RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 SYT2Q8N9I0 419 aaPredicted RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 EIF1ADQ8N9N8 165 aaKnown RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 SUPT20HQ8NEM7 779 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 FAM71BQ8TC56 605 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 LRRC15Q8TF66 581 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 CRYGNQ8WXF5 182 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 BAP1Q92560 729 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 HAS1Q92839 578 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 CALR3Q96L12 384 aaKnown RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 GPR101Q96P66 508 aaPredicted RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 PLIN2Q99541 437 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 POLR3CQ9BUI4 534 aaPredicted RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 TRIM34Q9BYJ4 488 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 ANO3Q9BYT9 981 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 IFIH1Q9BYX4 1025 aaKnown RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 CPVLQ9H3G5 476 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 DEF6Q9H4E7 631 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 SH2D4AQ9H788 454 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 MMRN2Q9H8L6 949 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 EHMT1Q9H9B1 1298 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 TUFT1Q9NNX1 390 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 PLCB1Q9NQ66 1216 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 DDX4Q9NQI0 724 aaKnown RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 EMILIN3Q9NT22 766 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 AIPL1Q9NZN9 384 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 KCND2Q9NZV8 630 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 ARHGAP20Q9P2F6 1191 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 HERC5Q9UII4 1024 aaKnown RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 DNM3Q9UQ16 869 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 MTMR7Q9Y216 660 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 TRAF3IP3Q9Y228 551 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 RABGAP1Q9Y3P9 1069 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 HYOU1Q9Y4L1 999 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 PCDHA13Q9Y5I0 950 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 PCDHA1Q9Y5I3 950 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 CACNA1AO00555 2505 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 RGPD3A6NKT7 1758 aaPredicted RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 RGPD4Q7Z3J3 1758 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 MYH7BA7E2Y1 1941 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 UBE4BO95155 1302 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 A0A0U1RQJ8 604 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 GRID2IPA4D2P6 1211 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 POTEMA6NI47 508 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 SPDYE3A6NKU9 549 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 USP17L10C9JJH3 530 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 F5H6K3 240 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 MPHOSPH10O00566 681 aaKnown RBP4.29□□□□□ -1.72
ALYREF-201ENST00000504015 MEIS2O14770 477 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 RIMBP2O15034 1052 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 EIF3DO15371 548 aaKnown RBP eCLIP4.29□□□□□ -1.72
ALYREF-201ENST00000504015 SLC16A3O15427 465 aaKnown RBP4.29□□□□□ -1.72
ALYREF-201ENST00000504015 CALUO43852 315 aaPredicted RBP4.29□□□□□ -1.72
ALYREF-201ENST00000504015 COBLO75128 1261 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 RPS6KA5O75582 802 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 SASH3O75995 380 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 SEC31AO94979 1220 aaKnown RBP4.29□□□□□ -1.72
ALYREF-201ENST00000504015 ABL1P00519 1130 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 ATP1A1P05023 1023 aaKnown RBP4.29□□□□□ -1.72
ALYREF-201ENST00000504015 KRT18P05783 430 aaKnown RBP4.29□□□□□ -1.72
ALYREF-201ENST00000504015 IVLP07476 585 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 EEF2P13639 858 aaKnown RBP4.29□□□□□ -1.72
ALYREF-201ENST00000504015 CYP11B2P19099 503 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 TNFRSF8P28908 595 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 EIF4A3P38919 411 aaKnown RBP4.29□□□□□ -1.72
ALYREF-201ENST00000504015 PRKCIP41743 596 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 SLC12A3P55017 1021 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 ARHGAP4P98171 946 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 APBA1Q02410 837 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 KLRC3Q07444 240 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 KCNMA1Q12791 1236 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 NNTQ13423 1086 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 MYBPC2Q14324 1141 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 NAB2Q15742 525 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 CLUL1Q15846 466 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 SLC15A2Q16348 729 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 CDC37Q16543 378 aaPredicted RBP4.29□□□□□ -1.72
ALYREF-201ENST00000504015 SLC18A3Q16572 532 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 UBE2SQ16763 222 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 KNOP1Q1ED39 458 aaKnown RBP4.29□□□□□ -1.72
ALYREF-201ENST00000504015 BMT2Q1RMZ1 405 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 ABCB5Q2M3G0 1257 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 QRICH1Q2TAL8 776 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 HERC4Q5GLZ8 1057 aaPredicted RBP4.29□□□□□ -1.72
ALYREF-201ENST00000504015 MUM1L1Q5H9M0 696 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 DACT2Q5SW24 774 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 FAM83BQ5T0W9 1011 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 RBM26Q5T8P6 1007 aaKnown RBP4.29□□□□□ -1.72
ALYREF-201ENST00000504015 SFMBT2Q5VUG0 894 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 SLFN13Q68D06 897 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 NCAPH2Q6IBW4 605 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 TTBK2Q6IQ55 1244 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 PDXDC1Q6P996 788 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 CCNI2Q6ZMN8 369 aaPredicted RBP4.29□□□□□ -1.72
ALYREF-201ENST00000504015 RRAGAQ7L523 313 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 EPM2AIP1Q7L775 607 aaPredicted RBP4.29□□□□□ -1.72
ALYREF-201ENST00000504015 DYMQ7RTS9 669 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 KRT27Q7Z3Y8 459 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 GPBP1Q86WP2 473 aa4.29□□□□□ -1.72
ALYREF-201ENST00000504015 FBXO11Q86XK2 927 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms