RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 ASGR1P07306 291 aa10.31□□□□□ -0.76
SSBP2-202ENST00000504136 C6orf222P0C671 652 aaPredicted RBP10.31□□□□□ -0.76
SSBP2-202ENST00000504136 GRM5P41594 1212 aa10.31□□□□□ -0.76
SSBP2-202ENST00000504136 FAAP100Q0VG06 881 aa10.31□□□□□ -0.76
SSBP2-202ENST00000504136 TLK2Q86UE8 772 aa10.31□□□□□ -0.76
SSBP2-202ENST00000504136 FBXO16Q8IX29 292 aaPredicted RBP10.31□□□□□ -0.76
SSBP2-202ENST00000504136 ADAM32Q8TC27 787 aa10.31□□□□□ -0.76
SSBP2-202ENST00000504136 FERMT2Q96AC1 680 aa10.31□□□□□ -0.76
SSBP2-202ENST00000504136 TRIM43Q96BQ3 446 aaPredicted RBP10.31□□□□□ -0.76
SSBP2-202ENST00000504136 STARD7Q9NQZ5 370 aa10.31□□□□□ -0.76
SSBP2-202ENST00000504136 TBX21Q9UL17 535 aa10.31□□□□□ -0.76
SSBP2-202ENST00000504136 A0A0U1RQG5 324 aaPredicted RBP10.3□□□□□ -0.76
SSBP2-202ENST00000504136 PTPDC1A2A3K4 754 aa10.3□□□□□ -0.76
SSBP2-202ENST00000504136 ZBTB5O15062 677 aa10.3□□□□□ -0.76
SSBP2-202ENST00000504136 NKRFO15226 690 aaKnown RBP eCLIP10.3□□□□□ -0.76
SSBP2-202ENST00000504136 CYTH3O43739 400 aa10.3□□□□□ -0.76
SSBP2-202ENST00000504136 PPP1R11O60927 126 aaPredicted RBP10.3□□□□□ -0.76
SSBP2-202ENST00000504136 CD4P01730 458 aa10.3□□□□□ -0.76
SSBP2-202ENST00000504136 CLTBP09497 229 aa10.3□□□□□ -0.76
SSBP2-202ENST00000504136 SMARCA1P28370 1054 aa10.3□□□□□ -0.76
SSBP2-202ENST00000504136 HSD17B4P51659 736 aa10.3□□□□□ -0.76
SSBP2-202ENST00000504136 SART3Q15020 963 aaKnown RBP10.3□□□□□ -0.76
SSBP2-202ENST00000504136 TSGA10IPQ3SY00 556 aa10.3□□□□□ -0.76
SSBP2-202ENST00000504136 GNASQ5JWF2 1037 aa10.3□□□□□ -0.76
SSBP2-202ENST00000504136 RALYLQ86SE5 291 aaKnown RBP10.3□□□□□ -0.76
SSBP2-202ENST00000504136 FBXO11Q86XK2 927 aa10.3□□□□□ -0.76
SSBP2-202ENST00000504136 SYTL5Q8TDW5 730 aaPredicted RBP10.3□□□□□ -0.76
SSBP2-202ENST00000504136 GLT1D1Q96MS3 346 aa10.3□□□□□ -0.76
SSBP2-202ENST00000504136 UBE2OQ9C0C9 1292 aaKnown RBP10.3□□□□□ -0.76
SSBP2-202ENST00000504136 LY9Q9HBG7 655 aa10.3□□□□□ -0.76
SSBP2-202ENST00000504136 SENP2Q9HC62 589 aa10.3□□□□□ -0.76
SSBP2-202ENST00000504136 PDGFCQ9NRA1 345 aa10.3□□□□□ -0.76
SSBP2-202ENST00000504136 COL20A1Q9P218 1284 aa10.3□□□□□ -0.76
SSBP2-202ENST00000504136 MRPL11Q9Y3B7 192 aaKnown RBP10.3□□□□□ -0.76
SSBP2-202ENST00000504136 DDX49Q9Y6V7 483 aaKnown RBP10.3□□□□□ -0.76
SSBP2-202ENST00000504136 ZBBXA8MT70 800 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 B4DLN1 442 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 ARVCFO00192 962 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 IFIT3O14879 490 aaKnown RBP10.29□□□□□ -0.76
SSBP2-202ENST00000504136 SLC27A2O14975 620 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 DDAH1O94760 285 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 FBXO45P0C2W1 286 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 ITGB8P26012 769 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 CALML3P27482 149 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 LIFRP42702 1097 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 SMCPP49901 116 aaPredicted RBP10.29□□□□□ -0.76
SSBP2-202ENST00000504136 MRPL12P52815 198 aaKnown RBP10.29□□□□□ -0.76
SSBP2-202ENST00000504136 TRAF1Q13077 416 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 WTAPQ15007 396 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 FSCN1Q16658 493 aaKnown RBP10.29□□□□□ -0.76
SSBP2-202ENST00000504136 USH1GQ495M9 461 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 ZNF787Q6DD87 383 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 CCDC62Q6P9F0 684 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 ZBTB33Q86T24 672 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 MCF2L2Q86YR7 1114 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 FAM126BQ8IXS8 530 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 SCFD2Q8WU76 684 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 TMEM87BQ96K49 555 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 IWS1Q96ST2 819 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 MPHOSPH6Q99547 160 aaKnown RBP10.29□□□□□ -0.76
SSBP2-202ENST00000504136 LBHD1Q9BQE6 289 aaPredicted RBP10.29□□□□□ -0.76
SSBP2-202ENST00000504136 SPZ1Q9BXG8 430 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 AMNQ9BXJ7 453 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 PRKAG2Q9UGJ0 569 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 WASF2Q9Y6W5 498 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 GRIN2DO15399 1336 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 FRMPD4Q14CM0 1322 aa10.29□□□□□ -0.76
SSBP2-202ENST00000504136 ERICH2A1L162 156 aa10.28□□□□□ -0.76
SSBP2-202ENST00000504136 A6NJR5 290 aa10.28□□□□□ -0.76
SSBP2-202ENST00000504136 DCDC2CA8MYV0 355 aa10.28□□□□□ -0.76
SSBP2-202ENST00000504136 SH2B2O14492 632 aaPredicted RBP10.28□□□□□ -0.76
SSBP2-202ENST00000504136 COL9A3Q14050 684 aaPredicted RBP10.28□□□□□ -0.76
SSBP2-202ENST00000504136 TMEM67Q5HYA8 995 aa10.28□□□□□ -0.76
SSBP2-202ENST00000504136 TMEM63BQ5T3F8 832 aa10.28□□□□□ -0.76
SSBP2-202ENST00000504136 CREB3L3Q68CJ9 461 aa10.28□□□□□ -0.76
SSBP2-202ENST00000504136 FAM109BQ6ICB4 259 aaPredicted RBP10.28□□□□□ -0.76
SSBP2-202ENST00000504136 KIAA1211Q6ZU35 1233 aa10.28□□□□□ -0.76
SSBP2-202ENST00000504136 SGMS1Q86VZ5 419 aa10.28□□□□□ -0.76
SSBP2-202ENST00000504136 TMTC2Q8N394 836 aa10.28□□□□□ -0.76
SSBP2-202ENST00000504136 NSUN6Q8TEA1 469 aaKnown RBP10.28□□□□□ -0.76
SSBP2-202ENST00000504136 TBC1D5Q92609 795 aa10.28□□□□□ -0.76
SSBP2-202ENST00000504136 KCNB2Q92953 911 aa10.28□□□□□ -0.76
SSBP2-202ENST00000504136 WDR11Q9BZH6 1224 aa10.28□□□□□ -0.76
SSBP2-202ENST00000504136 AP5M1Q9H0R1 490 aa10.28□□□□□ -0.76
SSBP2-202ENST00000504136 AAASQ9NRG9 546 aa10.28□□□□□ -0.76
SSBP2-202ENST00000504136 BAZ2BQ9UIF8 2168 aaKnown RBP10.28□□□□□ -0.76
SSBP2-202ENST00000504136 PNMA6FA0A0J9YX94 578 aa10.27□□□□□ -0.77
SSBP2-202ENST00000504136 ST8SIA5O15466 376 aa10.27□□□□□ -0.77
SSBP2-202ENST00000504136 DYNC1LI2O43237 492 aaPredicted RBP10.27□□□□□ -0.77
SSBP2-202ENST00000504136 ZEB2O60315 1214 aa10.27□□□□□ -0.77
SSBP2-202ENST00000504136 PQBP1O60828 265 aaKnown RBP10.27□□□□□ -0.77
SSBP2-202ENST00000504136 NR3C2P08235 984 aa10.27□□□□□ -0.77
SSBP2-202ENST00000504136 PTGS1P23219 599 aa10.27□□□□□ -0.77
SSBP2-202ENST00000504136 MCM5P33992 734 aa10.27□□□□□ -0.77
SSBP2-202ENST00000504136 PURAQ00577 322 aaKnown RBP10.27□□□□□ -0.77
SSBP2-202ENST00000504136 BEX3Q00994 111 aa10.27□□□□□ -0.77
SSBP2-202ENST00000504136 NNTQ13423 1086 aa10.27□□□□□ -0.77
SSBP2-202ENST00000504136 ARID5BQ14865 1188 aa10.27□□□□□ -0.77
SSBP2-202ENST00000504136 CTC1Q2NKJ3 1217 aa10.27□□□□□ -0.77
SSBP2-202ENST00000504136 CXCL17Q6UXB2 119 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms