00000504181 MRPL42Q9Y6G3 142 aaKnown RBP14.8□□□□□ -0.04
LSM6-204ENST00000504181 R4GN57 208 aa14.8□□□□□ -0.04
LSM6-204ENST00000504181 C17orf102A2RUQ5 167 aa14.79□□□□□ -0.04
LSM6-204ENST00000504181 TREHO43280 583 aa14.79□□□□□ -0.04
LSM6-204ENST00000504181 PI15O43692 258 aa14.79□□□□□ -0.04
LSM6-204ENST00000504181 SORBS3O60504 671 aa14.79□□□□□ -0.04
LSM6-204ENST00000504181 TFAP4Q01664 338 aa14.79□□□□□ -0.04
LSM6-204ENST00000504181 CCDC105Q8IYK2 499 aa14.79□□□□□ -0.04
LSM6-204ENST00000504181 CYP2W1Q8TAV3 490 aa14.79□□□□□ -0.04
LSM6-204ENST00000504181 ATP8B4Q8TF62 1192 aa14.79□□□□□ -0.04
LSM6-204ENST00000504181 STRBPQ96SI9 672 aaKnown RBP14.79□□□□□ -0.04
LSM6-204ENST00000504181 HAUS7Q99871 368 aa14.79□□□□□ -0.04
LSM6-204ENST00000504181 EPB41L4AQ9HCS5 686 aaPredicted RBP14.79□□□□□ -0.04
LSM6-204ENST00000504181 STX8Q9UNK0 236 aa14.79□□□□□ -0.04
LSM6-204ENST00000504181 NR2E1Q9Y466 385 aa14.79□□□□□ -0.04
LSM6-204ENST00000504181 C2CD4DB7Z1M9 353 aa14.78□□□□□ -0.04
LSM6-204ENST00000504181 IPO8O15397 1037 aaKnown RBP14.78□□□□□ -0.04
LSM6-204ENST00000504181 PPFIA3O75145 1194 aa14.78□□□□□ -0.04
LSM6-204ENST00000504181 ASGR2P07307 311 aa14.78□□□□□ -0.04
LSM6-204ENST00000504181 TDO2P48775 406 aa14.78□□□□□ -0.04
LSM6-204ENST00000504181 NAALADL2Q58DX5 795 aa14.78□□□□□ -0.04
LSM6-204ENST00000504181 SYDE2Q5VT97 1194 aa14.78□□□□□ -0.04
LSM6-204ENST00000504181 DCLK2Q8N568 766 aa14.78□□□□□ -0.04
LSM6-204ENST00000504181 PPTC7Q8NI37 304 aa14.78□□□□□ -0.04
LSM6-204ENST00000504181 RHPN1Q8TCX5 695 aa14.78□□□□□ -0.04
LSM6-204ENST00000504181 MICAL1Q8TDZ2 1067 aa14.78□□□□□ -0.04
LSM6-204ENST00000504181 S1PR5Q9H228 398 aa14.78□□□□□ -0.04
LSM6-204ENST00000504181 SEMA4AQ9H3S1 761 aa14.78□□□□□ -0.04
LSM6-204ENST00000504181 CDH22Q9UJ99 828 aa14.78□□□□□ -0.04
LSM6-204ENST00000504181 DDX41Q9UJV9 622 aaKnown RBP14.78□□□□□ -0.04
LSM6-204ENST00000504181 ANKRD11Q6UB99 2663 aaPredicted RBP14.78□□□□□ -0.04
LSM6-204ENST00000504181 MIA3Q5JRA6 1907 aa14.77□□□□□ -0.04
LSM6-204ENST00000504181 DGKIO75912 1065 aa14.77□□□□□ -0.05
LSM6-204ENST00000504181 IFIT2P09913 472 aaKnown RBP14.77□□□□□ -0.05
LSM6-204ENST00000504181 TECP42680 631 aa14.77□□□□□ -0.05
LSM6-204ENST00000504181 PAN2Q504Q3 1202 aaKnown RBP14.77□□□□□ -0.05
LSM6-204ENST00000504181 GIMAP6Q6P9H5 292 aa14.77□□□□□ -0.05
LSM6-204ENST00000504181 DTWD2Q8NBA8 298 aa14.77□□□□□ -0.05
LSM6-204ENST00000504181 EMID1Q96A84 441 aaPredicted RBP14.77□□□□□ -0.05
LSM6-204ENST00000504181 C2orf16Q68DN1 1984 aa14.76□□□□□ -0.05
LSM6-204ENST00000504181 AOC1P19801 751 aa14.76□□□□□ -0.05
LSM6-204ENST00000504181 LAMC2Q13753 1193 aa14.76□□□□□ -0.05
LSM6-204ENST00000504181 DUSP6Q16828 381 aa14.76□□□□□ -0.05
LSM6-204ENST00000504181 ANKRD54Q6NXT1 300 aa14.76□□□□□ -0.05
LSM6-204ENST00000504181 CLASRPQ8N2M8 674 aaKnown RBP14.76□□□□□ -0.05
LSM6-204ENST00000504181 FRMPD2Q68DX3 1309 aaPredicted RBP14.75□□□□□ -0.05
LSM6-204ENST00000504181 NMT2O60551 498 aa14.75□□□□□ -0.05
LSM6-204ENST00000504181 CAND2O75155 1236 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms