RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 CATIPQ7Z7H3 387 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 FAM228AQ86W67 206 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 CCDC144CPQ8IYA2 1237 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 TTC30BQ8N4P2 665 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 TMEM87AQ8NBN3 555 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 HNRNPLLQ8WVV9 542 aaKnown RBP10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 RSPH1Q8WYR4 309 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 NEK1Q96PY6 1258 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 IL17RBQ9NRM6 502 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 CREBZFQ9NS37 354 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 MKS1Q9NXB0 559 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 TSPY2A6NKD2 308 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 CREB3O43889 395 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 CEP104O60308 925 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 N4BP1O75113 896 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 RPSAP08865 295 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 TSPY3P0CV98 308 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 TSPY8P0CW00 308 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 PTPRAP18433 802 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 SLC8A1P32418 973 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 TFAP4Q01664 338 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 CUL4BQ13620 913 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 FAM47AQ5JRC9 791 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 CYB5R4Q7L1T6 521 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 RALYLQ86SE5 291 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 HOOK3Q86VS8 718 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 CEP57L1Q8IYX8 460 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 CLMNQ96JQ2 1002 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 CABP5Q9NP86 173 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 TRMT1Q9NXH9 659 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 ZSWIM5Q9P217 1185 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 SPO11Q9Y5K1 396 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 CSADQ9Y600 493 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 LOC285556D6RIA3 1793 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 MYH4Q9Y623 1939 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 THSD7BQ9C0I4 1608 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 A6NHS1 94 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 RANBP6O60518 1105 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 PSMA5P28066 241 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 HUNKP57058 714 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 EXOSC10Q01780 885 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 SEPT2Q15019 361 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 GJC2Q5T442 439 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 ERO1BQ86YB8 467 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 RNF168Q8IYW5 571 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 TSC22D3Q99576 134 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 WDR18Q9BV38 432 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 ZWILCHQ9H900 591 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 KANSL2Q9H9L4 492 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 ZSWIM6Q9HCJ5 1215 aa10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 MAGEC2Q9UBF1 373 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 FBXO9Q9UK97 447 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-207ENST00000503974 USP17L5A8MUK1 530 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 USP11P51784 963 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 PPATQ06203 517 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 FAAH2Q6GMR7 532 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 SEPT14Q6ZU15 432 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 SIAH1Q8IUQ4 282 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 FBXL16Q8N461 479 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 ANKK1Q8NFD2 765 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 ANKS1AQ92625 1134 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 CEP95Q96GE4 821 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 JAKMIP1Q96N16 626 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 SPAG5Q96R06 1193 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 SEZ6LQ9BYH1 1024 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 ZCWPW1Q9H0M4 648 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 MTMR4Q9NYA4 1195 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 NYAP2Q9P242 653 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 TPCN1Q9ULQ1 816 aa10.6□□□□□ -0.71
PDLIM5-207ENST00000503974 RASSF10A6NK89 507 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 PARP1P09874 1014 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 DESP17661 470 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 COPB2P35606 906 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 CCZ1BP86790 482 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 CCZ1P86791 482 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 PPIL2Q13356 520 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 SEC23AQ15436 765 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 CCDC40Q4G0X9 1142 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 PABPC1LQ4VXU2 614 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 RSRC2Q7L4I2 434 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 DHX32Q7L7V1 743 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 DGKHQ86XP1 1220 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 RASAL3Q86YV0 1011 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 FAM76AQ8TAV0 307 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 CCDC47Q96A33 483 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 TMEM87BQ96K49 555 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 TTC14Q96N46 770 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 ZSCAN10Q96SZ4 725 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 AGXT2Q9BYV1 514 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 FAM204AQ9H8W3 233 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 ELP3Q9H9T3 547 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 HOXC10Q9NYD6 342 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 KCNH4Q9UQ05 1017 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 AFG3L2Q9Y4W6 797 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 TNKSO95271 1327 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 PHLPP2Q6ZVD8 1323 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 ZSCAN12O43309 604 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 CBFA2T2O43439 604 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 ZBTB48P10074 688 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms