RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 COL11A1P12107 1806 aaPredicted RBP9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 NFASCO94856 1347 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 ASB14A6NK59 587 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 PP2D1A8MPX8 630 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 DKC1O60832 514 aaKnown RBP eCLIP9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 ALDH1A1P00352 501 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 TGFB3P10600 412 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 CYP2C8P10632 490 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 EDNRBP24530 442 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 CDC25AP30304 524 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 MAPK4P31152 587 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 ICAM3P32942 547 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 ZNF165P49910 485 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 ALDH5A1P51649 535 aaPredicted RBP9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 JAK3P52333 1124 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 UBXN2AP68543 259 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 MRPS9P82933 396 aaKnown RBP9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 KRT76Q01546 638 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 DPYDQ12882 1025 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 MKRN3Q13064 507 aaKnown RBP9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 GRB10Q13322 594 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 PNOCQ13519 176 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 KCNB1Q14721 858 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 EPHA7Q15375 998 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 Q3C1V9 767 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 NCAPH2Q6IBW4 605 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 CNNM4Q6P4Q7 775 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 POTEEQ6S8J3 1075 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 FAM43AQ8N2R8 423 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 FAM133AQ8N9E0 248 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 MLKLQ8NB16 471 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 GIMAP8Q8ND71 665 aaPredicted RBP9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 CYP2W1Q8TAV3 490 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 LARP4BQ92615 738 aaKnown RBP9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 C7orf25Q9BPX7 421 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 SENP7Q9BQF6 1050 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 BPIFA3Q9BQP9 254 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 AGO4Q9HCK5 861 aaKnown RBP9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 VAV3Q9UKW4 847 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 ABT1Q9ULW3 272 aaKnown RBP9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 DNM3Q9UQ16 869 aa9.11□□□□□ -0.95
TOPBP1-202ENST00000503338 DNAJC25-GNG10A0A024R161 153 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 PVALEFA0A1B0GWK0 134 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 SMTNL1A8MU46 457 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 BECN2A8MW95 431 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 GOLGA6L19H0YKK7 550 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 ARP10275 920 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 AFMP43652 599 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 TPM4P67936 248 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 PDE4DQ08499 809 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 ANO6Q4KMQ2 910 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 NAALADL2Q58DX5 795 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 WDR78Q5VTH9 848 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 ZNF746Q6NUN9 644 aaPredicted RBP9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 B3GNT9Q6UX72 402 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 MIER3Q7Z3K6 550 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 ZNF467Q7Z7K2 595 aaPredicted RBP9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 SMAP1Q8IYB5 467 aaPredicted RBP9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 ANKRD13CQ8N6S4 541 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 IL31RAQ8NI17 732 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 RAD54LQ92698 747 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 PTPN18Q99952 460 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 EIF2AK1Q9BQI3 630 aaKnown RBP9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 RBSNQ9H1K0 784 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 ZFYVE28Q9HCC9 887 aa9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 DIS3Q9Y2L1 958 aaKnown RBP9.1□□□□□ -0.95
TOPBP1-202ENST00000503338 WDR64B1ANS9 1081 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 SPATA31C2B4DYI2 1134 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 P4HBP07237 508 aaKnown RBP9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 TM4SF4P48230 202 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 NOGQ13253 232 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 STIM1Q13586 685 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 MORC3Q14149 939 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 NEDD9Q14511 834 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 TAF1CQ15572 869 aaPredicted RBP9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 CATSPER3Q86XQ3 398 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 IFNL1Q8IU54 200 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 MSL3Q8N5Y2 521 aaKnown RBP9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 MORC4Q8TE76 937 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 PNMA5Q96PV4 448 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 NACC1Q96RE7 527 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 HSD17B14Q9BPX1 270 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 TRIM9Q9C026 710 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 DNAJC25Q9H1X3 360 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 ZSWIM4Q9H7M6 989 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 BLOC1S4Q9NUP1 217 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 KCND2Q9NZV8 630 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 MAN1B1Q9UKM7 699 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 KIAA1024Q9UPX6 916 aa9.09□□□□□ -0.95
TOPBP1-202ENST00000503338 SOWAHBA6NEL2 793 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 SLC15A5A6NIM6 579 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 FAM155AB1AL88 458 aaPredicted RBP9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 IKBKBO14920 756 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 FOXN1O15353 648 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 DHX15O43143 795 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 TLR2O60603 784 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 MED24O75448 989 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 RHOBTB3O94955 611 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 LYPLA2O95372 231 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 EYA4O95677 639 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms