RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 CLUAP1Q96AJ1 413 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 VWCEQ96DN2 955 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 TRIM11Q96F44 468 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 FBXL18Q96ME1 805 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 DNAJC2Q99543 621 aaKnown RBP4.39□□□□□ -1.71
USP46-205ENST00000504078 NOC4LQ9BVI4 516 aaKnown RBP4.39□□□□□ -1.71
USP46-205ENST00000504078 EHD4Q9H223 541 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 MTIF3Q9H2K0 278 aaKnown RBP4.39□□□□□ -1.71
USP46-205ENST00000504078 MROH8Q9H579 483 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 VCPKMTQ9H867 229 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 ARMT1Q9H993 441 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 ARHGEF10LQ9HCE6 1279 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 RAVER2Q9HCJ3 691 aaKnown RBP4.39□□□□□ -1.71
USP46-205ENST00000504078 GINM1Q9NU53 330 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 TRMT13Q9NUP7 481 aaKnown RBP4.39□□□□□ -1.71
USP46-205ENST00000504078 NDFIP2Q9NV92 336 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 ZNF214Q9UL59 606 aaPredicted RBP4.39□□□□□ -1.71
USP46-205ENST00000504078 FAM184BQ9ULE4 1060 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 GRIN2DO15399 1336 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 SIP14410 1827 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 H3BQ06 376 aaPredicted RBP4.38□□□□□ -1.71
USP46-205ENST00000504078 VWA5AO00534 786 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 WDR46O15213 610 aaKnown RBP4.38□□□□□ -1.71
USP46-205ENST00000504078 STRNO43815 780 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 DUSP11O75319 330 aaKnown RBP4.38□□□□□ -1.71
USP46-205ENST00000504078 BCAR3O75815 825 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 MBD4O95243 580 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 CD4P01730 458 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 EEF2P13639 858 aaKnown RBP4.38□□□□□ -1.71
USP46-205ENST00000504078 STAT3P40763 770 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 CDK7P50613 346 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 SNAP25P60880 206 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 DEFB103AP81534 67 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 CNTN2Q02246 1040 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 GABPAQ06546 454 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 ITGA7Q13683 1181 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 ACVR2BQ13705 512 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 CLUL1Q15846 466 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 PRRT3Q5FWE3 981 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 TMEM67Q5HYA8 995 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 CCDC158Q5M9N0 1113 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 TMEM179Q6ZVK1 233 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 TTC6Q86TZ1 520 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 SIAH1Q8IUQ4 282 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 CCDC144CPQ8IYA2 1237 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 ABRAQ8N0Z2 381 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 LRRC47Q8N1G4 583 aaKnown RBP4.38□□□□□ -1.71
USP46-205ENST00000504078 MB21D1Q8N884 522 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 DDX11Q96FC9 970 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 TOX2Q96NM4 488 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 NACC1Q96RE7 527 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 RIOK1Q9BRS2 568 aaKnown RBP4.38□□□□□ -1.71
USP46-205ENST00000504078 UPF3AQ9H1J1 476 aaKnown RBP4.38□□□□□ -1.71
USP46-205ENST00000504078 UBE2ZQ9H832 354 aaPredicted RBP4.38□□□□□ -1.71
USP46-205ENST00000504078 SPC25Q9HBM1 224 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 GPAMQ9HCL2 828 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 AVENQ9NQS1 362 aaPredicted RBP4.38□□□□□ -1.71
USP46-205ENST00000504078 PDGFCQ9NRA1 345 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 PPP1R9AQ9ULJ8 1098 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 MTMR7Q9Y216 660 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 PCDHA11Q9Y5I1 949 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 ZNF536O15090 1300 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 ATG2AQ2TAZ0 1938 aa4.38□□□□□ -1.71
USP46-205ENST00000504078 GREB1LQ9C091 1923 aaPredicted RBP4.38□□□□□ -1.71
USP46-205ENST00000504078 PRRC2BQ5JSZ5 2229 aaKnown RBP4.38□□□□□ -1.71
USP46-205ENST00000504078 MYH4Q9Y623 1939 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 PRR33A8MZF0 331 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 LPXNO60711 386 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 GPR37L1O60883 481 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 SLC25A27O95847 323 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 MYL3P08590 195 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 PDE6AP16499 860 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 CST5P28325 142 aaPredicted RBP4.37□□□□□ -1.71
USP46-205ENST00000504078 ADH6P28332 368 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 GJA9P57773 515 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 FSCN1Q16658 493 aaKnown RBP4.37□□□□□ -1.71
USP46-205ENST00000504078 TCTN1Q2MV58 587 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 HFE2Q6ZVN8 426 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 AACSQ86V21 672 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 HERC6Q8IVU3 1022 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 GJD3Q8N144 294 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 ANKRD35Q8N283 1001 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 PCSK9Q8NBP7 692 aaKnown RBP4.37□□□□□ -1.71
USP46-205ENST00000504078 PRSS33Q8NF86 280 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 FRAT1Q92837 279 aaPredicted RBP4.37□□□□□ -1.71
USP46-205ENST00000504078 ABHD17AQ96GS6 310 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 SLF1Q9BQI6 1058 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 TEX13BQ9BXU2 312 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 CRNKL1Q9BZJ0 848 aaKnown RBP4.37□□□□□ -1.71
USP46-205ENST00000504078 API5Q9BZZ5 524 aaKnown RBP4.37□□□□□ -1.71
USP46-205ENST00000504078 FTOQ9C0B1 505 aaKnown RBP eCLIP4.37□□□□□ -1.71
USP46-205ENST00000504078 KATNBL1Q9H079 304 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 IL1RAPL2Q9NP60 686 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 HOXC10Q9NYD6 342 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 NRBP1Q9UHY1 535 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 EXOC6BQ9Y2D4 811 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 TMX2Q9Y320 296 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 CTDP1Q9Y5B0 961 aaPredicted RBP4.37□□□□□ -1.71
USP46-205ENST00000504078 GTF3C3Q9Y5Q9 886 aa4.37□□□□□ -1.71
USP46-205ENST00000504078 ELP1O95163 1332 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms